RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TRAV22A0A0B4J277 110 aa4.99□□□□□ -1.61
TPM1-225ENST00000560679 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
TPM1-225ENST00000560679 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
TPM1-225ENST00000560679 NOTCH2NLQ7Z3S9 236 aa4.98□□□□□ -1.61
TPM1-225ENST00000560679 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
TPM1-225ENST00000560679 NDUFS5O43920 106 aa4.96□□□□□ -1.62
TPM1-225ENST00000560679 C1orf64Q8NEQ6 169 aa4.96□□□□□ -1.62
TPM1-225ENST00000560679 LINC00313P59037 77 aa4.93□□□□□ -1.62
TPM1-225ENST00000560679 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
TPM1-225ENST00000560679 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
TPM1-225ENST00000560679 SMIM26A0A096LP01 95 aa4.9□□□□□ -1.63
TPM1-225ENST00000560679 C20orf166-AS1Q96NR2 134 aa4.9□□□□□ -1.63
TPM1-225ENST00000560679 LOC101927531A0A1B0GV80 90 aa4.89□□□□□ -1.63
TPM1-225ENST00000560679 A8MUU9 505 aa4.89□□□□□ -1.63
TPM1-225ENST00000560679 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
TPM1-225ENST00000560679 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
TPM1-225ENST00000560679 MPLKIPQ8TAP9 179 aa4.88□□□□□ -1.63
TPM1-225ENST00000560679 Q5W150 140 aa4.87□□□□□ -1.63
TPM1-225ENST00000560679 HRES1P13985 223 aa4.84□□□□□ -1.63
TPM1-225ENST00000560679 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
TPM1-225ENST00000560679 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
TPM1-225ENST00000560679 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
TPM1-225ENST00000560679 C4orf26Q17RF5 130 aa4.79□□□□□ -1.64
TPM1-225ENST00000560679 COA5Q86WW8 74 aa4.79□□□□□ -1.64
TPM1-225ENST00000560679 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
TPM1-225ENST00000560679 Q1T7F1 81 aa4.75□□□□□ -1.65
TPM1-225ENST00000560679 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
TPM1-225ENST00000560679 DMAC1Q96GE9 116 aa4.73□□□□□ -1.65
TPM1-225ENST00000560679 V9GYY9 64 aa4.73□□□□□ -1.65
TPM1-225ENST00000560679 KMT2DO14686 5537 aa4.73□□□□□ -1.65
TPM1-225ENST00000560679 C7orf65Q6ZTY9 151 aa4.72□□□□□ -1.65
TPM1-225ENST00000560679 ACYP2P14621 99 aa4.7□□□□□ -1.66
TPM1-225ENST00000560679 A8MUN3 132 aa4.65□□□□□ -1.67
TPM1-225ENST00000560679 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
TPM1-225ENST00000560679 PSPHP1O15172 72 aa4.65□□□□□ -1.67
TPM1-225ENST00000560679 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
TPM1-225ENST00000560679 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
TPM1-225ENST00000560679 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
TPM1-225ENST00000560679 Q5VV11 94 aa4.62□□□□□ -1.67
TPM1-225ENST00000560679 A6NN06 94 aa4.61□□□□□ -1.67
TPM1-225ENST00000560679 SPINK7P58062 85 aa4.6□□□□□ -1.67
TPM1-225ENST00000560679 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
TPM1-225ENST00000560679 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
TPM1-225ENST00000560679 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
TPM1-225ENST00000560679 MT1BP07438 61 aa4.57□□□□□ -1.68
TPM1-225ENST00000560679 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
TPM1-225ENST00000560679 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
TPM1-225ENST00000560679 SPTSSBQ8NFR3 76 aa4.53□□□□□ -1.68
TPM1-225ENST00000560679 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
TPM1-225ENST00000560679 A6NED7 52 aa4.52□□□□□ -1.69
TPM1-225ENST00000560679 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
TPM1-225ENST00000560679 A0A1B0GU69 56 aa4.5□□□□□ -1.69
TPM1-225ENST00000560679 KRTAP3-3Q9BYR6 98 aa4.5□□□□□ -1.69
TPM1-225ENST00000560679 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
TPM1-225ENST00000560679 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
TPM1-225ENST00000560679 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
TPM1-225ENST00000560679 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
TPM1-225ENST00000560679 LCA10Q71F78 164 aa4.45□□□□□ -1.7
TPM1-225ENST00000560679 A8MU10 97 aa4.44□□□□□ -1.7
TPM1-225ENST00000560679 SEC61GP60059 68 aa4.43□□□□□ -1.7
TPM1-225ENST00000560679 SPRR2EP22531 72 aa4.42□□□□□ -1.7
TPM1-225ENST00000560679 SPRR2BP35325 72 aa4.42□□□□□ -1.7
TPM1-225ENST00000560679 SPRR2AP35326 72 aa4.42□□□□□ -1.7
TPM1-225ENST00000560679 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
TPM1-225ENST00000560679 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
TPM1-225ENST00000560679 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
TPM1-225ENST00000560679 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
TPM1-225ENST00000560679 UQCR11O14957 56 aa4.39□□□□□ -1.71
TPM1-225ENST00000560679 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
TPM1-225ENST00000560679 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
TPM1-225ENST00000560679 S4R3F8 94 aa4.39□□□□□ -1.71
TPM1-225ENST00000560679 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
TPM1-225ENST00000560679 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
TPM1-225ENST00000560679 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
TPM1-225ENST00000560679 A0A1B0GU33 70 aa4.31□□□□□ -1.72
TPM1-225ENST00000560679 H0YAA0 97 aa4.28□□□□□ -1.72
TPM1-225ENST00000560679 SPRR2DP22532 72 aa4.27□□□□□ -1.73
TPM1-225ENST00000560679 CSAG1Q6PB30 78 aa4.25□□□□□ -1.73
TPM1-225ENST00000560679 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
TPM1-225ENST00000560679 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
TPM1-225ENST00000560679 P0C880 135 aa4.2□□□□□ -1.74
TPM1-225ENST00000560679 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
TPM1-225ENST00000560679 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
TPM1-225ENST00000560679 MT1XP80297 61 aa4.18□□□□□ -1.74
TPM1-225ENST00000560679 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
TPM1-225ENST00000560679 K7ERS5 55 aa4.15□□□□□ -1.75
TPM1-225ENST00000560679 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
TPM1-225ENST00000560679 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
TPM1-225ENST00000560679 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
TPM1-225ENST00000560679 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
TPM1-225ENST00000560679 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
TPM1-225ENST00000560679 A0A0D9SG42 100 aa4.11□□□□□ -1.75
TPM1-225ENST00000560679 M0QZ58 72 aa4.11□□□□□ -1.75
TPM1-225ENST00000560679 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
TPM1-225ENST00000560679 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
TPM1-225ENST00000560679 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
TPM1-225ENST00000560679 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
TPM1-225ENST00000560679 R4GN34 69 aa4.03□□□□□ -1.76
TPM1-225ENST00000560679 ROMO1P60602 79 aa4.01□□□□□ -1.77
TPM1-225ENST00000560679 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 279.4 ms