RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 LRP1BQ9NZR2 4599 aa4.72□□□□□ -1.65
CLUHP3-206ENST00000562354 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
CLUHP3-206ENST00000562354 DNAH8Q96JB1 4490 aa4.72□□□□□ -1.65
CLUHP3-206ENST00000562354 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
CLUHP3-206ENST00000562354 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
CLUHP3-206ENST00000562354 SACSQ9NZJ4 4579 aa4.68□□□□□ -1.66
CLUHP3-206ENST00000562354 XP32Q5T750 250 aa4.67□□□□□ -1.66
CLUHP3-206ENST00000562354 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
CLUHP3-206ENST00000562354 EPPK1P58107 5090 aaKnown RBP4.65□□□□□ -1.66
CLUHP3-206ENST00000562354 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.66
CLUHP3-206ENST00000562354 RYR2Q92736 4967 aa4.63□□□□□ -1.67
CLUHP3-206ENST00000562354 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
CLUHP3-206ENST00000562354 FAT1Q14517 4588 aa4.63□□□□□ -1.67
CLUHP3-206ENST00000562354 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
CLUHP3-206ENST00000562354 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
CLUHP3-206ENST00000562354 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
CLUHP3-206ENST00000562354 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
CLUHP3-206ENST00000562354 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
CLUHP3-206ENST00000562354 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
CLUHP3-206ENST00000562354 VPS13BQ7Z7G8 4022 aa4.58□□□□□ -1.68
CLUHP3-206ENST00000562354 PKD1P98161 4303 aa4.57□□□□□ -1.68
CLUHP3-206ENST00000562354 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
CLUHP3-206ENST00000562354 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
CLUHP3-206ENST00000562354 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
CLUHP3-206ENST00000562354 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
CLUHP3-206ENST00000562354 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
CLUHP3-206ENST00000562354 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
CLUHP3-206ENST00000562354 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
CLUHP3-206ENST00000562354 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
CLUHP3-206ENST00000562354 RYR1P21817 5038 aa4.51□□□□□ -1.69
CLUHP3-206ENST00000562354 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
CLUHP3-206ENST00000562354 TNP1P09430 55 aa4.47□□□□□ -1.69
CLUHP3-206ENST00000562354 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
CLUHP3-206ENST00000562354 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
CLUHP3-206ENST00000562354 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
CLUHP3-206ENST00000562354 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
CLUHP3-206ENST00000562354 M0R2T5 61 aa4.4□□□□□ -1.71
CLUHP3-206ENST00000562354 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
CLUHP3-206ENST00000562354 HSPG2P98160 4391 aa4.38□□□□□ -1.71
CLUHP3-206ENST00000562354 HERC2O95714 4834 aa4.36□□□□□ -1.71
CLUHP3-206ENST00000562354 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
CLUHP3-206ENST00000562354 ABCA13Q86UQ4 5058 aa4.29□□□□□ -1.72
CLUHP3-206ENST00000562354 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
CLUHP3-206ENST00000562354 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
CLUHP3-206ENST00000562354 HERC1Q15751 4861 aa4.25□□□□□ -1.73
CLUHP3-206ENST00000562354 TNXBP22105 4242 aa4.22□□□□□ -1.73
CLUHP3-206ENST00000562354 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
CLUHP3-206ENST00000562354 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
CLUHP3-206ENST00000562354 LRP2P98164 4655 aa4.11□□□□□ -1.75
CLUHP3-206ENST00000562354 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.75
CLUHP3-206ENST00000562354 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
CLUHP3-206ENST00000562354 LPAP08519 4548 aa4.04□□□□□ -1.76
CLUHP3-206ENST00000562354 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
CLUHP3-206ENST00000562354 INE1O15225 51 aa4□□□□□ -1.77
CLUHP3-206ENST00000562354 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
CLUHP3-206ENST00000562354 LORP23490 312 aaPredicted RBP3.98□□□□□ -1.77
CLUHP3-206ENST00000562354 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
CLUHP3-206ENST00000562354 MT1HP80294 61 aa3.89□□□□□ -1.79
CLUHP3-206ENST00000562354 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
CLUHP3-206ENST00000562354 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
CLUHP3-206ENST00000562354 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
CLUHP3-206ENST00000562354 LCE2CQ5TA81 110 aa3.84□□□□□ -1.79
CLUHP3-206ENST00000562354 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
CLUHP3-206ENST00000562354 MT2AP02795 61 aa3.8□□□□□ -1.8
CLUHP3-206ENST00000562354 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
CLUHP3-206ENST00000562354 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
CLUHP3-206ENST00000562354 MT1FP04733 61 aa3.76□□□□□ -1.81
CLUHP3-206ENST00000562354 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
CLUHP3-206ENST00000562354 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
CLUHP3-206ENST00000562354 MUC2Q02817 5179 aa3.74□□□□□ -1.81
CLUHP3-206ENST00000562354 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
CLUHP3-206ENST00000562354 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
CLUHP3-206ENST00000562354 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
CLUHP3-206ENST00000562354 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
CLUHP3-206ENST00000562354 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
CLUHP3-206ENST00000562354 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
CLUHP3-206ENST00000562354 LCE2BO14633 110 aa3.66□□□□□ -1.82
CLUHP3-206ENST00000562354 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
CLUHP3-206ENST00000562354 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
CLUHP3-206ENST00000562354 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
CLUHP3-206ENST00000562354 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
CLUHP3-206ENST00000562354 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
CLUHP3-206ENST00000562354 MT1BP07438 61 aa3.55□□□□□ -1.84
CLUHP3-206ENST00000562354 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
CLUHP3-206ENST00000562354 MT1XP80297 61 aa3.48□□□□□ -1.85
CLUHP3-206ENST00000562354 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
CLUHP3-206ENST00000562354 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
CLUHP3-206ENST00000562354 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
CLUHP3-206ENST00000562354 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.86
CLUHP3-206ENST00000562354 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
CLUHP3-206ENST00000562354 USH2AO75445 5202 aa3.27□□□□□ -1.89
CLUHP3-206ENST00000562354 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
CLUHP3-206ENST00000562354 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
CLUHP3-206ENST00000562354 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
CLUHP3-206ENST00000562354 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
CLUHP3-206ENST00000562354 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
CLUHP3-206ENST00000562354 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
CLUHP3-206ENST00000562354 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
CLUHP3-206ENST00000562354 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
CLUHP3-206ENST00000562354 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms