RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TMEM258P61165 79 aa4.66□□□□□ -1.66
CMTM3-209ENST00000565003 UBL5Q9BZL1 73 aa4.66□□□□□ -1.66
CMTM3-209ENST00000565003 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
CMTM3-209ENST00000565003 UQCRQO14949 82 aa4.64□□□□□ -1.67
CMTM3-209ENST00000565003 KRTAP3-1Q9BYR8 98 aa4.64□□□□□ -1.67
CMTM3-209ENST00000565003 ETDBQ3ZM63 59 aa4.62□□□□□ -1.67
CMTM3-209ENST00000565003 MT-ATP8P03928 68 aa4.61□□□□□ -1.67
CMTM3-209ENST00000565003 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
CMTM3-209ENST00000565003 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
CMTM3-209ENST00000565003 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
CMTM3-209ENST00000565003 C1orf64Q8NEQ6 169 aa4.58□□□□□ -1.68
CMTM3-209ENST00000565003 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
CMTM3-209ENST00000565003 S4R3F8 94 aa4.58□□□□□ -1.68
CMTM3-209ENST00000565003 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
CMTM3-209ENST00000565003 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
CMTM3-209ENST00000565003 LCA10Q71F78 164 aa4.56□□□□□ -1.68
CMTM3-209ENST00000565003 TP53AIP1Q9HCN2 124 aa4.56□□□□□ -1.68
CMTM3-209ENST00000565003 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
CMTM3-209ENST00000565003 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
CMTM3-209ENST00000565003 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
CMTM3-209ENST00000565003 MT1BP07438 61 aa4.53□□□□□ -1.68
CMTM3-209ENST00000565003 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
CMTM3-209ENST00000565003 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
CMTM3-209ENST00000565003 COX7CP15954 63 aa4.51□□□□□ -1.69
CMTM3-209ENST00000565003 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
CMTM3-209ENST00000565003 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
CMTM3-209ENST00000565003 CYP4F30PQ9H0H9 118 aa4.5□□□□□ -1.69
CMTM3-209ENST00000565003 Q5VV11 94 aa4.49□□□□□ -1.69
CMTM3-209ENST00000565003 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
CMTM3-209ENST00000565003 A0A087WVE0 104 aa4.48□□□□□ -1.69
CMTM3-209ENST00000565003 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
CMTM3-209ENST00000565003 A6NN06 94 aa4.48□□□□□ -1.69
CMTM3-209ENST00000565003 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
CMTM3-209ENST00000565003 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
CMTM3-209ENST00000565003 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
CMTM3-209ENST00000565003 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
CMTM3-209ENST00000565003 ATOX1O00244 68 aa4.44□□□□□ -1.7
CMTM3-209ENST00000565003 ACYP1P07311 99 aa4.43□□□□□ -1.7
CMTM3-209ENST00000565003 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
CMTM3-209ENST00000565003 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
CMTM3-209ENST00000565003 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
CMTM3-209ENST00000565003 HIST1H4AP62805 103 aaKnown RBP4.41□□□□□ -1.7
CMTM3-209ENST00000565003 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
CMTM3-209ENST00000565003 H0Y9P7 68 aa4.4□□□□□ -1.71
CMTM3-209ENST00000565003 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
CMTM3-209ENST00000565003 NEBP20929 6669 aa4.37□□□□□ -1.71
CMTM3-209ENST00000565003 MP68P56378 58 aa4.36□□□□□ -1.71
CMTM3-209ENST00000565003 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
CMTM3-209ENST00000565003 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
CMTM3-209ENST00000565003 H0YAA0 97 aa4.35□□□□□ -1.71
CMTM3-209ENST00000565003 PSPHP1O15172 72 aa4.35□□□□□ -1.71
CMTM3-209ENST00000565003 NDUFC1O43677 76 aa4.35□□□□□ -1.71
CMTM3-209ENST00000565003 A8MUN3 132 aa4.34□□□□□ -1.71
CMTM3-209ENST00000565003 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
CMTM3-209ENST00000565003 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
CMTM3-209ENST00000565003 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
CMTM3-209ENST00000565003 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
CMTM3-209ENST00000565003 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
CMTM3-209ENST00000565003 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
CMTM3-209ENST00000565003 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
CMTM3-209ENST00000565003 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
CMTM3-209ENST00000565003 KMT2DO14686 5537 aa4.23□□□□□ -1.73
CMTM3-209ENST00000565003 MT1XP80297 61 aa4.23□□□□□ -1.73
CMTM3-209ENST00000565003 Q1T7F1 81 aa4.23□□□□□ -1.73
CMTM3-209ENST00000565003 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
CMTM3-209ENST00000565003 P0C880 135 aa4.22□□□□□ -1.73
CMTM3-209ENST00000565003 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
CMTM3-209ENST00000565003 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
CMTM3-209ENST00000565003 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
CMTM3-209ENST00000565003 H3BPC8 53 aa4.19□□□□□ -1.74
CMTM3-209ENST00000565003 R4GN34 69 aa4.19□□□□□ -1.74
CMTM3-209ENST00000565003 H7BZZ5 65 aa4.18□□□□□ -1.74
CMTM3-209ENST00000565003 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
CMTM3-209ENST00000565003 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
CMTM3-209ENST00000565003 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
CMTM3-209ENST00000565003 M0QZ58 72 aa4.16□□□□□ -1.74
CMTM3-209ENST00000565003 C20orf197Q8N268 126 aa4.16□□□□□ -1.74
CMTM3-209ENST00000565003 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
CMTM3-209ENST00000565003 TRAV7A0A075B6U4 112 aa4.12□□□□□ -1.75
CMTM3-209ENST00000565003 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
CMTM3-209ENST00000565003 SPRR2EP22531 72 aa4.11□□□□□ -1.75
CMTM3-209ENST00000565003 SPRR2BP35325 72 aa4.11□□□□□ -1.75
CMTM3-209ENST00000565003 SPRR2AP35326 72 aa4.11□□□□□ -1.75
CMTM3-209ENST00000565003 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
CMTM3-209ENST00000565003 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
CMTM3-209ENST00000565003 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
CMTM3-209ENST00000565003 ACYP2P14621 99 aa4.06□□□□□ -1.76
CMTM3-209ENST00000565003 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
CMTM3-209ENST00000565003 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
CMTM3-209ENST00000565003 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
CMTM3-209ENST00000565003 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
CMTM3-209ENST00000565003 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
CMTM3-209ENST00000565003 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
CMTM3-209ENST00000565003 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
CMTM3-209ENST00000565003 SPRR2DP22532 72 aa3.97□□□□□ -1.77
CMTM3-209ENST00000565003 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
CMTM3-209ENST00000565003 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
CMTM3-209ENST00000565003 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
CMTM3-209ENST00000565003 K7ERS5 55 aa3.92□□□□□ -1.78
CMTM3-209ENST00000565003 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms