RNA–Protein interactions for RNA: ENST00000561540.1

KCTD13-202, Transcript of potassium channel tetramerization domain containing 13, humanhuman

TSL 1 (best) BASIC

Gene KCTD13, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD13-202ENST00000561540 PSPHP1O15172 72 aa11.02□□□□□ -0.65
KCTD13-202ENST00000561540 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.65
KCTD13-202ENST00000561540 KRTAP3-1Q9BYR8 98 aa10.99□□□□□ -0.65
KCTD13-202ENST00000561540 LCE2BO14633 110 aa10.98□□□□□ -0.65
KCTD13-202ENST00000561540 COX6B2Q6YFQ2 88 aa10.98□□□□□ -0.65
KCTD13-202ENST00000561540 PRR15LQ9BU68 103 aa10.96□□□□□ -0.65
KCTD13-202ENST00000561540 Q5VV11 94 aa10.94□□□□□ -0.66
KCTD13-202ENST00000561540 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
KCTD13-202ENST00000561540 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
KCTD13-202ENST00000561540 KRTAP19-2Q3LHN2 52 aa10.82□□□□□ -0.68
KCTD13-202ENST00000561540 BRK1Q8WUW1 75 aa10.77□□□□□ -0.69
KCTD13-202ENST00000561540 A0A1B0GU69 56 aa10.76□□□□□ -0.69
KCTD13-202ENST00000561540 A6NED7 52 aa10.68□□□□□ -0.7
KCTD13-202ENST00000561540 H1FX-AS1Q4G0G2 97 aa10.67□□□□□ -0.7
KCTD13-202ENST00000561540 PRO0628Q9UI54 55 aa10.67□□□□□ -0.7
KCTD13-202ENST00000561540 LCE2CQ5TA81 110 aa10.67□□□□□ -0.7
KCTD13-202ENST00000561540 FLGP20930 4061 aaPredicted RBP10.66□□□□□ -0.7
KCTD13-202ENST00000561540 FAT4Q6V0I7 4981 aa10.64□□□□□ -0.71
KCTD13-202ENST00000561540 SEC61GP60059 68 aa10.61□□□□□ -0.71
KCTD13-202ENST00000561540 LCA10Q71F78 164 aa10.61□□□□□ -0.71
KCTD13-202ENST00000561540 S4R3F8 94 aa10.61□□□□□ -0.71
KCTD13-202ENST00000561540 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
KCTD13-202ENST00000561540 A8MU10 97 aa10.52□□□□□ -0.73
KCTD13-202ENST00000561540 UQCR11O14957 56 aa10.49□□□□□ -0.73
KCTD13-202ENST00000561540 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
KCTD13-202ENST00000561540 MT1HP80294 61 aa10.45□□□□□ -0.74
KCTD13-202ENST00000561540 SPATA8Q6RVD6 105 aa10.41□□□□□ -0.74
KCTD13-202ENST00000561540 MIR22HGQ0VDD5 57 aa10.39□□□□□ -0.75
KCTD13-202ENST00000561540 A0A1B0GU33 70 aa10.34□□□□□ -0.75
KCTD13-202ENST00000561540 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
KCTD13-202ENST00000561540 KRTAP10-6P60371 365 aaPredicted RBP10.29□□□□□ -0.76
KCTD13-202ENST00000561540 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
KCTD13-202ENST00000561540 M0R2T5 61 aa10.27□□□□□ -0.77
KCTD13-202ENST00000561540 H0YAA0 97 aa10.24□□□□□ -0.77
KCTD13-202ENST00000561540 PMAIP1Q13794 54 aa10.19□□□□□ -0.78
KCTD13-202ENST00000561540 ADM2Q7Z4H4 148 aa10.18□□□□□ -0.78
KCTD13-202ENST00000561540 P0C880 135 aa10.16□□□□□ -0.78
KCTD13-202ENST00000561540 LORP23490 312 aaPredicted RBP10.15□□□□□ -0.78
KCTD13-202ENST00000561540 A6NN06 94 aa10.1□□□□□ -0.79
KCTD13-202ENST00000561540 KRTAP13-4Q3LI77 160 aa10.05□□□□□ -0.8
KCTD13-202ENST00000561540 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
KCTD13-202ENST00000561540 MT2AP02795 61 aa9.97□□□□□ -0.81
KCTD13-202ENST00000561540 M0QZ58 72 aa9.93□□□□□ -0.82
KCTD13-202ENST00000561540 MT1FP04733 61 aa9.91□□□□□ -0.82
KCTD13-202ENST00000561540 A0A0D9SG42 100 aa9.88□□□□□ -0.83
KCTD13-202ENST00000561540 K7ERS5 55 aa9.86□□□□□ -0.83
KCTD13-202ENST00000561540 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
KCTD13-202ENST00000561540 KRTAP10-10P60014 251 aa9.85□□□□□ -0.83
KCTD13-202ENST00000561540 R4GN34 69 aa9.79□□□□□ -0.84
KCTD13-202ENST00000561540 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
KCTD13-202ENST00000561540 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
KCTD13-202ENST00000561540 KRTAP12-1P59990 96 aa9.68□□□□□ -0.86
KCTD13-202ENST00000561540 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
KCTD13-202ENST00000561540 KRTAP19-1Q8IUB9 90 aa9.64□□□□□ -0.87
KCTD13-202ENST00000561540 SPRR2GQ9BYE4 73 aa9.64□□□□□ -0.87
KCTD13-202ENST00000561540 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
KCTD13-202ENST00000561540 LINC01554Q52M75 96 aa9.62□□□□□ -0.87
KCTD13-202ENST00000561540 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
KCTD13-202ENST00000561540 ROMO1P60602 79 aa9.5□□□□□ -0.89
KCTD13-202ENST00000561540 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
KCTD13-202ENST00000561540 H3BS24 57 aa9.39□□□□□ -0.91
KCTD13-202ENST00000561540 MT1BP07438 61 aa9.33□□□□□ -0.92
KCTD13-202ENST00000561540 USH2AO75445 5202 aa9.32□□□□□ -0.92
KCTD13-202ENST00000561540 KRTAP25-1Q3LHN0 102 aa9.24□□□□□ -0.93
KCTD13-202ENST00000561540 PLAC4Q8WY50 150 aa9.2□□□□□ -0.94
KCTD13-202ENST00000561540 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
KCTD13-202ENST00000561540 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
KCTD13-202ENST00000561540 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
KCTD13-202ENST00000561540 SSPOA2VEC9 5147 aa9.08□□□□□ -0.96
KCTD13-202ENST00000561540 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
KCTD13-202ENST00000561540 MT1XP80297 61 aa8.96□□□□□ -0.97
KCTD13-202ENST00000561540 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.98
KCTD13-202ENST00000561540 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
KCTD13-202ENST00000561540 PRO2289Q9P1D8 64 aa8.85□□□□□ -0.99
KCTD13-202ENST00000561540 CRCT1Q9UGL9 99 aa8.82□□□□□ -1
KCTD13-202ENST00000561540 TNP1P09430 55 aa8.81□□□□□ -1
KCTD13-202ENST00000561540 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
KCTD13-202ENST00000561540 PP632Q6XCG6 107 aa8.71□□□□□ -1.01
KCTD13-202ENST00000561540 KRTAP23-1A1A580 65 aa8.64□□□□□ -1.03
KCTD13-202ENST00000561540 KRTAP10-7P60409 375 aaPredicted RBP8.58□□□□□ -1.04
KCTD13-202ENST00000561540 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
KCTD13-202ENST00000561540 KRTAP10-12P60413 245 aa8.5□□□□□ -1.05
KCTD13-202ENST00000561540 LCE3AQ5TA76 89 aa8.39□□□□□ -1.07
KCTD13-202ENST00000561540 KMT2DO14686 5537 aa8.37□□□□□ -1.07
KCTD13-202ENST00000561540 KRTAP4-8A0A0G2JLE6 195 aa8.32□□□□□ -1.08
KCTD13-202ENST00000561540 KRTAP4-8Q9BYQ9 185 aa8.32□□□□□ -1.08
KCTD13-202ENST00000561540 MACF1Q9UPN3 7388 aaKnown RBP8.28□□□□□ -1.08
KCTD13-202ENST00000561540 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
KCTD13-202ENST00000561540 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
KCTD13-202ENST00000561540 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
KCTD13-202ENST00000561540 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
KCTD13-202ENST00000561540 KRTAP4-6Q9BYQ5 205 aa8.15□□□□□ -1.1
KCTD13-202ENST00000561540 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
KCTD13-202ENST00000561540 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
KCTD13-202ENST00000561540 KRTAP19-5Q3LI72 72 aa8.01□□□□□ -1.13
KCTD13-202ENST00000561540 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
KCTD13-202ENST00000561540 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
KCTD13-202ENST00000561540 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
KCTD13-202ENST00000561540 SPRR2FQ96RM1 72 aa7.9□□□□□ -1.14
KCTD13-202ENST00000561540 MT1EP04732 61 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms