RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
LPCAT2-208ENST00000566915 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
LPCAT2-208ENST00000566915 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
LPCAT2-208ENST00000566915 DNAH9Q9NYC9 4486 aa2.16□□□□□ -2.06
LPCAT2-208ENST00000566915 TENM3Q9P273 2699 aa2.16□□□□□ -2.06
LPCAT2-208ENST00000566915 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.14□□□□□ -2.07
LPCAT2-208ENST00000566915 PKD1L1Q8TDX9 2849 aa2.14□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
LPCAT2-208ENST00000566915 VPS13DQ5THJ4 4388 aa2.13□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP12-2P59991 146 aa2.13□□□□□ -2.07
LPCAT2-208ENST00000566915 PKHD1P08F94 4074 aa2.13□□□□□ -2.07
LPCAT2-208ENST00000566915 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
LPCAT2-208ENST00000566915 TGP01266 2768 aa2.12□□□□□ -2.07
LPCAT2-208ENST00000566915 KMT2AQ03164 3969 aa2.12□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP4-8Q9BYQ9 185 aa2.12□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP3-1Q9BYR8 98 aa2.12□□□□□ -2.07
LPCAT2-208ENST00000566915 VWFP04275 2813 aa2.12□□□□□ -2.07
LPCAT2-208ENST00000566915 TENM1Q9UKZ4 2725 aa2.11□□□□□ -2.07
LPCAT2-208ENST00000566915 VPS13BQ7Z7G8 4022 aa2.11□□□□□ -2.07
LPCAT2-208ENST00000566915 HUWE1Q7Z6Z7 4374 aaKnown RBP2.11□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP10-4P60372 401 aaPredicted RBP2.1□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP10-6P60371 365 aaPredicted RBP2.09□□□□□ -2.07
LPCAT2-208ENST00000566915 KRTAP9-2Q9BYQ4 174 aa2.09□□□□□ -2.07
LPCAT2-208ENST00000566915 PKD1P98161 4303 aa2.08□□□□□ -2.08
LPCAT2-208ENST00000566915 DNAH10Q8IVF4 4471 aa2.07□□□□□ -2.08
LPCAT2-208ENST00000566915 DNAH2Q9P225 4427 aa2.07□□□□□ -2.08
LPCAT2-208ENST00000566915 KRTAP23-1A1A580 65 aa2.07□□□□□ -2.08
LPCAT2-208ENST00000566915 INE1O15225 51 aa2.07□□□□□ -2.08
LPCAT2-208ENST00000566915 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
LPCAT2-208ENST00000566915 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
LPCAT2-208ENST00000566915 PKHD1L1Q86WI1 4243 aa2.06□□□□□ -2.08
LPCAT2-208ENST00000566915 FAT2Q9NYQ8 4349 aa2.06□□□□□ -2.08
LPCAT2-208ENST00000566915 MEGF8Q7Z7M0 2845 aa2.05□□□□□ -2.08
LPCAT2-208ENST00000566915 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
LPCAT2-208ENST00000566915 KRTAP15-1Q3LI76 137 aa2.04□□□□□ -2.08
LPCAT2-208ENST00000566915 DNAH8Q96JB1 4490 aa2.04□□□□□ -2.08
LPCAT2-208ENST00000566915 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
LPCAT2-208ENST00000566915 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
LPCAT2-208ENST00000566915 COL7A1Q02388 2944 aa2.03□□□□□ -2.08
LPCAT2-208ENST00000566915 DNAH17Q9UFH2 4485 aa2.03□□□□□ -2.08
LPCAT2-208ENST00000566915 DNHD1Q96M86 4753 aa2.03□□□□□ -2.08
LPCAT2-208ENST00000566915 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
LPCAT2-208ENST00000566915 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
LPCAT2-208ENST00000566915 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
LPCAT2-208ENST00000566915 PLECQ15149 4684 aaKnown RBP1.98□□□□□ -2.09
LPCAT2-208ENST00000566915 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
LPCAT2-208ENST00000566915 LRP1BQ9NZR2 4599 aa1.97□□□□□ -2.09
LPCAT2-208ENST00000566915 STARD9Q9P2P6 4700 aa1.96□□□□□ -2.1
LPCAT2-208ENST00000566915 DYNC1H1Q14204 4646 aaKnown RBP1.95□□□□□ -2.1
LPCAT2-208ENST00000566915 HYDINQ4G0P3 5121 aa1.94□□□□□ -2.1
LPCAT2-208ENST00000566915 HSPG2P98160 4391 aa1.93□□□□□ -2.1
LPCAT2-208ENST00000566915 DNAH5Q8TE73 4624 aa1.93□□□□□ -2.1
LPCAT2-208ENST00000566915 TNXBP22105 4242 aa1.93□□□□□ -2.1
LPCAT2-208ENST00000566915 KRTAP9-3Q9BYQ3 159 aa1.93□□□□□ -2.1
LPCAT2-208ENST00000566915 SACSQ9NZJ4 4579 aa1.92□□□□□ -2.1
LPCAT2-208ENST00000566915 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
LPCAT2-208ENST00000566915 RYR2Q92736 4967 aa1.91□□□□□ -2.1
LPCAT2-208ENST00000566915 KRTAP10-12P60413 245 aa1.91□□□□□ -2.1
LPCAT2-208ENST00000566915 MYCBP2O75592 4640 aa1.9□□□□□ -2.11
LPCAT2-208ENST00000566915 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
LPCAT2-208ENST00000566915 HERC1Q15751 4861 aa1.87□□□□□ -2.11
LPCAT2-208ENST00000566915 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
LPCAT2-208ENST00000566915 KRTAP4-8A0A0G2JLE6 195 aa1.86□□□□□ -2.11
LPCAT2-208ENST00000566915 RYR1P21817 5038 aa1.86□□□□□ -2.11
LPCAT2-208ENST00000566915 KRTAP19-4Q3LI73 84 aa1.85□□□□□ -2.11
LPCAT2-208ENST00000566915 MT1HP80294 61 aa1.84□□□□□ -2.11
LPCAT2-208ENST00000566915 HERC2O95714 4834 aa1.84□□□□□ -2.11
LPCAT2-208ENST00000566915 APOBP04114 4563 aaKnown RBP1.83□□□□□ -2.12
LPCAT2-208ENST00000566915 SRRM2Q9UQ35 2752 aaKnown RBP1.82□□□□□ -2.12
LPCAT2-208ENST00000566915 RYR3Q15413 4870 aa1.82□□□□□ -2.12
LPCAT2-208ENST00000566915 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
LPCAT2-208ENST00000566915 KRTAP4-7Q9BYR0 210 aa1.81□□□□□ -2.12
LPCAT2-208ENST00000566915 PCLOQ9Y6V0 5065 aa1.8□□□□□ -2.12
LPCAT2-208ENST00000566915 FAT1Q14517 4588 aa1.79□□□□□ -2.12
LPCAT2-208ENST00000566915 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
LPCAT2-208ENST00000566915 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
LPCAT2-208ENST00000566915 SPRR2GQ9BYE4 73 aa1.77□□□□□ -2.13
LPCAT2-208ENST00000566915 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
LPCAT2-208ENST00000566915 KIAA1109Q2LD37 5005 aa1.77□□□□□ -2.13
LPCAT2-208ENST00000566915 MT2AP02795 61 aa1.75□□□□□ -2.13
LPCAT2-208ENST00000566915 LPAP08519 4548 aa1.75□□□□□ -2.13
LPCAT2-208ENST00000566915 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
LPCAT2-208ENST00000566915 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
LPCAT2-208ENST00000566915 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
LPCAT2-208ENST00000566915 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
LPCAT2-208ENST00000566915 LCE5AQ5TCM9 118 aa1.73□□□□□ -2.13
LPCAT2-208ENST00000566915 LCE1DQ5T752 114 aa1.71□□□□□ -2.14
LPCAT2-208ENST00000566915 KMT2CQ8NEZ4 4911 aaKnown RBP1.7□□□□□ -2.14
LPCAT2-208ENST00000566915 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
LPCAT2-208ENST00000566915 MT1FP04733 61 aa1.69□□□□□ -2.14
LPCAT2-208ENST00000566915 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
LPCAT2-208ENST00000566915 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
LPCAT2-208ENST00000566915 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
LPCAT2-208ENST00000566915 EPPK1P58107 5090 aaKnown RBP1.67□□□□□ -2.14
LPCAT2-208ENST00000566915 LCE3CQ5T5A8 94 aa1.66□□□□□ -2.14
LPCAT2-208ENST00000566915 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
LPCAT2-208ENST00000566915 KRTAP10-5P60370 271 aa1.66□□□□□ -2.14
LPCAT2-208ENST00000566915 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms