RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
CDH5-204ENST00000563425 MIR22HGQ0VDD5 57 aa10.03□□□□□ -0.8
CDH5-204ENST00000563425 A6NN06 94 aa10.02□□□□□ -0.81
CDH5-204ENST00000563425 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
CDH5-204ENST00000563425 A0A1B0GU33 70 aa9.86□□□□□ -0.83
CDH5-204ENST00000563425 S4R3F8 94 aa9.86□□□□□ -0.83
CDH5-204ENST00000563425 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
CDH5-204ENST00000563425 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
CDH5-204ENST00000563425 LRP2P98164 4655 aa9.84□□□□□ -0.83
CDH5-204ENST00000563425 H0YAA0 97 aa9.83□□□□□ -0.84
CDH5-204ENST00000563425 ABCA13Q86UQ4 5058 aa9.81□□□□□ -0.84
CDH5-204ENST00000563425 LPAP08519 4548 aa9.77□□□□□ -0.85
CDH5-204ENST00000563425 J3QL48 77 aa9.75□□□□□ -0.85
CDH5-204ENST00000563425 RBM12B-AS1Q9P1G2 102 aa9.74□□□□□ -0.85
CDH5-204ENST00000563425 KRTAP10-6P60371 365 aaPredicted RBP9.72□□□□□ -0.85
CDH5-204ENST00000563425 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
CDH5-204ENST00000563425 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
CDH5-204ENST00000563425 HERC2O95714 4834 aa9.63□□□□□ -0.87
CDH5-204ENST00000563425 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
CDH5-204ENST00000563425 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
CDH5-204ENST00000563425 P0C880 135 aa9.55□□□□□ -0.88
CDH5-204ENST00000563425 KRTAP13-4Q3LI77 160 aa9.54□□□□□ -0.88
CDH5-204ENST00000563425 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
CDH5-204ENST00000563425 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
CDH5-204ENST00000563425 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
CDH5-204ENST00000563425 PRAC1Q96KF2 57 aa9.48□□□□□ -0.89
CDH5-204ENST00000563425 K7ERS5 55 aa9.44□□□□□ -0.9
CDH5-204ENST00000563425 A0A0D9SG42 100 aa9.39□□□□□ -0.91
CDH5-204ENST00000563425 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
CDH5-204ENST00000563425 M0QZ58 72 aa9.3□□□□□ -0.92
CDH5-204ENST00000563425 KRTAP12-2P59991 146 aa9.19□□□□□ -0.94
CDH5-204ENST00000563425 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
CDH5-204ENST00000563425 KRTAP12-1P59990 96 aa9.18□□□□□ -0.94
CDH5-204ENST00000563425 ROMO1P60602 79 aa9.18□□□□□ -0.94
CDH5-204ENST00000563425 R4GN34 69 aa9.11□□□□□ -0.95
CDH5-204ENST00000563425 HERC1Q15751 4861 aa9.11□□□□□ -0.95
CDH5-204ENST00000563425 SPINT4Q6UDR6 99 aa9.11□□□□□ -0.95
CDH5-204ENST00000563425 KRTAP25-1Q3LHN0 102 aa9.1□□□□□ -0.95
CDH5-204ENST00000563425 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
CDH5-204ENST00000563425 LORP23490 312 aaPredicted RBP9.07□□□□□ -0.96
CDH5-204ENST00000563425 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
CDH5-204ENST00000563425 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
CDH5-204ENST00000563425 MUC2Q02817 5179 aa9.03□□□□□ -0.96
CDH5-204ENST00000563425 CRIPTQ9P021 101 aa9□□□□□ -0.97
CDH5-204ENST00000563425 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
CDH5-204ENST00000563425 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
CDH5-204ENST00000563425 MT1HP80294 61 aa8.68□□□□□ -1.02
CDH5-204ENST00000563425 RNF213Q63HN8 5207 aa8.65□□□□□ -1.02
CDH5-204ENST00000563425 M0R2T5 61 aa8.62□□□□□ -1.03
CDH5-204ENST00000563425 UBR4Q5T4S7 5183 aa8.61□□□□□ -1.03
CDH5-204ENST00000563425 FAT4Q6V0I7 4981 aa8.61□□□□□ -1.03
CDH5-204ENST00000563425 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
CDH5-204ENST00000563425 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
CDH5-204ENST00000563425 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
CDH5-204ENST00000563425 MT2AP02795 61 aa8.46□□□□□ -1.05
CDH5-204ENST00000563425 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
CDH5-204ENST00000563425 MT1FP04733 61 aa8.43□□□□□ -1.06
CDH5-204ENST00000563425 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
CDH5-204ENST00000563425 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
CDH5-204ENST00000563425 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
CDH5-204ENST00000563425 TNP1P09430 55 aa8.26□□□□□ -1.09
CDH5-204ENST00000563425 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
CDH5-204ENST00000563425 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.1
CDH5-204ENST00000563425 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.11
CDH5-204ENST00000563425 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
CDH5-204ENST00000563425 MT1BP07438 61 aa8.1□□□□□ -1.11
CDH5-204ENST00000563425 KRTAP10-5P60370 271 aa7.96□□□□□ -1.13
CDH5-204ENST00000563425 MT1XP80297 61 aa7.95□□□□□ -1.14
CDH5-204ENST00000563425 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
CDH5-204ENST00000563425 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
CDH5-204ENST00000563425 LCE2BO14633 110 aa7.82□□□□□ -1.16
CDH5-204ENST00000563425 NDUFAF8A1L188 74 aa7.8□□□□□ -1.16
CDH5-204ENST00000563425 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
CDH5-204ENST00000563425 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
CDH5-204ENST00000563425 H3BS24 57 aa7.7□□□□□ -1.18
CDH5-204ENST00000563425 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
CDH5-204ENST00000563425 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
CDH5-204ENST00000563425 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
CDH5-204ENST00000563425 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
CDH5-204ENST00000563425 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
CDH5-204ENST00000563425 USH2AO75445 5202 aa7.42□□□□□ -1.22
CDH5-204ENST00000563425 KRTAP19-5Q3LI72 72 aa7.31□□□□□ -1.24
CDH5-204ENST00000563425 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
CDH5-204ENST00000563425 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
CDH5-204ENST00000563425 SSPOA2VEC9 5147 aa7.21□□□□□ -1.26
CDH5-204ENST00000563425 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
CDH5-204ENST00000563425 KMT2DO14686 5537 aa7.14□□□□□ -1.27
CDH5-204ENST00000563425 KRTAP19-7Q3SYF9 63 aa7.09□□□□□ -1.27
CDH5-204ENST00000563425 LCE3CQ5T5A8 94 aa7.06□□□□□ -1.28
CDH5-204ENST00000563425 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CDH5-204ENST00000563425 MT1EP04732 61 aa6.92□□□□□ -1.3
CDH5-204ENST00000563425 A0A0A0MQY5 61 aa6.91□□□□□ -1.3
CDH5-204ENST00000563425 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
CDH5-204ENST00000563425 MT1LQ93083 61 aa6.86□□□□□ -1.31
CDH5-204ENST00000563425 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
CDH5-204ENST00000563425 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
CDH5-204ENST00000563425 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
CDH5-204ENST00000563425 KRTAP9-6A8MVA2 160 aa6.75□□□□□ -1.33
CDH5-204ENST00000563425 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
CDH5-204ENST00000563425 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms