RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 MT1FP04733 61 aa7.73□□□□□ -1.17
USB1-206ENST00000562534 NDUFC1O43677 76 aa7.72□□□□□ -1.17
USB1-206ENST00000562534 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
USB1-206ENST00000562534 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
USB1-206ENST00000562534 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
USB1-206ENST00000562534 COX7CP15954 63 aa7.68□□□□□ -1.18
USB1-206ENST00000562534 ACYP2P14621 99 aa7.65□□□□□ -1.18
USB1-206ENST00000562534 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
USB1-206ENST00000562534 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
USB1-206ENST00000562534 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.19
USB1-206ENST00000562534 H0YAA0 97 aa7.55□□□□□ -1.2
USB1-206ENST00000562534 LCE2BO14633 110 aa7.5□□□□□ -1.21
USB1-206ENST00000562534 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
USB1-206ENST00000562534 CHKB-CPT1BH3BT56 60 aa7.49□□□□□ -1.21
USB1-206ENST00000562534 CRCT1Q9UGL9 99 aa7.48□□□□□ -1.21
USB1-206ENST00000562534 H7BZZ5 65 aa7.46□□□□□ -1.22
USB1-206ENST00000562534 CRIPTQ9P021 101 aa7.46□□□□□ -1.22
USB1-206ENST00000562534 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
USB1-206ENST00000562534 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
USB1-206ENST00000562534 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
USB1-206ENST00000562534 CYSTM1Q9H1C7 97 aa7.42□□□□□ -1.22
USB1-206ENST00000562534 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
USB1-206ENST00000562534 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
USB1-206ENST00000562534 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
USB1-206ENST00000562534 USH2AO75445 5202 aa7.38□□□□□ -1.23
USB1-206ENST00000562534 COA5Q86WW8 74 aa7.34□□□□□ -1.23
USB1-206ENST00000562534 P0C880 135 aa7.3□□□□□ -1.24
USB1-206ENST00000562534 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.25
USB1-206ENST00000562534 Q5VV11 94 aa7.26□□□□□ -1.25
USB1-206ENST00000562534 R4GN34 69 aa7.25□□□□□ -1.25
USB1-206ENST00000562534 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
USB1-206ENST00000562534 SSPOA2VEC9 5147 aa7.21□□□□□ -1.26
USB1-206ENST00000562534 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
USB1-206ENST00000562534 MT1BP07438 61 aa7.19□□□□□ -1.26
USB1-206ENST00000562534 M0QZ58 72 aa7.18□□□□□ -1.26
USB1-206ENST00000562534 SEC61GP60059 68 aa7.17□□□□□ -1.26
USB1-206ENST00000562534 TMEM258P61165 79 aa7.17□□□□□ -1.26
USB1-206ENST00000562534 SERP1Q9Y6X1 66 aa7.14□□□□□ -1.27
USB1-206ENST00000562534 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
USB1-206ENST00000562534 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
USB1-206ENST00000562534 FCGBPQ9Y6R7 5405 aaPredicted RBP7.04□□□□□ -1.28
USB1-206ENST00000562534 A6NN06 94 aa7.02□□□□□ -1.29
USB1-206ENST00000562534 A0A1B0GU69 56 aa7□□□□□ -1.29
USB1-206ENST00000562534 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
USB1-206ENST00000562534 A0A1B0GU33 70 aa6.98□□□□□ -1.29
USB1-206ENST00000562534 PCP4P48539 62 aa6.95□□□□□ -1.3
USB1-206ENST00000562534 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
USB1-206ENST00000562534 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
USB1-206ENST00000562534 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
USB1-206ENST00000562534 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
USB1-206ENST00000562534 LINC01558Q9Y6Z2 57 aa6.91□□□□□ -1.3
USB1-206ENST00000562534 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
USB1-206ENST00000562534 MT1XP80297 61 aa6.83□□□□□ -1.32
USB1-206ENST00000562534 SMIM26A0A096LP01 95 aa6.79□□□□□ -1.32
USB1-206ENST00000562534 A0A0D9SG42 100 aa6.79□□□□□ -1.32
USB1-206ENST00000562534 V9GYY9 64 aa6.77□□□□□ -1.33
USB1-206ENST00000562534 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
USB1-206ENST00000562534 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
USB1-206ENST00000562534 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
USB1-206ENST00000562534 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
USB1-206ENST00000562534 Q1T7F1 81 aa6.71□□□□□ -1.34
USB1-206ENST00000562534 SPINT4Q6UDR6 99 aa6.71□□□□□ -1.34
USB1-206ENST00000562534 UQCR11O14957 56 aa6.7□□□□□ -1.34
USB1-206ENST00000562534 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
USB1-206ENST00000562534 A8MU10 97 aa6.66□□□□□ -1.34
USB1-206ENST00000562534 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
USB1-206ENST00000562534 KRTAP6-3Q3LI67 103 aa6.63□□□□□ -1.35
USB1-206ENST00000562534 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
USB1-206ENST00000562534 PSPHP1O15172 72 aa6.6□□□□□ -1.35
USB1-206ENST00000562534 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.36
USB1-206ENST00000562534 H3BS24 57 aa6.57□□□□□ -1.36
USB1-206ENST00000562534 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
USB1-206ENST00000562534 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
USB1-206ENST00000562534 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
USB1-206ENST00000562534 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
USB1-206ENST00000562534 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
USB1-206ENST00000562534 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
USB1-206ENST00000562534 A6NED7 52 aa6.43□□□□□ -1.38
USB1-206ENST00000562534 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
USB1-206ENST00000562534 K7ERS5 55 aa6.41□□□□□ -1.38
USB1-206ENST00000562534 KMT2DO14686 5537 aa6.39□□□□□ -1.39
USB1-206ENST00000562534 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
USB1-206ENST00000562534 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
USB1-206ENST00000562534 TNP1P09430 55 aa6.31□□□□□ -1.4
USB1-206ENST00000562534 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
USB1-206ENST00000562534 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
USB1-206ENST00000562534 SPRR2EP22531 72 aa6.16□□□□□ -1.42
USB1-206ENST00000562534 SPRR2BP35325 72 aa6.16□□□□□ -1.42
USB1-206ENST00000562534 SPRR2AP35326 72 aa6.16□□□□□ -1.42
USB1-206ENST00000562534 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
USB1-206ENST00000562534 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
USB1-206ENST00000562534 NEBP20929 6669 aa6.12□□□□□ -1.43
USB1-206ENST00000562534 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
USB1-206ENST00000562534 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
USB1-206ENST00000562534 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
USB1-206ENST00000562534 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
USB1-206ENST00000562534 MT1EP04732 61 aa6.03□□□□□ -1.44
USB1-206ENST00000562534 ROMO1P60602 79 aa6□□□□□ -1.45
USB1-206ENST00000562534 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
USB1-206ENST00000562534 SPRR2DP22532 72 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms