RNA–Protein interactions for RNA: ENST00000566617.1

COX4I1-212, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-212ENST00000566617 USH2AO75445 5202 aa13.15□□□□□ -0.3
COX4I1-212ENST00000566617 SMIM20Q8N5G0 67 aa13.08□□□□□ -0.32
COX4I1-212ENST00000566617 FAM236AA0A1B0GUQ0 79 aa13.02□□□□□ -0.33
COX4I1-212ENST00000566617 FAM236BA0A1B0GV22 79 aa13.02□□□□□ -0.33
COX4I1-212ENST00000566617 TRAV7A0A075B6U4 112 aa13□□□□□ -0.33
COX4I1-212ENST00000566617 NDUFC1O43677 76 aa12.99□□□□□ -0.33
COX4I1-212ENST00000566617 SSPOA2VEC9 5147 aa12.98□□□□□ -0.33
COX4I1-212ENST00000566617 KRTAP19-1Q8IUB9 90 aa12.89□□□□□ -0.35
COX4I1-212ENST00000566617 DMAC1Q96GE9 116 aa12.88□□□□□ -0.35
COX4I1-212ENST00000566617 H0YAA0 97 aa12.86□□□□□ -0.35
COX4I1-212ENST00000566617 SPRR2GQ9BYE4 73 aa12.83□□□□□ -0.36
COX4I1-212ENST00000566617 KRTAP19-6Q3LI70 58 aa12.81□□□□□ -0.36
COX4I1-212ENST00000566617 CRIPTQ9P021 101 aa12.78□□□□□ -0.36
COX4I1-212ENST00000566617 KRTAP19-8Q3LI54 63 aa12.69□□□□□ -0.38
COX4I1-212ENST00000566617 SERP2Q8N6R1 65 aa12.69□□□□□ -0.38
COX4I1-212ENST00000566617 ACYP2P14621 99 aa12.65□□□□□ -0.38
COX4I1-212ENST00000566617 SNURFQ9Y675 71 aa12.63□□□□□ -0.39
COX4I1-212ENST00000566617 FCGBPQ9Y6R7 5405 aaPredicted RBP12.63□□□□□ -0.39
COX4I1-212ENST00000566617 Q5VV11 94 aa12.61□□□□□ -0.39
COX4I1-212ENST00000566617 ADM2Q7Z4H4 148 aa12.61□□□□□ -0.39
COX4I1-212ENST00000566617 MT1BP07438 61 aa12.59□□□□□ -0.39
COX4I1-212ENST00000566617 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.58□□□□□ -0.4
COX4I1-212ENST00000566617 C20orf197Q8N268 126 aa12.56□□□□□ -0.4
COX4I1-212ENST00000566617 SPANXA2-OT1Q8N9U9 137 aa12.53□□□□□ -0.4
COX4I1-212ENST00000566617 SPTSSBQ8NFR3 76 aa12.44□□□□□ -0.42
COX4I1-212ENST00000566617 COX7CP15954 63 aa12.39□□□□□ -0.43
COX4I1-212ENST00000566617 P0C880 135 aa12.38□□□□□ -0.43
COX4I1-212ENST00000566617 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
COX4I1-212ENST00000566617 CHKB-CPT1BH3BT56 60 aa12.34□□□□□ -0.43
COX4I1-212ENST00000566617 KRTAP9-7A8MTY7 169 aa12.31□□□□□ -0.44
COX4I1-212ENST00000566617 A6NN06 94 aa12.29□□□□□ -0.44
COX4I1-212ENST00000566617 R4GN34 69 aa12.29□□□□□ -0.44
COX4I1-212ENST00000566617 KRTAP10-5P60370 271 aa12.26□□□□□ -0.45
COX4I1-212ENST00000566617 MACF1Q9UPN3 7388 aaKnown RBP12.21□□□□□ -0.45
COX4I1-212ENST00000566617 M0QZ58 72 aa12.18□□□□□ -0.46
COX4I1-212ENST00000566617 H7BZZ5 65 aa12.12□□□□□ -0.47
COX4I1-212ENST00000566617 ANAPC13Q9BS18 74 aa12.08□□□□□ -0.48
COX4I1-212ENST00000566617 COA5Q86WW8 74 aa12.07□□□□□ -0.48
COX4I1-212ENST00000566617 PLAC4Q8WY50 150 aa12.07□□□□□ -0.48
COX4I1-212ENST00000566617 CYSTM1Q9H1C7 97 aa12.07□□□□□ -0.48
COX4I1-212ENST00000566617 SYNE2Q8WXH0 6885 aaKnown RBP11.95□□□□□ -0.5
COX4I1-212ENST00000566617 PRO2289Q9P1D8 64 aa11.94□□□□□ -0.5
COX4I1-212ENST00000566617 KRTAP6-3Q3LI67 103 aa11.93□□□□□ -0.5
COX4I1-212ENST00000566617 LINC01554Q52M75 96 aa11.93□□□□□ -0.5
COX4I1-212ENST00000566617 MT1XP80297 61 aa11.89□□□□□ -0.51
COX4I1-212ENST00000566617 CCDC179H3BU77 68 aa11.81□□□□□ -0.52
COX4I1-212ENST00000566617 SEC61GP60059 68 aa11.77□□□□□ -0.53
COX4I1-212ENST00000566617 SERP1Q9Y6X1 66 aa11.73□□□□□ -0.53
COX4I1-212ENST00000566617 KRTAP13-4Q3LI77 160 aa11.7□□□□□ -0.54
COX4I1-212ENST00000566617 ATP5EP56381 51 aaPredicted RBP11.66□□□□□ -0.54
COX4I1-212ENST00000566617 KRTAP12-2P59991 146 aa11.6□□□□□ -0.55
COX4I1-212ENST00000566617 KRTAP5-9P26371 169 aa11.56□□□□□ -0.56
COX4I1-212ENST00000566617 A0A1B0GU33 70 aa11.53□□□□□ -0.56
COX4I1-212ENST00000566617 A0A1B0GU69 56 aa11.47□□□□□ -0.57
COX4I1-212ENST00000566617 TMEM258P61165 79 aa11.46□□□□□ -0.57
COX4I1-212ENST00000566617 SPATA8Q6RVD6 105 aa11.41□□□□□ -0.58
COX4I1-212ENST00000566617 KRTAP10-12P60413 245 aa11.34□□□□□ -0.59
COX4I1-212ENST00000566617 CAMK2N1Q7Z7J9 78 aa11.33□□□□□ -0.6
COX4I1-212ENST00000566617 A0A0D9SG42 100 aa11.32□□□□□ -0.6
COX4I1-212ENST00000566617 KRTAP10-7P60409 375 aaPredicted RBP11.32□□□□□ -0.6
COX4I1-212ENST00000566617 KRTAP8-1Q8IUC2 63 aa11.3□□□□□ -0.6
COX4I1-212ENST00000566617 KMT2DO14686 5537 aa11.28□□□□□ -0.6
COX4I1-212ENST00000566617 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
COX4I1-212ENST00000566617 LINC01558Q9Y6Z2 57 aa11.24□□□□□ -0.61
COX4I1-212ENST00000566617 KRTAP4-8A0A0G2JLE6 195 aa11.23□□□□□ -0.61
COX4I1-212ENST00000566617 KRTAP4-8Q9BYQ9 185 aa11.23□□□□□ -0.61
COX4I1-212ENST00000566617 MUC12Q9UKN1 5478 aa11.23□□□□□ -0.61
COX4I1-212ENST00000566617 SMIM26A0A096LP01 95 aa11.22□□□□□ -0.61
COX4I1-212ENST00000566617 SPRR2FQ96RM1 72 aa11.21□□□□□ -0.61
COX4I1-212ENST00000566617 NEBP20929 6669 aa11.2□□□□□ -0.62
COX4I1-212ENST00000566617 KRTAP12-1P59990 96 aa11.19□□□□□ -0.62
COX4I1-212ENST00000566617 SPINT4Q6UDR6 99 aa11.17□□□□□ -0.62
COX4I1-212ENST00000566617 A8MU10 97 aa11.04□□□□□ -0.64
COX4I1-212ENST00000566617 SPRR2EP22531 72 aa10.95□□□□□ -0.66
COX4I1-212ENST00000566617 SPRR2BP35325 72 aa10.95□□□□□ -0.66
COX4I1-212ENST00000566617 SPRR2AP35326 72 aa10.95□□□□□ -0.66
COX4I1-212ENST00000566617 MDN1Q9NU22 5596 aa10.93□□□□□ -0.66
COX4I1-212ENST00000566617 LCE1AQ5T7P2 110 aa10.91□□□□□ -0.66
COX4I1-212ENST00000566617 UQCR11O14957 56 aa10.9□□□□□ -0.66
COX4I1-212ENST00000566617 KRTAP20-1Q3LI63 56 aa10.82□□□□□ -0.68
COX4I1-212ENST00000566617 V9GYY9 64 aa10.82□□□□□ -0.68
COX4I1-212ENST00000566617 Q1T7F1 81 aa10.75□□□□□ -0.69
COX4I1-212ENST00000566617 KRTAP2-3P0C7H8 128 aa10.69□□□□□ -0.7
COX4I1-212ENST00000566617 KRTAP2-4Q9BYR9 128 aa10.69□□□□□ -0.7
COX4I1-212ENST00000566617 C10orf95Q9H7T3 257 aa10.67□□□□□ -0.7
COX4I1-212ENST00000566617 MIR22HGQ0VDD5 57 aa10.65□□□□□ -0.7
COX4I1-212ENST00000566617 KRTAP19-7Q3SYF9 63 aa10.64□□□□□ -0.71
COX4I1-212ENST00000566617 PCP4P48539 62 aa10.63□□□□□ -0.71
COX4I1-212ENST00000566617 PSPHP1O15172 72 aa10.59□□□□□ -0.71
COX4I1-212ENST00000566617 TNP1P09430 55 aa10.59□□□□□ -0.71
COX4I1-212ENST00000566617 SPRR2DP22532 72 aa10.59□□□□□ -0.71
COX4I1-212ENST00000566617 RPS28P62857 69 aaKnown RBP10.54□□□□□ -0.72
COX4I1-212ENST00000566617 MT1EP04732 61 aa10.52□□□□□ -0.73
COX4I1-212ENST00000566617 KRTAP19-5Q3LI72 72 aa10.42□□□□□ -0.74
COX4I1-212ENST00000566617 K7ERS5 55 aa10.4□□□□□ -0.74
COX4I1-212ENST00000566617 KRTAP2-2Q9BYT5 123 aa10.38□□□□□ -0.75
COX4I1-212ENST00000566617 KRTAP2-1Q9BYU5 128 aa10.38□□□□□ -0.75
COX4I1-212ENST00000566617 LCE5AQ5TCM9 118 aa10.37□□□□□ -0.75
COX4I1-212ENST00000566617 KRTAP19-3Q7Z4W3 81 aa10.37□□□□□ -0.75
COX4I1-212ENST00000566617 LCE3AQ5TA76 89 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms