RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
KARS-204ENST00000564578 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
KARS-204ENST00000564578 CASC2Q6XLA1 102 aa6.51□□□□□ -1.37
KARS-204ENST00000564578 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
KARS-204ENST00000564578 LOC101927531A0A1B0GV80 90 aa6.49□□□□□ -1.37
KARS-204ENST00000564578 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
KARS-204ENST00000564578 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.37
KARS-204ENST00000564578 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
KARS-204ENST00000564578 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
KARS-204ENST00000564578 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
KARS-204ENST00000564578 A6NED7 52 aa6.44□□□□□ -1.38
KARS-204ENST00000564578 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
KARS-204ENST00000564578 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
KARS-204ENST00000564578 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
KARS-204ENST00000564578 Q5W150 140 aa6.42□□□□□ -1.38
KARS-204ENST00000564578 PRR15LQ9BU68 103 aa6.4□□□□□ -1.39
KARS-204ENST00000564578 SPINK7P58062 85 aa6.38□□□□□ -1.39
KARS-204ENST00000564578 HRES1P13985 223 aa6.37□□□□□ -1.39
KARS-204ENST00000564578 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
KARS-204ENST00000564578 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
KARS-204ENST00000564578 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
KARS-204ENST00000564578 IGKV2-30P06310 120 aa6.29□□□□□ -1.4
KARS-204ENST00000564578 ROMO1P60602 79 aa6.29□□□□□ -1.4
KARS-204ENST00000564578 MT1HP80294 61 aa6.29□□□□□ -1.4
KARS-204ENST00000564578 COX6B2Q6YFQ2 88 aa6.29□□□□□ -1.4
KARS-204ENST00000564578 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
KARS-204ENST00000564578 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
KARS-204ENST00000564578 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
KARS-204ENST00000564578 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
KARS-204ENST00000564578 H0Y9P7 68 aa6.19□□□□□ -1.42
KARS-204ENST00000564578 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
KARS-204ENST00000564578 M0R2T5 61 aa6.14□□□□□ -1.43
KARS-204ENST00000564578 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
KARS-204ENST00000564578 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
KARS-204ENST00000564578 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
KARS-204ENST00000564578 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
KARS-204ENST00000564578 P0C880 135 aa6.11□□□□□ -1.43
KARS-204ENST00000564578 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
KARS-204ENST00000564578 H3BPC8 53 aa6.07□□□□□ -1.44
KARS-204ENST00000564578 COA5Q86WW8 74 aa6.06□□□□□ -1.44
KARS-204ENST00000564578 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
KARS-204ENST00000564578 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
KARS-204ENST00000564578 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
KARS-204ENST00000564578 LUZP6Q538Z0 58 aa5.96□□□□□ -1.46
KARS-204ENST00000564578 S4R3F8 94 aa5.95□□□□□ -1.46
KARS-204ENST00000564578 MT2AP02795 61 aa5.94□□□□□ -1.46
KARS-204ENST00000564578 MT1FP04733 61 aa5.91□□□□□ -1.46
KARS-204ENST00000564578 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
KARS-204ENST00000564578 K7ERS5 55 aa5.89□□□□□ -1.47
KARS-204ENST00000564578 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
KARS-204ENST00000564578 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
KARS-204ENST00000564578 NDUFAF8A1L188 74 aa5.84□□□□□ -1.47
KARS-204ENST00000564578 UQCR11O14957 56 aa5.84□□□□□ -1.48
KARS-204ENST00000564578 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
KARS-204ENST00000564578 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
KARS-204ENST00000564578 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
KARS-204ENST00000564578 ACYP2P14621 99 aa5.79□□□□□ -1.48
KARS-204ENST00000564578 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
KARS-204ENST00000564578 H0YAA0 97 aa5.72□□□□□ -1.49
KARS-204ENST00000564578 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
KARS-204ENST00000564578 USH2AO75445 5202 aa5.7□□□□□ -1.5
KARS-204ENST00000564578 A0A1B0GU69 56 aa5.68□□□□□ -1.5
KARS-204ENST00000564578 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
KARS-204ENST00000564578 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
KARS-204ENST00000564578 CAMK2N1Q7Z7J9 78 aa5.62□□□□□ -1.51
KARS-204ENST00000564578 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
KARS-204ENST00000564578 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
KARS-204ENST00000564578 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
KARS-204ENST00000564578 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
KARS-204ENST00000564578 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
KARS-204ENST00000564578 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
KARS-204ENST00000564578 MT1BP07438 61 aa5.51□□□□□ -1.53
KARS-204ENST00000564578 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
KARS-204ENST00000564578 R4GN34 69 aa5.48□□□□□ -1.53
KARS-204ENST00000564578 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.53
KARS-204ENST00000564578 M0QZ58 72 aa5.45□□□□□ -1.54
KARS-204ENST00000564578 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
KARS-204ENST00000564578 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
KARS-204ENST00000564578 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
KARS-204ENST00000564578 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
KARS-204ENST00000564578 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
KARS-204ENST00000564578 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
KARS-204ENST00000564578 A0A1B0GU33 70 aa5.36□□□□□ -1.55
KARS-204ENST00000564578 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
KARS-204ENST00000564578 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
KARS-204ENST00000564578 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
KARS-204ENST00000564578 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
KARS-204ENST00000564578 MT1XP80297 61 aa5.24□□□□□ -1.57
KARS-204ENST00000564578 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
KARS-204ENST00000564578 A0A0D9SG42 100 aa5.19□□□□□ -1.58
KARS-204ENST00000564578 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
KARS-204ENST00000564578 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
KARS-204ENST00000564578 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
KARS-204ENST00000564578 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
KARS-204ENST00000564578 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
KARS-204ENST00000564578 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
KARS-204ENST00000564578 KMT2DO14686 5537 aa5.05□□□□□ -1.6
KARS-204ENST00000564578 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
KARS-204ENST00000564578 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
KARS-204ENST00000564578 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms