RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
USB1-209ENST00000564387 A8MUN3 132 aa8□□□□□ -1.13
USB1-209ENST00000564387 SMIM20Q8N5G0 67 aa7.93□□□□□ -1.14
USB1-209ENST00000564387 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
USB1-209ENST00000564387 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
USB1-209ENST00000564387 TRAV7A0A075B6U4 112 aa7.91□□□□□ -1.14
USB1-209ENST00000564387 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
USB1-209ENST00000564387 NDUFC1O43677 76 aa7.88□□□□□ -1.15
USB1-209ENST00000564387 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
USB1-209ENST00000564387 H0YAA0 97 aa7.84□□□□□ -1.15
USB1-209ENST00000564387 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
USB1-209ENST00000564387 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
USB1-209ENST00000564387 FCGBPQ9Y6R7 5405 aaPredicted RBP7.8□□□□□ -1.16
USB1-209ENST00000564387 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
USB1-209ENST00000564387 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
USB1-209ENST00000564387 MT1BP07438 61 aa7.72□□□□□ -1.17
USB1-209ENST00000564387 SERP2Q8N6R1 65 aa7.72□□□□□ -1.17
USB1-209ENST00000564387 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
USB1-209ENST00000564387 ACYP2P14621 99 aa7.67□□□□□ -1.18
USB1-209ENST00000564387 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
USB1-209ENST00000564387 SNURFQ9Y675 71 aa7.67□□□□□ -1.18
USB1-209ENST00000564387 Q5VV11 94 aa7.66□□□□□ -1.18
USB1-209ENST00000564387 C20orf197Q8N268 126 aa7.63□□□□□ -1.19
USB1-209ENST00000564387 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
USB1-209ENST00000564387 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
USB1-209ENST00000564387 P0C880 135 aa7.55□□□□□ -1.2
USB1-209ENST00000564387 COX7CP15954 63 aa7.53□□□□□ -1.2
USB1-209ENST00000564387 KRTAP9-7A8MTY7 169 aa7.51□□□□□ -1.21
USB1-209ENST00000564387 SPTSSBQ8NFR3 76 aa7.51□□□□□ -1.21
USB1-209ENST00000564387 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
USB1-209ENST00000564387 A6NN06 94 aa7.47□□□□□ -1.21
USB1-209ENST00000564387 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
USB1-209ENST00000564387 R4GN34 69 aa7.45□□□□□ -1.22
USB1-209ENST00000564387 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
USB1-209ENST00000564387 H7BZZ5 65 aa7.4□□□□□ -1.22
USB1-209ENST00000564387 M0QZ58 72 aa7.4□□□□□ -1.22
USB1-209ENST00000564387 CYSTM1Q9H1C7 97 aa7.39□□□□□ -1.23
USB1-209ENST00000564387 COA5Q86WW8 74 aa7.34□□□□□ -1.23
USB1-209ENST00000564387 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
USB1-209ENST00000564387 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
USB1-209ENST00000564387 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
USB1-209ENST00000564387 KRTAP6-3Q3LI67 103 aa7.29□□□□□ -1.24
USB1-209ENST00000564387 MT1XP80297 61 aa7.28□□□□□ -1.24
USB1-209ENST00000564387 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
USB1-209ENST00000564387 LINC01554Q52M75 96 aa7.23□□□□□ -1.25
USB1-209ENST00000564387 CCDC179H3BU77 68 aa7.2□□□□□ -1.26
USB1-209ENST00000564387 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
USB1-209ENST00000564387 SEC61GP60059 68 aa7.1□□□□□ -1.27
USB1-209ENST00000564387 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
USB1-209ENST00000564387 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
USB1-209ENST00000564387 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
USB1-209ENST00000564387 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
USB1-209ENST00000564387 A0A1B0GU33 70 aa7□□□□□ -1.29
USB1-209ENST00000564387 TMEM258P61165 79 aa6.95□□□□□ -1.3
USB1-209ENST00000564387 KMT2DO14686 5537 aa6.95□□□□□ -1.3
USB1-209ENST00000564387 A0A1B0GU69 56 aa6.94□□□□□ -1.3
USB1-209ENST00000564387 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
USB1-209ENST00000564387 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
USB1-209ENST00000564387 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
USB1-209ENST00000564387 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
USB1-209ENST00000564387 A0A0D9SG42 100 aa6.87□□□□□ -1.31
USB1-209ENST00000564387 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
USB1-209ENST00000564387 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
USB1-209ENST00000564387 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
USB1-209ENST00000564387 NEBP20929 6669 aa6.86□□□□□ -1.31
USB1-209ENST00000564387 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
USB1-209ENST00000564387 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
USB1-209ENST00000564387 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
USB1-209ENST00000564387 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
USB1-209ENST00000564387 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
USB1-209ENST00000564387 SMIM26A0A096LP01 95 aa6.79□□□□□ -1.32
USB1-209ENST00000564387 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
USB1-209ENST00000564387 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
USB1-209ENST00000564387 A8MU10 97 aa6.73□□□□□ -1.33
USB1-209ENST00000564387 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
USB1-209ENST00000564387 SPRR2EP22531 72 aa6.67□□□□□ -1.34
USB1-209ENST00000564387 SPRR2BP35325 72 aa6.67□□□□□ -1.34
USB1-209ENST00000564387 SPRR2AP35326 72 aa6.67□□□□□ -1.34
USB1-209ENST00000564387 UQCR11O14957 56 aa6.6□□□□□ -1.35
USB1-209ENST00000564387 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
USB1-209ENST00000564387 PCP4P48539 62 aa6.56□□□□□ -1.36
USB1-209ENST00000564387 Q1T7F1 81 aa6.54□□□□□ -1.36
USB1-209ENST00000564387 V9GYY9 64 aa6.54□□□□□ -1.36
USB1-209ENST00000564387 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.37
USB1-209ENST00000564387 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
USB1-209ENST00000564387 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
USB1-209ENST00000564387 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
USB1-209ENST00000564387 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
USB1-209ENST00000564387 SPRR2DP22532 72 aa6.44□□□□□ -1.38
USB1-209ENST00000564387 MT1EP04732 61 aa6.43□□□□□ -1.38
USB1-209ENST00000564387 PSPHP1O15172 72 aa6.42□□□□□ -1.38
USB1-209ENST00000564387 TNP1P09430 55 aa6.42□□□□□ -1.38
USB1-209ENST00000564387 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
USB1-209ENST00000564387 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
USB1-209ENST00000564387 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
USB1-209ENST00000564387 KRTAP19-3Q7Z4W3 81 aa6.33□□□□□ -1.4
USB1-209ENST00000564387 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
USB1-209ENST00000564387 KRTAP2-2Q9BYT5 123 aa6.32□□□□□ -1.4
USB1-209ENST00000564387 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
USB1-209ENST00000564387 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms