RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 XP32Q5T750 250 aa10.46□□□□□ -0.74
RPUSD1-202ENST00000561734 CSAG1Q6PB30 78 aa10.46□□□□□ -0.74
RPUSD1-202ENST00000561734 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
RPUSD1-202ENST00000561734 KRTAP17-1Q9BYP8 105 aa10.4□□□□□ -0.74
RPUSD1-202ENST00000561734 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
RPUSD1-202ENST00000561734 RYR1P21817 5038 aa10.38□□□□□ -0.75
RPUSD1-202ENST00000561734 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
RPUSD1-202ENST00000561734 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
RPUSD1-202ENST00000561734 KRTAP10-6P60371 365 aaPredicted RBP10.32□□□□□ -0.76
RPUSD1-202ENST00000561734 EPPK1P58107 5090 aaKnown RBP10.3□□□□□ -0.76
RPUSD1-202ENST00000561734 S4R3F8 94 aa10.3□□□□□ -0.76
RPUSD1-202ENST00000561734 MT1HL1P0DM35 61 aa10.28□□□□□ -0.76
RPUSD1-202ENST00000561734 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
RPUSD1-202ENST00000561734 K7ERS5 55 aa10.24□□□□□ -0.77
RPUSD1-202ENST00000561734 KRTAP13-4Q3LI77 160 aa10.24□□□□□ -0.77
RPUSD1-202ENST00000561734 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
RPUSD1-202ENST00000561734 KRTAP25-1Q3LHN0 102 aa10.18□□□□□ -0.78
RPUSD1-202ENST00000561734 LPAP08519 4548 aa10.14□□□□□ -0.79
RPUSD1-202ENST00000561734 A0A0D9SG42 100 aa10.14□□□□□ -0.79
RPUSD1-202ENST00000561734 P0C880 135 aa10.13□□□□□ -0.79
RPUSD1-202ENST00000561734 CRIPTQ9P021 101 aa10.07□□□□□ -0.8
RPUSD1-202ENST00000561734 ROMO1P60602 79 aa10.04□□□□□ -0.8
RPUSD1-202ENST00000561734 TPRXLQ17RH7 258 aa10.04□□□□□ -0.8
RPUSD1-202ENST00000561734 LRP2P98164 4655 aa10.04□□□□□ -0.8
RPUSD1-202ENST00000561734 BIRC6Q9NR09 4857 aa9.98□□□□□ -0.81
RPUSD1-202ENST00000561734 H3BS24 57 aa9.91□□□□□ -0.82
RPUSD1-202ENST00000561734 KRTAP12-2P59991 146 aa9.9□□□□□ -0.83
RPUSD1-202ENST00000561734 ABCA13Q86UQ4 5058 aa9.89□□□□□ -0.83
RPUSD1-202ENST00000561734 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
RPUSD1-202ENST00000561734 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
RPUSD1-202ENST00000561734 SPINT4Q6UDR6 99 aa9.78□□□□□ -0.84
RPUSD1-202ENST00000561734 HERC2O95714 4834 aa9.78□□□□□ -0.84
RPUSD1-202ENST00000561734 M0QZ58 72 aa9.76□□□□□ -0.85
RPUSD1-202ENST00000561734 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
RPUSD1-202ENST00000561734 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
RPUSD1-202ENST00000561734 MUC17Q685J3 4493 aa9.64□□□□□ -0.87
RPUSD1-202ENST00000561734 KRTAP4-1Q9BYQ7 146 aa9.58□□□□□ -0.88
RPUSD1-202ENST00000561734 R4GN34 69 aa9.55□□□□□ -0.88
RPUSD1-202ENST00000561734 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
RPUSD1-202ENST00000561734 J3QL48 77 aa9.5□□□□□ -0.89
RPUSD1-202ENST00000561734 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
RPUSD1-202ENST00000561734 KRTAP19-2Q3LHN2 52 aa9.41□□□□□ -0.9
RPUSD1-202ENST00000561734 KRTAP15-1Q3LI76 137 aa9.28□□□□□ -0.92
RPUSD1-202ENST00000561734 MUC2Q02817 5179 aa9.21□□□□□ -0.93
RPUSD1-202ENST00000561734 HERC1Q15751 4861 aa9.19□□□□□ -0.94
RPUSD1-202ENST00000561734 FLGP20930 4061 aaPredicted RBP9.11□□□□□ -0.95
RPUSD1-202ENST00000561734 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
RPUSD1-202ENST00000561734 NDUFAF8A1L188 74 aa9.03□□□□□ -0.96
RPUSD1-202ENST00000561734 HMCN2Q8NDA2 5059 aa8.97□□□□□ -0.97
RPUSD1-202ENST00000561734 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
RPUSD1-202ENST00000561734 PP632Q6XCG6 107 aa8.87□□□□□ -0.99
RPUSD1-202ENST00000561734 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
RPUSD1-202ENST00000561734 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
RPUSD1-202ENST00000561734 TNP1P09430 55 aa8.72□□□□□ -1.01
RPUSD1-202ENST00000561734 SPRR2GQ9BYE4 73 aa8.66□□□□□ -1.02
RPUSD1-202ENST00000561734 UBR4Q5T4S7 5183 aa8.66□□□□□ -1.02
RPUSD1-202ENST00000561734 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
RPUSD1-202ENST00000561734 M0R2T5 61 aa8.62□□□□□ -1.03
RPUSD1-202ENST00000561734 MT1HP80294 61 aa8.6□□□□□ -1.03
RPUSD1-202ENST00000561734 KRTAP23-1A1A580 65 aa8.58□□□□□ -1.04
RPUSD1-202ENST00000561734 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
RPUSD1-202ENST00000561734 MT1FP04733 61 aa8.48□□□□□ -1.05
RPUSD1-202ENST00000561734 MT2AP02795 61 aa8.46□□□□□ -1.05
RPUSD1-202ENST00000561734 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
RPUSD1-202ENST00000561734 LUZP6Q538Z0 58 aa8.45□□□□□ -1.06
RPUSD1-202ENST00000561734 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
RPUSD1-202ENST00000561734 SPRR5A0A1B0GTR4 108 aa8.29□□□□□ -1.08
RPUSD1-202ENST00000561734 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
RPUSD1-202ENST00000561734 KRTAP19-8Q3LI54 63 aa8.27□□□□□ -1.09
RPUSD1-202ENST00000561734 MT1BP07438 61 aa8.19□□□□□ -1.1
RPUSD1-202ENST00000561734 KRTAP10-5P60370 271 aa8.15□□□□□ -1.11
RPUSD1-202ENST00000561734 MT1XP80297 61 aa8.14□□□□□ -1.11
RPUSD1-202ENST00000561734 A0A0A0MQY5 61 aa8.09□□□□□ -1.11
RPUSD1-202ENST00000561734 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
RPUSD1-202ENST00000561734 KRTAP9-3Q9BYQ3 159 aa8.04□□□□□ -1.12
RPUSD1-202ENST00000561734 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
RPUSD1-202ENST00000561734 KRTAP10-7P60409 375 aaPredicted RBP7.91□□□□□ -1.14
RPUSD1-202ENST00000561734 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
RPUSD1-202ENST00000561734 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
RPUSD1-202ENST00000561734 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
RPUSD1-202ENST00000561734 LCE2BO14633 110 aa7.74□□□□□ -1.17
RPUSD1-202ENST00000561734 USH2AO75445 5202 aa7.59□□□□□ -1.2
RPUSD1-202ENST00000561734 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
RPUSD1-202ENST00000561734 KMT2DO14686 5537 aa7.48□□□□□ -1.21
RPUSD1-202ENST00000561734 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
RPUSD1-202ENST00000561734 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
RPUSD1-202ENST00000561734 LCE3CQ5T5A8 94 aa7.42□□□□□ -1.22
RPUSD1-202ENST00000561734 INE1O15225 51 aa7.33□□□□□ -1.24
RPUSD1-202ENST00000561734 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
RPUSD1-202ENST00000561734 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
RPUSD1-202ENST00000561734 KRTAP9-6A8MVA2 160 aa7.18□□□□□ -1.26
RPUSD1-202ENST00000561734 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
RPUSD1-202ENST00000561734 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
RPUSD1-202ENST00000561734 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
RPUSD1-202ENST00000561734 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
RPUSD1-202ENST00000561734 MT1EP04732 61 aa7.03□□□□□ -1.28
RPUSD1-202ENST00000561734 MT1LQ93083 61 aa7.03□□□□□ -1.28
RPUSD1-202ENST00000561734 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
RPUSD1-202ENST00000561734 KRTAP19-6Q3LI70 58 aa6.92□□□□□ -1.3
RPUSD1-202ENST00000561734 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms