RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 LRP2P98164 4655 aa3.81□□□□□ -1.8
HMBOX1-214ENST00000560357 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
HMBOX1-214ENST00000560357 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
HMBOX1-214ENST00000560357 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
HMBOX1-214ENST00000560357 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
HMBOX1-214ENST00000560357 SEC61BP60468 96 aaKnown RBP3.8□□□□□ -1.8
HMBOX1-214ENST00000560357 KLKP1Q107X0 134 aa3.8□□□□□ -1.8
HMBOX1-214ENST00000560357 SNURFQ9Y675 71 aa3.8□□□□□ -1.8
HMBOX1-214ENST00000560357 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
HMBOX1-214ENST00000560357 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
HMBOX1-214ENST00000560357 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
HMBOX1-214ENST00000560357 FAM236DA0A1B0GTK5 79 aa3.78□□□□□ -1.8
HMBOX1-214ENST00000560357 FAM236CP0DP71 79 aa3.78□□□□□ -1.8
HMBOX1-214ENST00000560357 SPINK7P58062 85 aa3.78□□□□□ -1.8
HMBOX1-214ENST00000560357 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
HMBOX1-214ENST00000560357 TMEM258P61165 79 aa3.77□□□□□ -1.81
HMBOX1-214ENST00000560357 C7orf65Q6ZTY9 151 aa3.77□□□□□ -1.81
HMBOX1-214ENST00000560357 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
HMBOX1-214ENST00000560357 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
HMBOX1-214ENST00000560357 KRTAP4-1Q9BYQ7 146 aa3.75□□□□□ -1.81
HMBOX1-214ENST00000560357 H7BZZ5 65 aa3.74□□□□□ -1.81
HMBOX1-214ENST00000560357 NDUFC1O43677 76 aa3.74□□□□□ -1.81
HMBOX1-214ENST00000560357 HRES1P13985 223 aa3.73□□□□□ -1.81
HMBOX1-214ENST00000560357 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
HMBOX1-214ENST00000560357 MPLKIPQ8TAP9 179 aa3.7□□□□□ -1.82
HMBOX1-214ENST00000560357 COX6B2Q6YFQ2 88 aa3.68□□□□□ -1.82
HMBOX1-214ENST00000560357 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
HMBOX1-214ENST00000560357 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
HMBOX1-214ENST00000560357 SMIM26A0A096LP01 95 aa3.65□□□□□ -1.83
HMBOX1-214ENST00000560357 DMAC1Q96GE9 116 aa3.65□□□□□ -1.83
HMBOX1-214ENST00000560357 RBM12B-AS1Q9P1G2 102 aa3.65□□□□□ -1.83
HMBOX1-214ENST00000560357 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
HMBOX1-214ENST00000560357 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
HMBOX1-214ENST00000560357 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
HMBOX1-214ENST00000560357 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
HMBOX1-214ENST00000560357 A8MUN3 132 aa3.63□□□□□ -1.83
HMBOX1-214ENST00000560357 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
HMBOX1-214ENST00000560357 MUC2Q02817 5179 aa3.62□□□□□ -1.83
HMBOX1-214ENST00000560357 ACYP2P14621 99 aa3.61□□□□□ -1.83
HMBOX1-214ENST00000560357 H1FX-AS1Q4G0G2 97 aa3.61□□□□□ -1.83
HMBOX1-214ENST00000560357 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
HMBOX1-214ENST00000560357 COA5Q86WW8 74 aa3.58□□□□□ -1.84
HMBOX1-214ENST00000560357 S4R3F8 94 aa3.55□□□□□ -1.84
HMBOX1-214ENST00000560357 CHKB-CPT1BH3BT56 60 aa3.54□□□□□ -1.84
HMBOX1-214ENST00000560357 LCA10Q71F78 164 aa3.54□□□□□ -1.84
HMBOX1-214ENST00000560357 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
HMBOX1-214ENST00000560357 MT1HP80294 61 aa3.5□□□□□ -1.85
HMBOX1-214ENST00000560357 CSAG1Q6PB30 78 aa3.49□□□□□ -1.85
HMBOX1-214ENST00000560357 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
HMBOX1-214ENST00000560357 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
HMBOX1-214ENST00000560357 PSPHP1O15172 72 aa3.46□□□□□ -1.86
HMBOX1-214ENST00000560357 M0R2T5 61 aa3.44□□□□□ -1.86
HMBOX1-214ENST00000560357 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
HMBOX1-214ENST00000560357 H0YAA0 97 aa3.41□□□□□ -1.86
HMBOX1-214ENST00000560357 Q1T7F1 81 aa3.41□□□□□ -1.86
HMBOX1-214ENST00000560357 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
HMBOX1-214ENST00000560357 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
HMBOX1-214ENST00000560357 ADM2Q7Z4H4 148 aa3.39□□□□□ -1.87
HMBOX1-214ENST00000560357 A0A1B0GU69 56 aa3.37□□□□□ -1.87
HMBOX1-214ENST00000560357 P0C880 135 aa3.36□□□□□ -1.87
HMBOX1-214ENST00000560357 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
HMBOX1-214ENST00000560357 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
HMBOX1-214ENST00000560357 MT2AP02795 61 aa3.35□□□□□ -1.87
HMBOX1-214ENST00000560357 A6NN06 94 aa3.33□□□□□ -1.88
HMBOX1-214ENST00000560357 MT1FP04733 61 aa3.33□□□□□ -1.88
HMBOX1-214ENST00000560357 Q5VV11 94 aa3.33□□□□□ -1.88
HMBOX1-214ENST00000560357 A0A1B0GU33 70 aa3.31□□□□□ -1.88
HMBOX1-214ENST00000560357 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
HMBOX1-214ENST00000560357 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
HMBOX1-214ENST00000560357 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
HMBOX1-214ENST00000560357 M0QZ58 72 aa3.27□□□□□ -1.89
HMBOX1-214ENST00000560357 UQCR11O14957 56 aa3.26□□□□□ -1.89
HMBOX1-214ENST00000560357 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
HMBOX1-214ENST00000560357 R4GN34 69 aa3.26□□□□□ -1.89
HMBOX1-214ENST00000560357 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
HMBOX1-214ENST00000560357 A6NED7 52 aa3.24□□□□□ -1.89
HMBOX1-214ENST00000560357 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
HMBOX1-214ENST00000560357 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
HMBOX1-214ENST00000560357 A8MU10 97 aa3.2□□□□□ -1.9
HMBOX1-214ENST00000560357 A0A0D9SG42 100 aa3.19□□□□□ -1.9
HMBOX1-214ENST00000560357 K7ERS5 55 aa3.18□□□□□ -1.9
HMBOX1-214ENST00000560357 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
HMBOX1-214ENST00000560357 KRTAP12-1P59990 96 aa3.15□□□□□ -1.91
HMBOX1-214ENST00000560357 MT1BP07438 61 aa3.14□□□□□ -1.91
HMBOX1-214ENST00000560357 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
HMBOX1-214ENST00000560357 ROMO1P60602 79 aa3.12□□□□□ -1.91
HMBOX1-214ENST00000560357 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
HMBOX1-214ENST00000560357 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
HMBOX1-214ENST00000560357 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
HMBOX1-214ENST00000560357 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
HMBOX1-214ENST00000560357 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
HMBOX1-214ENST00000560357 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
HMBOX1-214ENST00000560357 USH2AO75445 5202 aa3.09□□□□□ -1.91
HMBOX1-214ENST00000560357 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
HMBOX1-214ENST00000560357 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
HMBOX1-214ENST00000560357 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
HMBOX1-214ENST00000560357 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
HMBOX1-214ENST00000560357 MT1XP80297 61 aa3.01□□□□□ -1.93
HMBOX1-214ENST00000560357 LCE1EQ5T753 118 aa3□□□□□ -1.93
HMBOX1-214ENST00000560357 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms