RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 A6NN06 94 aa7.71□□□□□ -1.18
SPG7-203ENST00000561702 UQCR11O14957 56 aa7.7□□□□□ -1.18
SPG7-203ENST00000561702 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
SPG7-203ENST00000561702 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
SPG7-203ENST00000561702 SEC61GP60059 68 aa7.68□□□□□ -1.18
SPG7-203ENST00000561702 J3QL48 77 aa7.64□□□□□ -1.19
SPG7-203ENST00000561702 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
SPG7-203ENST00000561702 XP32Q5T750 250 aa7.57□□□□□ -1.2
SPG7-203ENST00000561702 COX6B2Q6YFQ2 88 aa7.56□□□□□ -1.2
SPG7-203ENST00000561702 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
SPG7-203ENST00000561702 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
SPG7-203ENST00000561702 RPL37P61927 97 aaKnown RBP7.53□□□□□ -1.2
SPG7-203ENST00000561702 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
SPG7-203ENST00000561702 LPAP08519 4548 aa7.44□□□□□ -1.22
SPG7-203ENST00000561702 A0A1B0GU33 70 aa7.42□□□□□ -1.22
SPG7-203ENST00000561702 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
SPG7-203ENST00000561702 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
SPG7-203ENST00000561702 LRP2P98164 4655 aa7.38□□□□□ -1.23
SPG7-203ENST00000561702 H0YAA0 97 aa7.37□□□□□ -1.23
SPG7-203ENST00000561702 S4R3F8 94 aa7.28□□□□□ -1.24
SPG7-203ENST00000561702 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
SPG7-203ENST00000561702 HERC1Q15751 4861 aa7.25□□□□□ -1.25
SPG7-203ENST00000561702 K7ERS5 55 aa7.25□□□□□ -1.25
SPG7-203ENST00000561702 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
SPG7-203ENST00000561702 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
SPG7-203ENST00000561702 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
SPG7-203ENST00000561702 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
SPG7-203ENST00000561702 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
SPG7-203ENST00000561702 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
SPG7-203ENST00000561702 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
SPG7-203ENST00000561702 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
SPG7-203ENST00000561702 LCE2BO14633 110 aa7.03□□□□□ -1.28
SPG7-203ENST00000561702 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
SPG7-203ENST00000561702 P0C880 135 aa7.03□□□□□ -1.28
SPG7-203ENST00000561702 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
SPG7-203ENST00000561702 ROMO1P60602 79 aa6.99□□□□□ -1.29
SPG7-203ENST00000561702 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
SPG7-203ENST00000561702 A0A0D9SG42 100 aa6.98□□□□□ -1.29
SPG7-203ENST00000561702 M0QZ58 72 aa6.97□□□□□ -1.29
SPG7-203ENST00000561702 MUC2Q02817 5179 aa6.89□□□□□ -1.31
SPG7-203ENST00000561702 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
SPG7-203ENST00000561702 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
SPG7-203ENST00000561702 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
SPG7-203ENST00000561702 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
SPG7-203ENST00000561702 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
SPG7-203ENST00000561702 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
SPG7-203ENST00000561702 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
SPG7-203ENST00000561702 R4GN34 69 aa6.76□□□□□ -1.33
SPG7-203ENST00000561702 CRIPTQ9P021 101 aa6.75□□□□□ -1.33
SPG7-203ENST00000561702 MT1HP80294 61 aa6.66□□□□□ -1.34
SPG7-203ENST00000561702 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
SPG7-203ENST00000561702 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
SPG7-203ENST00000561702 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
SPG7-203ENST00000561702 M0R2T5 61 aa6.56□□□□□ -1.36
SPG7-203ENST00000561702 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
SPG7-203ENST00000561702 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
SPG7-203ENST00000561702 MT2AP02795 61 aa6.4□□□□□ -1.38
SPG7-203ENST00000561702 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
SPG7-203ENST00000561702 MT1FP04733 61 aa6.38□□□□□ -1.39
SPG7-203ENST00000561702 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
SPG7-203ENST00000561702 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
SPG7-203ENST00000561702 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SPG7-203ENST00000561702 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
SPG7-203ENST00000561702 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
SPG7-203ENST00000561702 H3BS24 57 aa6.26□□□□□ -1.41
SPG7-203ENST00000561702 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
SPG7-203ENST00000561702 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
SPG7-203ENST00000561702 TNP1P09430 55 aa6.18□□□□□ -1.42
SPG7-203ENST00000561702 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
SPG7-203ENST00000561702 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
SPG7-203ENST00000561702 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
SPG7-203ENST00000561702 MT1BP07438 61 aa6.04□□□□□ -1.44
SPG7-203ENST00000561702 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
SPG7-203ENST00000561702 MT1XP80297 61 aa5.85□□□□□ -1.47
SPG7-203ENST00000561702 KRTAP10-5P60370 271 aa5.84□□□□□ -1.48
SPG7-203ENST00000561702 USH2AO75445 5202 aa5.82□□□□□ -1.48
SPG7-203ENST00000561702 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
SPG7-203ENST00000561702 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
SPG7-203ENST00000561702 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
SPG7-203ENST00000561702 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
SPG7-203ENST00000561702 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
SPG7-203ENST00000561702 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
SPG7-203ENST00000561702 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
SPG7-203ENST00000561702 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
SPG7-203ENST00000561702 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SPG7-203ENST00000561702 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
SPG7-203ENST00000561702 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
SPG7-203ENST00000561702 FSIP2Q5CZC0 6907 aa5.52□□□□□ -1.53
SPG7-203ENST00000561702 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
SPG7-203ENST00000561702 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
SPG7-203ENST00000561702 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
SPG7-203ENST00000561702 KMT2DO14686 5537 aa5.35□□□□□ -1.55
SPG7-203ENST00000561702 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
SPG7-203ENST00000561702 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
SPG7-203ENST00000561702 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
SPG7-203ENST00000561702 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
SPG7-203ENST00000561702 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
SPG7-203ENST00000561702 MT1EP04732 61 aa5.12□□□□□ -1.59
SPG7-203ENST00000561702 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
SPG7-203ENST00000561702 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms