RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 KRTAP9-7A8MTY7 169 aa8.79□□□□□ -1
CCDC113-204ENST00000566498 MP68P56378 58 aa8.79□□□□□ -1
CCDC113-204ENST00000566498 OCR1Q9BZK8 76 aa8.78□□□□□ -1
CCDC113-204ENST00000566498 NDUFC1O43677 76 aa8.74□□□□□ -1.01
CCDC113-204ENST00000566498 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
CCDC113-204ENST00000566498 SCGB1A1P11684 91 aa8.72□□□□□ -1.01
CCDC113-204ENST00000566498 A8MUN3 132 aa8.7□□□□□ -1.02
CCDC113-204ENST00000566498 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
CCDC113-204ENST00000566498 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
CCDC113-204ENST00000566498 Q5VV11 94 aa8.66□□□□□ -1.02
CCDC113-204ENST00000566498 H3BPC8 53 aa8.63□□□□□ -1.03
CCDC113-204ENST00000566498 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
CCDC113-204ENST00000566498 MT1BP07438 61 aa8.6□□□□□ -1.03
CCDC113-204ENST00000566498 KRTAP19-8Q3LI54 63 aa8.6□□□□□ -1.03
CCDC113-204ENST00000566498 H0YAA0 97 aa8.56□□□□□ -1.04
CCDC113-204ENST00000566498 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
CCDC113-204ENST00000566498 ADM2Q7Z4H4 148 aa8.55□□□□□ -1.04
CCDC113-204ENST00000566498 MACF1Q9UPN3 7388 aaKnown RBP8.54□□□□□ -1.04
CCDC113-204ENST00000566498 A6NN06 94 aa8.54□□□□□ -1.04
CCDC113-204ENST00000566498 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
CCDC113-204ENST00000566498 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
CCDC113-204ENST00000566498 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
CCDC113-204ENST00000566498 KRTAP10-5P60370 271 aa8.41□□□□□ -1.06
CCDC113-204ENST00000566498 SYNE2Q8WXH0 6885 aaKnown RBP8.4□□□□□ -1.06
CCDC113-204ENST00000566498 KRTAP6-3Q3LI67 103 aa8.37□□□□□ -1.07
CCDC113-204ENST00000566498 ACYP2P14621 99 aa8.35□□□□□ -1.07
CCDC113-204ENST00000566498 C20orf197Q8N268 126 aa8.34□□□□□ -1.07
CCDC113-204ENST00000566498 P0C880 135 aa8.32□□□□□ -1.08
CCDC113-204ENST00000566498 R4GN34 69 aa8.32□□□□□ -1.08
CCDC113-204ENST00000566498 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
CCDC113-204ENST00000566498 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
CCDC113-204ENST00000566498 M0QZ58 72 aa8.25□□□□□ -1.09
CCDC113-204ENST00000566498 ANAPC13Q9BS18 74 aa8.25□□□□□ -1.09
CCDC113-204ENST00000566498 PCP4P48539 62 aa8.24□□□□□ -1.09
CCDC113-204ENST00000566498 SPTSSBQ8NFR3 76 aa8.24□□□□□ -1.09
CCDC113-204ENST00000566498 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
CCDC113-204ENST00000566498 CHKB-CPT1BH3BT56 60 aa8.21□□□□□ -1.1
CCDC113-204ENST00000566498 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
CCDC113-204ENST00000566498 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
CCDC113-204ENST00000566498 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
CCDC113-204ENST00000566498 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
CCDC113-204ENST00000566498 MT1XP80297 61 aa8.09□□□□□ -1.11
CCDC113-204ENST00000566498 COX7CP15954 63 aa8.06□□□□□ -1.12
CCDC113-204ENST00000566498 CCDC179H3BU77 68 aa8.03□□□□□ -1.12
CCDC113-204ENST00000566498 KRTAP5-9P26371 169 aa7.98□□□□□ -1.13
CCDC113-204ENST00000566498 COA5Q86WW8 74 aa7.9□□□□□ -1.14
CCDC113-204ENST00000566498 MUC12Q9UKN1 5478 aa7.89□□□□□ -1.15
CCDC113-204ENST00000566498 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
CCDC113-204ENST00000566498 KRTAP8-1Q8IUC2 63 aa7.85□□□□□ -1.15
CCDC113-204ENST00000566498 SPRR2FQ96RM1 72 aa7.85□□□□□ -1.15
CCDC113-204ENST00000566498 KMT2DO14686 5537 aa7.83□□□□□ -1.16
CCDC113-204ENST00000566498 NEBP20929 6669 aa7.82□□□□□ -1.16
CCDC113-204ENST00000566498 SEC61GP60059 68 aa7.81□□□□□ -1.16
CCDC113-204ENST00000566498 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
CCDC113-204ENST00000566498 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
CCDC113-204ENST00000566498 SERP1Q9Y6X1 66 aa7.78□□□□□ -1.16
CCDC113-204ENST00000566498 H7BZZ5 65 aa7.77□□□□□ -1.17
CCDC113-204ENST00000566498 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
CCDC113-204ENST00000566498 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
CCDC113-204ENST00000566498 TMEM258P61165 79 aa7.75□□□□□ -1.17
CCDC113-204ENST00000566498 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
CCDC113-204ENST00000566498 KRTAP20-1Q3LI63 56 aa7.73□□□□□ -1.17
CCDC113-204ENST00000566498 SPRR2EP22531 72 aa7.71□□□□□ -1.18
CCDC113-204ENST00000566498 SPRR2BP35325 72 aa7.71□□□□□ -1.18
CCDC113-204ENST00000566498 SPRR2AP35326 72 aa7.71□□□□□ -1.18
CCDC113-204ENST00000566498 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
CCDC113-204ENST00000566498 KRTAP10-12P60413 245 aa7.68□□□□□ -1.18
CCDC113-204ENST00000566498 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
CCDC113-204ENST00000566498 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
CCDC113-204ENST00000566498 A0A0D9SG42 100 aa7.64□□□□□ -1.19
CCDC113-204ENST00000566498 A0A1B0GU33 70 aa7.63□□□□□ -1.19
CCDC113-204ENST00000566498 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
CCDC113-204ENST00000566498 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
CCDC113-204ENST00000566498 KRTAP2-3P0C7H8 128 aa7.57□□□□□ -1.2
CCDC113-204ENST00000566498 KRTAP2-4Q9BYR9 128 aa7.57□□□□□ -1.2
CCDC113-204ENST00000566498 A0A1B0GU69 56 aa7.53□□□□□ -1.2
CCDC113-204ENST00000566498 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
CCDC113-204ENST00000566498 SPRR2DP22532 72 aa7.45□□□□□ -1.22
CCDC113-204ENST00000566498 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
CCDC113-204ENST00000566498 SMIM26A0A096LP01 95 aa7.41□□□□□ -1.22
CCDC113-204ENST00000566498 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
CCDC113-204ENST00000566498 A8MU10 97 aa7.34□□□□□ -1.23
CCDC113-204ENST00000566498 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
CCDC113-204ENST00000566498 KRTAP2-2Q9BYT5 123 aa7.33□□□□□ -1.24
CCDC113-204ENST00000566498 KRTAP2-1Q9BYU5 128 aa7.33□□□□□ -1.24
CCDC113-204ENST00000566498 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
CCDC113-204ENST00000566498 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
CCDC113-204ENST00000566498 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
CCDC113-204ENST00000566498 V9GYY9 64 aa7.18□□□□□ -1.26
CCDC113-204ENST00000566498 MT1EP04732 61 aa7.16□□□□□ -1.26
CCDC113-204ENST00000566498 Q1T7F1 81 aa7.12□□□□□ -1.27
CCDC113-204ENST00000566498 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
CCDC113-204ENST00000566498 KRTAP19-3Q7Z4W3 81 aa7.1□□□□□ -1.27
CCDC113-204ENST00000566498 C10orf95Q9H7T3 257 aa7.1□□□□□ -1.27
CCDC113-204ENST00000566498 TNP1P09430 55 aa7.09□□□□□ -1.27
CCDC113-204ENST00000566498 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
CCDC113-204ENST00000566498 UQCR11O14957 56 aa7.08□□□□□ -1.28
CCDC113-204ENST00000566498 PSPHP1O15172 72 aa7.07□□□□□ -1.28
CCDC113-204ENST00000566498 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
CCDC113-204ENST00000566498 MT1GP13640 62 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms