RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C1orf64Q8NEQ6 169 aa6.53□□□□□ -1.36
CNOT1-206ENST00000564557 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
CNOT1-206ENST00000564557 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
CNOT1-206ENST00000564557 LOC101927531A0A1B0GV80 90 aa6.48□□□□□ -1.37
CNOT1-206ENST00000564557 J3QR89 54 aa6.48□□□□□ -1.37
CNOT1-206ENST00000564557 S4R3F8 94 aa6.48□□□□□ -1.37
CNOT1-206ENST00000564557 UQCRQO14949 82 aa6.47□□□□□ -1.37
CNOT1-206ENST00000564557 CYP4F30PQ9H0H9 118 aa6.47□□□□□ -1.37
CNOT1-206ENST00000564557 ATOX1O00244 68 aa6.45□□□□□ -1.38
CNOT1-206ENST00000564557 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
CNOT1-206ENST00000564557 A0A087WVE0 104 aa6.44□□□□□ -1.38
CNOT1-206ENST00000564557 H0Y9P7 68 aa6.43□□□□□ -1.38
CNOT1-206ENST00000564557 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
CNOT1-206ENST00000564557 USH2AO75445 5202 aa6.4□□□□□ -1.38
CNOT1-206ENST00000564557 FAM236AA0A1B0GUQ0 79 aa6.4□□□□□ -1.38
CNOT1-206ENST00000564557 FAM236BA0A1B0GV22 79 aa6.4□□□□□ -1.38
CNOT1-206ENST00000564557 LCA10Q71F78 164 aa6.39□□□□□ -1.39
CNOT1-206ENST00000564557 MP68P56378 58 aa6.37□□□□□ -1.39
CNOT1-206ENST00000564557 LINC00208Q96KT6 92 aa6.35□□□□□ -1.39
CNOT1-206ENST00000564557 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
CNOT1-206ENST00000564557 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
CNOT1-206ENST00000564557 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
CNOT1-206ENST00000564557 A8MUN3 132 aa6.28□□□□□ -1.4
CNOT1-206ENST00000564557 NDUFC1O43677 76 aa6.28□□□□□ -1.4
CNOT1-206ENST00000564557 H3BPC8 53 aa6.25□□□□□ -1.41
CNOT1-206ENST00000564557 K7ERU9 68 aa6.24□□□□□ -1.41
CNOT1-206ENST00000564557 KLKP1Q107X0 134 aa6.24□□□□□ -1.41
CNOT1-206ENST00000564557 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
CNOT1-206ENST00000564557 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
CNOT1-206ENST00000564557 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-206ENST00000564557 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
CNOT1-206ENST00000564557 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
CNOT1-206ENST00000564557 Q5VV11 94 aa6.15□□□□□ -1.42
CNOT1-206ENST00000564557 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.42
CNOT1-206ENST00000564557 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
CNOT1-206ENST00000564557 H0YAA0 97 aa6.12□□□□□ -1.43
CNOT1-206ENST00000564557 TRAV7A0A075B6U4 112 aa6.1□□□□□ -1.43
CNOT1-206ENST00000564557 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
CNOT1-206ENST00000564557 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
CNOT1-206ENST00000564557 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
CNOT1-206ENST00000564557 A6NN06 94 aa6.05□□□□□ -1.44
CNOT1-206ENST00000564557 MT1BP07438 61 aa6.05□□□□□ -1.44
CNOT1-206ENST00000564557 ACYP2P14621 99 aa6.03□□□□□ -1.44
CNOT1-206ENST00000564557 C20orf197Q8N268 126 aa6.03□□□□□ -1.44
CNOT1-206ENST00000564557 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
CNOT1-206ENST00000564557 SPTSSBQ8NFR3 76 aa5.98□□□□□ -1.45
CNOT1-206ENST00000564557 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
CNOT1-206ENST00000564557 R4GN34 69 aa5.97□□□□□ -1.45
CNOT1-206ENST00000564557 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
CNOT1-206ENST00000564557 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
CNOT1-206ENST00000564557 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
CNOT1-206ENST00000564557 P0C880 135 aa5.92□□□□□ -1.46
CNOT1-206ENST00000564557 SERP2Q8N6R1 65 aa5.92□□□□□ -1.46
CNOT1-206ENST00000564557 M0QZ58 72 aa5.91□□□□□ -1.46
CNOT1-206ENST00000564557 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
CNOT1-206ENST00000564557 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
CNOT1-206ENST00000564557 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
CNOT1-206ENST00000564557 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
CNOT1-206ENST00000564557 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
CNOT1-206ENST00000564557 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
CNOT1-206ENST00000564557 COX7CP15954 63 aa5.76□□□□□ -1.49
CNOT1-206ENST00000564557 MT1XP80297 61 aa5.71□□□□□ -1.5
CNOT1-206ENST00000564557 COA5Q86WW8 74 aa5.71□□□□□ -1.5
CNOT1-206ENST00000564557 SEC61GP60059 68 aa5.67□□□□□ -1.5
CNOT1-206ENST00000564557 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
CNOT1-206ENST00000564557 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
CNOT1-206ENST00000564557 H7BZZ5 65 aa5.62□□□□□ -1.51
CNOT1-206ENST00000564557 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
CNOT1-206ENST00000564557 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
CNOT1-206ENST00000564557 KRTAP12-2P59991 146 aa5.57□□□□□ -1.52
CNOT1-206ENST00000564557 CYSTM1Q9H1C7 97 aa5.57□□□□□ -1.52
CNOT1-206ENST00000564557 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
CNOT1-206ENST00000564557 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
CNOT1-206ENST00000564557 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
CNOT1-206ENST00000564557 NEBP20929 6669 aa5.54□□□□□ -1.52
CNOT1-206ENST00000564557 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
CNOT1-206ENST00000564557 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
CNOT1-206ENST00000564557 KMT2DO14686 5537 aa5.51□□□□□ -1.53
CNOT1-206ENST00000564557 A0A1B0GU33 70 aa5.49□□□□□ -1.53
CNOT1-206ENST00000564557 A0A0D9SG42 100 aa5.48□□□□□ -1.53
CNOT1-206ENST00000564557 PCP4P48539 62 aa5.48□□□□□ -1.53
CNOT1-206ENST00000564557 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
CNOT1-206ENST00000564557 A0A1B0GU69 56 aa5.46□□□□□ -1.54
CNOT1-206ENST00000564557 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-206ENST00000564557 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
CNOT1-206ENST00000564557 SPRR2EP22531 72 aa5.43□□□□□ -1.54
CNOT1-206ENST00000564557 SPRR2BP35325 72 aa5.43□□□□□ -1.54
CNOT1-206ENST00000564557 SPRR2AP35326 72 aa5.43□□□□□ -1.54
CNOT1-206ENST00000564557 ATP5EP56381 51 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-206ENST00000564557 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
CNOT1-206ENST00000564557 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
CNOT1-206ENST00000564557 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
CNOT1-206ENST00000564557 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
CNOT1-206ENST00000564557 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
CNOT1-206ENST00000564557 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
CNOT1-206ENST00000564557 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
CNOT1-206ENST00000564557 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
CNOT1-206ENST00000564557 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
CNOT1-206ENST00000564557 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
CNOT1-206ENST00000564557 TMEM258P61165 79 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms