RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 A8MU10 97 aa5.94□□□□□ -1.46
CLPX-204ENST00000559152 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
CLPX-204ENST00000559152 UQCR11O14957 56 aa5.92□□□□□ -1.46
CLPX-204ENST00000559152 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
CLPX-204ENST00000559152 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
CLPX-204ENST00000559152 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
CLPX-204ENST00000559152 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
CLPX-204ENST00000559152 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
CLPX-204ENST00000559152 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
CLPX-204ENST00000559152 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
CLPX-204ENST00000559152 A6NN06 94 aa5.82□□□□□ -1.48
CLPX-204ENST00000559152 J3QL48 77 aa5.79□□□□□ -1.48
CLPX-204ENST00000559152 HERC1Q15751 4861 aa5.78□□□□□ -1.48
CLPX-204ENST00000559152 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
CLPX-204ENST00000559152 A0A1B0GU33 70 aa5.76□□□□□ -1.49
CLPX-204ENST00000559152 S4R3F8 94 aa5.75□□□□□ -1.49
CLPX-204ENST00000559152 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
CLPX-204ENST00000559152 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
CLPX-204ENST00000559152 H0YAA0 97 aa5.68□□□□□ -1.5
CLPX-204ENST00000559152 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
CLPX-204ENST00000559152 LPAP08519 4548 aa5.67□□□□□ -1.5
CLPX-204ENST00000559152 LRP2P98164 4655 aa5.61□□□□□ -1.51
CLPX-204ENST00000559152 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
CLPX-204ENST00000559152 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
CLPX-204ENST00000559152 K7ERS5 55 aa5.6□□□□□ -1.51
CLPX-204ENST00000559152 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
CLPX-204ENST00000559152 ADM2Q7Z4H4 148 aa5.53□□□□□ -1.52
CLPX-204ENST00000559152 P0C880 135 aa5.51□□□□□ -1.53
CLPX-204ENST00000559152 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
CLPX-204ENST00000559152 M0QZ58 72 aa5.46□□□□□ -1.54
CLPX-204ENST00000559152 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
CLPX-204ENST00000559152 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
CLPX-204ENST00000559152 A0A0D9SG42 100 aa5.44□□□□□ -1.54
CLPX-204ENST00000559152 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
CLPX-204ENST00000559152 KRTAP4-1Q9BYQ7 146 aa5.43□□□□□ -1.54
CLPX-204ENST00000559152 MUC2Q02817 5179 aa5.43□□□□□ -1.54
CLPX-204ENST00000559152 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
CLPX-204ENST00000559152 ROMO1P60602 79 aa5.37□□□□□ -1.55
CLPX-204ENST00000559152 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
CLPX-204ENST00000559152 R4GN34 69 aa5.33□□□□□ -1.56
CLPX-204ENST00000559152 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
CLPX-204ENST00000559152 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
CLPX-204ENST00000559152 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
CLPX-204ENST00000559152 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
CLPX-204ENST00000559152 LINC01554Q52M75 96 aa5.29□□□□□ -1.56
CLPX-204ENST00000559152 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
CLPX-204ENST00000559152 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
CLPX-204ENST00000559152 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
CLPX-204ENST00000559152 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
CLPX-204ENST00000559152 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
CLPX-204ENST00000559152 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
CLPX-204ENST00000559152 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
CLPX-204ENST00000559152 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
CLPX-204ENST00000559152 M0R2T5 61 aa5.04□□□□□ -1.6
CLPX-204ENST00000559152 LCE2BO14633 110 aa5.04□□□□□ -1.6
CLPX-204ENST00000559152 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
CLPX-204ENST00000559152 MT1HP80294 61 aa5.01□□□□□ -1.61
CLPX-204ENST00000559152 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
CLPX-204ENST00000559152 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
CLPX-204ENST00000559152 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
CLPX-204ENST00000559152 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
CLPX-204ENST00000559152 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
CLPX-204ENST00000559152 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
CLPX-204ENST00000559152 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
CLPX-204ENST00000559152 MT2AP02795 61 aa4.88□□□□□ -1.63
CLPX-204ENST00000559152 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
CLPX-204ENST00000559152 MT1FP04733 61 aa4.85□□□□□ -1.63
CLPX-204ENST00000559152 TNP1P09430 55 aa4.85□□□□□ -1.63
CLPX-204ENST00000559152 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CLPX-204ENST00000559152 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
CLPX-204ENST00000559152 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
CLPX-204ENST00000559152 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CLPX-204ENST00000559152 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
CLPX-204ENST00000559152 MT1BP07438 61 aa4.66□□□□□ -1.66
CLPX-204ENST00000559152 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
CLPX-204ENST00000559152 MT1XP80297 61 aa4.58□□□□□ -1.68
CLPX-204ENST00000559152 PRO2289Q9P1D8 64 aa4.58□□□□□ -1.68
CLPX-204ENST00000559152 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
CLPX-204ENST00000559152 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
CLPX-204ENST00000559152 USH2AO75445 5202 aa4.56□□□□□ -1.68
CLPX-204ENST00000559152 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
CLPX-204ENST00000559152 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
CLPX-204ENST00000559152 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
CLPX-204ENST00000559152 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
CLPX-204ENST00000559152 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
CLPX-204ENST00000559152 H3BS24 57 aa4.47□□□□□ -1.69
CLPX-204ENST00000559152 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
CLPX-204ENST00000559152 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
CLPX-204ENST00000559152 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
CLPX-204ENST00000559152 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
CLPX-204ENST00000559152 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
CLPX-204ENST00000559152 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
CLPX-204ENST00000559152 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
CLPX-204ENST00000559152 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
CLPX-204ENST00000559152 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
CLPX-204ENST00000559152 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
CLPX-204ENST00000559152 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
CLPX-204ENST00000559152 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
CLPX-204ENST00000559152 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
CLPX-204ENST00000559152 KMT2DO14686 5537 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms