RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 C7orf65Q6ZTY9 151 aa4.02□□□□□ -1.77
LRRC28-219ENST00000560483 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
LRRC28-219ENST00000560483 FAM240AA0A1B0GVK7 77 aa3.99□□□□□ -1.77
LRRC28-219ENST00000560483 ATP5EP2Q5VTU8 51 aa3.99□□□□□ -1.77
LRRC28-219ENST00000560483 Q5W150 140 aa3.99□□□□□ -1.77
LRRC28-219ENST00000560483 J3QR89 54 aa3.98□□□□□ -1.77
LRRC28-219ENST00000560483 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
LRRC28-219ENST00000560483 MPLKIPQ8TAP9 179 aa3.97□□□□□ -1.77
LRRC28-219ENST00000560483 C4orf26Q17RF5 130 aa3.94□□□□□ -1.78
LRRC28-219ENST00000560483 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
LRRC28-219ENST00000560483 LINC00643Q86TS7 51 aa3.94□□□□□ -1.78
LRRC28-219ENST00000560483 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
LRRC28-219ENST00000560483 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
LRRC28-219ENST00000560483 A0A087WVE0 104 aa3.92□□□□□ -1.78
LRRC28-219ENST00000560483 TRAV22A0A0B4J277 110 aa3.91□□□□□ -1.78
LRRC28-219ENST00000560483 H0Y9P7 68 aa3.89□□□□□ -1.79
LRRC28-219ENST00000560483 UQCRQO14949 82 aa3.89□□□□□ -1.79
LRRC28-219ENST00000560483 SCGB1A1P11684 91 aa3.89□□□□□ -1.79
LRRC28-219ENST00000560483 KRTAP10-10P60014 251 aa3.89□□□□□ -1.79
LRRC28-219ENST00000560483 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
LRRC28-219ENST00000560483 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
LRRC28-219ENST00000560483 LOC101927531A0A1B0GV80 90 aa3.87□□□□□ -1.79
LRRC28-219ENST00000560483 ATOX1O00244 68 aa3.87□□□□□ -1.79
LRRC28-219ENST00000560483 MP68P56378 58 aa3.86□□□□□ -1.79
LRRC28-219ENST00000560483 CYP4F30PQ9H0H9 118 aa3.86□□□□□ -1.79
LRRC28-219ENST00000560483 S4R3F8 94 aa3.86□□□□□ -1.79
LRRC28-219ENST00000560483 K7ERU9 68 aa3.85□□□□□ -1.79
LRRC28-219ENST00000560483 MT2AP02795 61 aa3.85□□□□□ -1.79
LRRC28-219ENST00000560483 LINC00208Q96KT6 92 aa3.84□□□□□ -1.79
LRRC28-219ENST00000560483 FAM236AA0A1B0GUQ0 79 aa3.83□□□□□ -1.8
LRRC28-219ENST00000560483 FAM236BA0A1B0GV22 79 aa3.83□□□□□ -1.8
LRRC28-219ENST00000560483 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
LRRC28-219ENST00000560483 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
LRRC28-219ENST00000560483 MT1FP04733 61 aa3.82□□□□□ -1.8
LRRC28-219ENST00000560483 CSAG1Q6PB30 78 aa3.8□□□□□ -1.8
LRRC28-219ENST00000560483 LCA10Q71F78 164 aa3.79□□□□□ -1.8
LRRC28-219ENST00000560483 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
LRRC28-219ENST00000560483 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
LRRC28-219ENST00000560483 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
LRRC28-219ENST00000560483 OCR1Q9BZK8 76 aa3.78□□□□□ -1.8
LRRC28-219ENST00000560483 KLKP1Q107X0 134 aa3.76□□□□□ -1.81
LRRC28-219ENST00000560483 NDUFC1O43677 76 aa3.75□□□□□ -1.81
LRRC28-219ENST00000560483 IMUPQ9GZP8 106 aa3.75□□□□□ -1.81
LRRC28-219ENST00000560483 H3BPC8 53 aa3.74□□□□□ -1.81
LRRC28-219ENST00000560483 A8MUN3 132 aa3.73□□□□□ -1.81
LRRC28-219ENST00000560483 USH2AO75445 5202 aa3.72□□□□□ -1.81
LRRC28-219ENST00000560483 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
LRRC28-219ENST00000560483 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
LRRC28-219ENST00000560483 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
LRRC28-219ENST00000560483 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
LRRC28-219ENST00000560483 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
LRRC28-219ENST00000560483 SNURFQ9Y675 71 aa3.66□□□□□ -1.82
LRRC28-219ENST00000560483 CHKB-CPT1BH3BT56 60 aa3.64□□□□□ -1.83
LRRC28-219ENST00000560483 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
LRRC28-219ENST00000560483 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
LRRC28-219ENST00000560483 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
LRRC28-219ENST00000560483 ACYP2P14621 99 aa3.63□□□□□ -1.83
LRRC28-219ENST00000560483 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
LRRC28-219ENST00000560483 Q5VV11 94 aa3.61□□□□□ -1.83
LRRC28-219ENST00000560483 SERP2Q8N6R1 65 aa3.61□□□□□ -1.83
LRRC28-219ENST00000560483 PSPHP1O15172 72 aa3.6□□□□□ -1.83
LRRC28-219ENST00000560483 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
LRRC28-219ENST00000560483 CRIPTQ9P021 101 aa3.6□□□□□ -1.83
LRRC28-219ENST00000560483 H0YAA0 97 aa3.58□□□□□ -1.84
LRRC28-219ENST00000560483 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
LRRC28-219ENST00000560483 MT3P25713 68 aa3.56□□□□□ -1.84
LRRC28-219ENST00000560483 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
LRRC28-219ENST00000560483 ANAPC13Q9BS18 74 aa3.56□□□□□ -1.84
LRRC28-219ENST00000560483 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
LRRC28-219ENST00000560483 R4GN34 69 aa3.56□□□□□ -1.84
LRRC28-219ENST00000560483 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
LRRC28-219ENST00000560483 A6NN06 94 aa3.54□□□□□ -1.84
LRRC28-219ENST00000560483 M0QZ58 72 aa3.54□□□□□ -1.84
LRRC28-219ENST00000560483 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
LRRC28-219ENST00000560483 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
LRRC28-219ENST00000560483 COX7CP15954 63 aa3.53□□□□□ -1.84
LRRC28-219ENST00000560483 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
LRRC28-219ENST00000560483 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
LRRC28-219ENST00000560483 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
LRRC28-219ENST00000560483 P0C880 135 aa3.52□□□□□ -1.85
LRRC28-219ENST00000560483 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
LRRC28-219ENST00000560483 MT1BP07438 61 aa3.5□□□□□ -1.85
LRRC28-219ENST00000560483 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
LRRC28-219ENST00000560483 COA5Q86WW8 74 aa3.47□□□□□ -1.85
LRRC28-219ENST00000560483 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
LRRC28-219ENST00000560483 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
LRRC28-219ENST00000560483 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
LRRC28-219ENST00000560483 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
LRRC28-219ENST00000560483 H7BZZ5 65 aa3.42□□□□□ -1.86
LRRC28-219ENST00000560483 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
LRRC28-219ENST00000560483 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
LRRC28-219ENST00000560483 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
LRRC28-219ENST00000560483 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
LRRC28-219ENST00000560483 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
LRRC28-219ENST00000560483 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
LRRC28-219ENST00000560483 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
LRRC28-219ENST00000560483 A0A0D9SG42 100 aa3.34□□□□□ -1.87
LRRC28-219ENST00000560483 A0A1B0GU69 56 aa3.34□□□□□ -1.87
LRRC28-219ENST00000560483 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
LRRC28-219ENST00000560483 MT1XP80297 61 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms