RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
IFT140-205ENST00000561954 MT1FP04733 61 aa6.64□□□□□ -1.35
IFT140-205ENST00000561954 DMAC1Q96GE9 116 aa6.6□□□□□ -1.35
IFT140-205ENST00000561954 NDUFC1O43677 76 aa6.59□□□□□ -1.35
IFT140-205ENST00000561954 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
IFT140-205ENST00000561954 SNURFQ9Y675 71 aa6.56□□□□□ -1.36
IFT140-205ENST00000561954 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
IFT140-205ENST00000561954 COX7CP15954 63 aa6.51□□□□□ -1.37
IFT140-205ENST00000561954 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
IFT140-205ENST00000561954 ACYP2P14621 99 aa6.49□□□□□ -1.37
IFT140-205ENST00000561954 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
IFT140-205ENST00000561954 H0YAA0 97 aa6.47□□□□□ -1.37
IFT140-205ENST00000561954 USH2AO75445 5202 aa6.47□□□□□ -1.37
IFT140-205ENST00000561954 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
IFT140-205ENST00000561954 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
IFT140-205ENST00000561954 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
IFT140-205ENST00000561954 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
IFT140-205ENST00000561954 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
IFT140-205ENST00000561954 CRIPTQ9P021 101 aa6.4□□□□□ -1.38
IFT140-205ENST00000561954 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
IFT140-205ENST00000561954 H7BZZ5 65 aa6.34□□□□□ -1.39
IFT140-205ENST00000561954 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
IFT140-205ENST00000561954 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
IFT140-205ENST00000561954 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
IFT140-205ENST00000561954 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
IFT140-205ENST00000561954 COA5Q86WW8 74 aa6.27□□□□□ -1.41
IFT140-205ENST00000561954 Q5VV11 94 aa6.26□□□□□ -1.41
IFT140-205ENST00000561954 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
IFT140-205ENST00000561954 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
IFT140-205ENST00000561954 H3BS24 57 aa6.22□□□□□ -1.41
IFT140-205ENST00000561954 P0C880 135 aa6.22□□□□□ -1.41
IFT140-205ENST00000561954 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
IFT140-205ENST00000561954 R4GN34 69 aa6.22□□□□□ -1.41
IFT140-205ENST00000561954 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
IFT140-205ENST00000561954 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
IFT140-205ENST00000561954 M0QZ58 72 aa6.16□□□□□ -1.42
IFT140-205ENST00000561954 MT1BP07438 61 aa6.16□□□□□ -1.42
IFT140-205ENST00000561954 TMEM258P61165 79 aa6.13□□□□□ -1.43
IFT140-205ENST00000561954 SEC61GP60059 68 aa6.12□□□□□ -1.43
IFT140-205ENST00000561954 SERP1Q9Y6X1 66 aa6.08□□□□□ -1.44
IFT140-205ENST00000561954 A6NN06 94 aa6.05□□□□□ -1.44
IFT140-205ENST00000561954 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
IFT140-205ENST00000561954 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
IFT140-205ENST00000561954 KRTAP10-5P60370 271 aa6□□□□□ -1.45
IFT140-205ENST00000561954 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
IFT140-205ENST00000561954 A0A1B0GU69 56 aa5.97□□□□□ -1.45
IFT140-205ENST00000561954 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
IFT140-205ENST00000561954 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
IFT140-205ENST00000561954 A0A1B0GU33 70 aa5.92□□□□□ -1.46
IFT140-205ENST00000561954 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
IFT140-205ENST00000561954 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
IFT140-205ENST00000561954 MT1XP80297 61 aa5.86□□□□□ -1.47
IFT140-205ENST00000561954 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
IFT140-205ENST00000561954 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
IFT140-205ENST00000561954 PCP4P48539 62 aa5.83□□□□□ -1.48
IFT140-205ENST00000561954 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
IFT140-205ENST00000561954 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
IFT140-205ENST00000561954 SMIM26A0A096LP01 95 aa5.8□□□□□ -1.48
IFT140-205ENST00000561954 A0A0D9SG42 100 aa5.8□□□□□ -1.48
IFT140-205ENST00000561954 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
IFT140-205ENST00000561954 V9GYY9 64 aa5.76□□□□□ -1.49
IFT140-205ENST00000561954 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
IFT140-205ENST00000561954 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
IFT140-205ENST00000561954 UQCR11O14957 56 aa5.7□□□□□ -1.5
IFT140-205ENST00000561954 KRTAP6-3Q3LI67 103 aa5.7□□□□□ -1.5
IFT140-205ENST00000561954 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
IFT140-205ENST00000561954 Q1T7F1 81 aa5.68□□□□□ -1.5
IFT140-205ENST00000561954 A8MU10 97 aa5.66□□□□□ -1.5
IFT140-205ENST00000561954 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
IFT140-205ENST00000561954 PSPHP1O15172 72 aa5.6□□□□□ -1.51
IFT140-205ENST00000561954 KMT2DO14686 5537 aa5.6□□□□□ -1.51
IFT140-205ENST00000561954 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
IFT140-205ENST00000561954 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
IFT140-205ENST00000561954 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
IFT140-205ENST00000561954 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
IFT140-205ENST00000561954 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
IFT140-205ENST00000561954 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
IFT140-205ENST00000561954 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
IFT140-205ENST00000561954 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
IFT140-205ENST00000561954 K7ERS5 55 aa5.49□□□□□ -1.53
IFT140-205ENST00000561954 A6NED7 52 aa5.48□□□□□ -1.53
IFT140-205ENST00000561954 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
IFT140-205ENST00000561954 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
IFT140-205ENST00000561954 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
IFT140-205ENST00000561954 NEBP20929 6669 aa5.45□□□□□ -1.54
IFT140-205ENST00000561954 TNP1P09430 55 aa5.39□□□□□ -1.55
IFT140-205ENST00000561954 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
IFT140-205ENST00000561954 SPRR2EP22531 72 aa5.32□□□□□ -1.56
IFT140-205ENST00000561954 SPRR2BP35325 72 aa5.32□□□□□ -1.56
IFT140-205ENST00000561954 SPRR2AP35326 72 aa5.32□□□□□ -1.56
IFT140-205ENST00000561954 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
IFT140-205ENST00000561954 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
IFT140-205ENST00000561954 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
IFT140-205ENST00000561954 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
IFT140-205ENST00000561954 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
IFT140-205ENST00000561954 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
IFT140-205ENST00000561954 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
IFT140-205ENST00000561954 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
IFT140-205ENST00000561954 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
IFT140-205ENST00000561954 MT1EP04732 61 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms