RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 Q6ZSA8 131 aa2.99□□□□□ -1.93
CTDSPL2-206ENST00000559175 RYR1P21817 5038 aa2.98□□□□□ -1.93
CTDSPL2-206ENST00000559175 TENM1Q9UKZ4 2725 aa2.97□□□□□ -1.93
CTDSPL2-206ENST00000559175 K7EIL1 84 aa2.97□□□□□ -1.93
CTDSPL2-206ENST00000559175 A0A096LNI7 61 aa2.97□□□□□ -1.93
CTDSPL2-206ENST00000559175 INE1O15225 51 aa2.96□□□□□ -1.94
CTDSPL2-206ENST00000559175 SPRR1AP35321 89 aa2.95□□□□□ -1.94
CTDSPL2-206ENST00000559175 APLNQ9ULZ1 77 aa2.95□□□□□ -1.94
CTDSPL2-206ENST00000559175 DMBT1Q9UGM3 2413 aaPredicted RBP2.94□□□□□ -1.94
CTDSPL2-206ENST00000559175 MGAM2Q2M2H8 2515 aa2.94□□□□□ -1.94
CTDSPL2-206ENST00000559175 H1FX-AS1Q4G0G2 97 aa2.94□□□□□ -1.94
CTDSPL2-206ENST00000559175 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
CTDSPL2-206ENST00000559175 NBEAL2Q6ZNJ1 2754 aa2.94□□□□□ -1.94
CTDSPL2-206ENST00000559175 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
CTDSPL2-206ENST00000559175 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
CTDSPL2-206ENST00000559175 VWFP04275 2813 aa2.91□□□□□ -1.94
CTDSPL2-206ENST00000559175 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
CTDSPL2-206ENST00000559175 PKD1L1Q8TDX9 2849 aa2.91□□□□□ -1.94
CTDSPL2-206ENST00000559175 EPPK1P58107 5090 aaKnown RBP2.89□□□□□ -1.95
CTDSPL2-206ENST00000559175 SPRR1BP22528 89 aa2.89□□□□□ -1.95
CTDSPL2-206ENST00000559175 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
CTDSPL2-206ENST00000559175 NOTCH1P46531 2555 aa2.87□□□□□ -1.95
CTDSPL2-206ENST00000559175 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
CTDSPL2-206ENST00000559175 COX6B2Q6YFQ2 88 aa2.87□□□□□ -1.95
CTDSPL2-206ENST00000559175 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
CTDSPL2-206ENST00000559175 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
CTDSPL2-206ENST00000559175 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
CTDSPL2-206ENST00000559175 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
CTDSPL2-206ENST00000559175 COL6A5A8TX70 2615 aa2.84□□□□□ -1.96
CTDSPL2-206ENST00000559175 STAB1Q9NY15 2570 aa2.83□□□□□ -1.96
CTDSPL2-206ENST00000559175 A0A0D9SG42 100 aa2.83□□□□□ -1.96
CTDSPL2-206ENST00000559175 KRTAP1-5Q9BYS1 174 aa2.82□□□□□ -1.96
CTDSPL2-206ENST00000559175 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
CTDSPL2-206ENST00000559175 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
CTDSPL2-206ENST00000559175 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
CTDSPL2-206ENST00000559175 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
CTDSPL2-206ENST00000559175 SRRM2Q9UQ35 2752 aaKnown RBP2.79□□□□□ -1.96
CTDSPL2-206ENST00000559175 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
CTDSPL2-206ENST00000559175 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
CTDSPL2-206ENST00000559175 KRTAP9-6A0A140TA67 174 aa2.78□□□□□ -1.96
CTDSPL2-206ENST00000559175 KRTAP9-7A8MTY7 169 aa2.78□□□□□ -1.96
CTDSPL2-206ENST00000559175 MYCBP2O75592 4640 aa2.78□□□□□ -1.97
CTDSPL2-206ENST00000559175 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
CTDSPL2-206ENST00000559175 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CTDSPL2-206ENST00000559175 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL2-206ENST00000559175 TGP01266 2768 aa2.75□□□□□ -1.97
CTDSPL2-206ENST00000559175 KRTAP17-1Q9BYP8 105 aa2.75□□□□□ -1.97
CTDSPL2-206ENST00000559175 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
CTDSPL2-206ENST00000559175 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
CTDSPL2-206ENST00000559175 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
CTDSPL2-206ENST00000559175 KRTAP10-6P60371 365 aaPredicted RBP2.72□□□□□ -1.97
CTDSPL2-206ENST00000559175 STAB2Q8WWQ8 2551 aa2.72□□□□□ -1.97
CTDSPL2-206ENST00000559175 S4R3F8 94 aa2.72□□□□□ -1.97
CTDSPL2-206ENST00000559175 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
CTDSPL2-206ENST00000559175 TENM3Q9P273 2699 aa2.69□□□□□ -1.98
CTDSPL2-206ENST00000559175 TENM2Q9NT68 2774 aa2.69□□□□□ -1.98
CTDSPL2-206ENST00000559175 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
CTDSPL2-206ENST00000559175 HMCN2Q8NDA2 5059 aa2.67□□□□□ -1.98
CTDSPL2-206ENST00000559175 HERC1Q15751 4861 aa2.64□□□□□ -1.99
CTDSPL2-206ENST00000559175 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
CTDSPL2-206ENST00000559175 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
CTDSPL2-206ENST00000559175 LRP2P98164 4655 aa2.63□□□□□ -1.99
CTDSPL2-206ENST00000559175 KRTAP10-1P60331 282 aa2.61□□□□□ -1.99
CTDSPL2-206ENST00000559175 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
CTDSPL2-206ENST00000559175 MT1HL1P0DM35 61 aa2.59□□□□□ -2
CTDSPL2-206ENST00000559175 C9orf92A6NGG3 77 aa2.58□□□□□ -2
CTDSPL2-206ENST00000559175 SMR3BP02814 79 aaPredicted RBP2.57□□□□□ -2
CTDSPL2-206ENST00000559175 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
CTDSPL2-206ENST00000559175 MT3P25713 68 aa2.55□□□□□ -2
CTDSPL2-206ENST00000559175 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
CTDSPL2-206ENST00000559175 KRTAP19-2Q3LHN2 52 aa2.5□□□□□ -2.01
CTDSPL2-206ENST00000559175 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CTDSPL2-206ENST00000559175 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
CTDSPL2-206ENST00000559175 KRTAP4-5Q9BYR2 181 aa2.47□□□□□ -2.01
CTDSPL2-206ENST00000559175 Q5VSD8 79 aa2.45□□□□□ -2.02
CTDSPL2-206ENST00000559175 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
CTDSPL2-206ENST00000559175 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CTDSPL2-206ENST00000559175 KRTAP4-8Q9BYQ9 185 aa2.4□□□□□ -2.02
CTDSPL2-206ENST00000559175 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
CTDSPL2-206ENST00000559175 KRTAP10-12P60413 245 aa2.39□□□□□ -2.03
CTDSPL2-206ENST00000559175 M0QZ58 72 aa2.38□□□□□ -2.03
CTDSPL2-206ENST00000559175 LCE3BQ5TA77 95 aa2.37□□□□□ -2.03
CTDSPL2-206ENST00000559175 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
CTDSPL2-206ENST00000559175 FAT4Q6V0I7 4981 aa2.35□□□□□ -2.03
CTDSPL2-206ENST00000559175 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.32□□□□□ -2.04
CTDSPL2-206ENST00000559175 KRTAP9-2Q9BYQ4 174 aa2.31□□□□□ -2.04
CTDSPL2-206ENST00000559175 UBR4Q5T4S7 5183 aa2.31□□□□□ -2.04
CTDSPL2-206ENST00000559175 KRTAP4-8A0A0G2JLE6 195 aa2.31□□□□□ -2.04
CTDSPL2-206ENST00000559175 LPAP08519 4548 aa2.3□□□□□ -2.04
CTDSPL2-206ENST00000559175 KRTAP9-8Q9BYQ0 159 aa2.29□□□□□ -2.04
CTDSPL2-206ENST00000559175 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
CTDSPL2-206ENST00000559175 KRTAP6-3Q3LI67 103 aa2.28□□□□□ -2.04
CTDSPL2-206ENST00000559175 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
CTDSPL2-206ENST00000559175 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CTDSPL2-206ENST00000559175 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
CTDSPL2-206ENST00000559175 KRTAP10-7P60409 375 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-206ENST00000559175 M0R2T5 61 aa2.22□□□□□ -2.05
CTDSPL2-206ENST00000559175 TNP1P09430 55 aa2.21□□□□□ -2.06
CTDSPL2-206ENST00000559175 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
CTDSPL2-206ENST00000559175 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms