RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 UQCR11O14957 56 aa5.22□□□□□ -1.57
PKM-212ENST00000564440 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.57
PKM-212ENST00000564440 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
PKM-212ENST00000564440 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
PKM-212ENST00000564440 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
PKM-212ENST00000564440 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
PKM-212ENST00000564440 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
PKM-212ENST00000564440 LINC00304Q8N9R0 145 aa5.15□□□□□ -1.59
PKM-212ENST00000564440 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
PKM-212ENST00000564440 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
PKM-212ENST00000564440 KRTAP16-1A8MUX0 517 aa5.09□□□□□ -1.59
PKM-212ENST00000564440 SPINK1P00995 79 aa5.08□□□□□ -1.6
PKM-212ENST00000564440 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
PKM-212ENST00000564440 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
PKM-212ENST00000564440 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
PKM-212ENST00000564440 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
PKM-212ENST00000564440 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
PKM-212ENST00000564440 A8MUU9 505 aa4.96□□□□□ -1.62
PKM-212ENST00000564440 H0YAA0 97 aa4.96□□□□□ -1.62
PKM-212ENST00000564440 ROMO1P60602 79 aa4.95□□□□□ -1.62
PKM-212ENST00000564440 A0A1B0GU33 70 aa4.94□□□□□ -1.62
PKM-212ENST00000564440 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
PKM-212ENST00000564440 J3QL48 77 aa4.93□□□□□ -1.62
PKM-212ENST00000564440 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
PKM-212ENST00000564440 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
PKM-212ENST00000564440 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
PKM-212ENST00000564440 K7ERS5 55 aa4.86□□□□□ -1.63
PKM-212ENST00000564440 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
PKM-212ENST00000564440 XP32Q5T750 250 aa4.83□□□□□ -1.64
PKM-212ENST00000564440 P0C880 135 aa4.83□□□□□ -1.64
PKM-212ENST00000564440 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
PKM-212ENST00000564440 COX6B2Q6YFQ2 88 aa4.79□□□□□ -1.64
PKM-212ENST00000564440 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
PKM-212ENST00000564440 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
PKM-212ENST00000564440 RPL37P61927 97 aaKnown RBP4.72□□□□□ -1.65
PKM-212ENST00000564440 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
PKM-212ENST00000564440 A0A0D9SG42 100 aa4.68□□□□□ -1.66
PKM-212ENST00000564440 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
PKM-212ENST00000564440 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
PKM-212ENST00000564440 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
PKM-212ENST00000564440 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
PKM-212ENST00000564440 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
PKM-212ENST00000564440 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
PKM-212ENST00000564440 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
PKM-212ENST00000564440 S4R3F8 94 aa4.58□□□□□ -1.68
PKM-212ENST00000564440 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
PKM-212ENST00000564440 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
PKM-212ENST00000564440 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
PKM-212ENST00000564440 FSIP2Q5CZC0 6907 aa4.55□□□□□ -1.68
PKM-212ENST00000564440 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
PKM-212ENST00000564440 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
PKM-212ENST00000564440 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
PKM-212ENST00000564440 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
PKM-212ENST00000564440 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
PKM-212ENST00000564440 USH2AO75445 5202 aa4.45□□□□□ -1.7
PKM-212ENST00000564440 M0QZ58 72 aa4.43□□□□□ -1.7
PKM-212ENST00000564440 LORP23490 312 aaPredicted RBP4.4□□□□□ -1.7
PKM-212ENST00000564440 M0R2T5 61 aa4.38□□□□□ -1.71
PKM-212ENST00000564440 MT1HP80294 61 aa4.35□□□□□ -1.71
PKM-212ENST00000564440 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
PKM-212ENST00000564440 R4GN34 69 aa4.29□□□□□ -1.72
PKM-212ENST00000564440 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
PKM-212ENST00000564440 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
PKM-212ENST00000564440 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
PKM-212ENST00000564440 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
PKM-212ENST00000564440 KMT2DO14686 5537 aa4.17□□□□□ -1.74
PKM-212ENST00000564440 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
PKM-212ENST00000564440 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
PKM-212ENST00000564440 MT1FP04733 61 aa4.12□□□□□ -1.75
PKM-212ENST00000564440 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
PKM-212ENST00000564440 MT2AP02795 61 aa4.1□□□□□ -1.75
PKM-212ENST00000564440 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
PKM-212ENST00000564440 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
PKM-212ENST00000564440 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
PKM-212ENST00000564440 TNP1P09430 55 aa3.97□□□□□ -1.77
PKM-212ENST00000564440 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
PKM-212ENST00000564440 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
PKM-212ENST00000564440 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
PKM-212ENST00000564440 LCE2BO14633 110 aa3.93□□□□□ -1.78
PKM-212ENST00000564440 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
PKM-212ENST00000564440 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.78
PKM-212ENST00000564440 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
PKM-212ENST00000564440 MT1BP07438 61 aa3.84□□□□□ -1.79
PKM-212ENST00000564440 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
PKM-212ENST00000564440 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
PKM-212ENST00000564440 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
PKM-212ENST00000564440 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
PKM-212ENST00000564440 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
PKM-212ENST00000564440 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
PKM-212ENST00000564440 MT1XP80297 61 aa3.74□□□□□ -1.81
PKM-212ENST00000564440 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
PKM-212ENST00000564440 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
PKM-212ENST00000564440 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
PKM-212ENST00000564440 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
PKM-212ENST00000564440 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
PKM-212ENST00000564440 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
PKM-212ENST00000564440 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
PKM-212ENST00000564440 INE1O15225 51 aa3.63□□□□□ -1.83
PKM-212ENST00000564440 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
PKM-212ENST00000564440 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms