RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 C1orf64Q8NEQ6 169 aa5.44□□□□□ -1.54
SNX1-204ENST00000559061 KLKP1Q107X0 134 aa5.43□□□□□ -1.54
SNX1-204ENST00000559061 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
SNX1-204ENST00000559061 FSIP2Q5CZC0 6907 aa5.42□□□□□ -1.54
SNX1-204ENST00000559061 IMUPQ9GZP8 106 aa5.42□□□□□ -1.54
SNX1-204ENST00000559061 ATOX1O00244 68 aa5.41□□□□□ -1.54
SNX1-204ENST00000559061 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
SNX1-204ENST00000559061 LCA10Q71F78 164 aa5.39□□□□□ -1.55
SNX1-204ENST00000559061 USH2AO75445 5202 aa5.37□□□□□ -1.55
SNX1-204ENST00000559061 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
SNX1-204ENST00000559061 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
SNX1-204ENST00000559061 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
SNX1-204ENST00000559061 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
SNX1-204ENST00000559061 C5orf47Q569G3 176 aa5.36□□□□□ -1.55
SNX1-204ENST00000559061 S4R3F8 94 aa5.36□□□□□ -1.55
SNX1-204ENST00000559061 MP68P56378 58 aa5.33□□□□□ -1.56
SNX1-204ENST00000559061 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
SNX1-204ENST00000559061 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
SNX1-204ENST00000559061 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
SNX1-204ENST00000559061 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
SNX1-204ENST00000559061 H3BPC8 53 aa5.31□□□□□ -1.56
SNX1-204ENST00000559061 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
SNX1-204ENST00000559061 TRAV7A0A075B6U4 112 aa5.3□□□□□ -1.56
SNX1-204ENST00000559061 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
SNX1-204ENST00000559061 A8MUN3 132 aa5.25□□□□□ -1.57
SNX1-204ENST00000559061 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
SNX1-204ENST00000559061 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
SNX1-204ENST00000559061 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
SNX1-204ENST00000559061 SNURFQ9Y675 71 aa5.2□□□□□ -1.58
SNX1-204ENST00000559061 SERP2Q8N6R1 65 aa5.19□□□□□ -1.58
SNX1-204ENST00000559061 NDUFC1O43677 76 aa5.16□□□□□ -1.58
SNX1-204ENST00000559061 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
SNX1-204ENST00000559061 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
SNX1-204ENST00000559061 H0YAA0 97 aa5.14□□□□□ -1.59
SNX1-204ENST00000559061 MT1BP07438 61 aa5.13□□□□□ -1.59
SNX1-204ENST00000559061 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
SNX1-204ENST00000559061 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
SNX1-204ENST00000559061 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
SNX1-204ENST00000559061 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
SNX1-204ENST00000559061 COX7CP15954 63 aa5.09□□□□□ -1.59
SNX1-204ENST00000559061 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
SNX1-204ENST00000559061 SPANXA2-OT1Q8N9U9 137 aa5.07□□□□□ -1.6
SNX1-204ENST00000559061 P0C880 135 aa5.06□□□□□ -1.6
SNX1-204ENST00000559061 ACYP2P14621 99 aa5.05□□□□□ -1.6
SNX1-204ENST00000559061 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
SNX1-204ENST00000559061 H7BZZ5 65 aa5.02□□□□□ -1.61
SNX1-204ENST00000559061 Q5VV11 94 aa5□□□□□ -1.61
SNX1-204ENST00000559061 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
SNX1-204ENST00000559061 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
SNX1-204ENST00000559061 CCDC179H3BU77 68 aa4.96□□□□□ -1.62
SNX1-204ENST00000559061 COA5Q86WW8 74 aa4.94□□□□□ -1.62
SNX1-204ENST00000559061 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
SNX1-204ENST00000559061 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
SNX1-204ENST00000559061 SPTSSBQ8NFR3 76 aa4.89□□□□□ -1.63
SNX1-204ENST00000559061 M0QZ58 72 aa4.88□□□□□ -1.63
SNX1-204ENST00000559061 R4GN34 69 aa4.88□□□□□ -1.63
SNX1-204ENST00000559061 A6NN06 94 aa4.86□□□□□ -1.63
SNX1-204ENST00000559061 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
SNX1-204ENST00000559061 MT1XP80297 61 aa4.85□□□□□ -1.63
SNX1-204ENST00000559061 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
SNX1-204ENST00000559061 H3BS24 57 aa4.82□□□□□ -1.64
SNX1-204ENST00000559061 PCP4P48539 62 aa4.82□□□□□ -1.64
SNX1-204ENST00000559061 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
SNX1-204ENST00000559061 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
SNX1-204ENST00000559061 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
SNX1-204ENST00000559061 TMEM258P61165 79 aa4.7□□□□□ -1.66
SNX1-204ENST00000559061 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
SNX1-204ENST00000559061 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
SNX1-204ENST00000559061 KMT2DO14686 5537 aa4.67□□□□□ -1.66
SNX1-204ENST00000559061 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
SNX1-204ENST00000559061 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.67
SNX1-204ENST00000559061 A0A1B0GU33 70 aa4.64□□□□□ -1.67
SNX1-204ENST00000559061 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
SNX1-204ENST00000559061 SEC61GP60059 68 aa4.63□□□□□ -1.67
SNX1-204ENST00000559061 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
SNX1-204ENST00000559061 A0A1B0GU69 56 aa4.62□□□□□ -1.67
SNX1-204ENST00000559061 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
SNX1-204ENST00000559061 A0A0D9SG42 100 aa4.6□□□□□ -1.67
SNX1-204ENST00000559061 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
SNX1-204ENST00000559061 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
SNX1-204ENST00000559061 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
SNX1-204ENST00000559061 NEBP20929 6669 aa4.58□□□□□ -1.68
SNX1-204ENST00000559061 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
SNX1-204ENST00000559061 A8MU10 97 aa4.56□□□□□ -1.68
SNX1-204ENST00000559061 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
SNX1-204ENST00000559061 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
SNX1-204ENST00000559061 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
SNX1-204ENST00000559061 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
SNX1-204ENST00000559061 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
SNX1-204ENST00000559061 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
SNX1-204ENST00000559061 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
SNX1-204ENST00000559061 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
SNX1-204ENST00000559061 Q1T7F1 81 aa4.41□□□□□ -1.7
SNX1-204ENST00000559061 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
SNX1-204ENST00000559061 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
SNX1-204ENST00000559061 UQCR11O14957 56 aa4.37□□□□□ -1.71
SNX1-204ENST00000559061 PSPHP1O15172 72 aa4.37□□□□□ -1.71
SNX1-204ENST00000559061 SPRR2EP22531 72 aa4.34□□□□□ -1.71
SNX1-204ENST00000559061 SPRR2BP35325 72 aa4.34□□□□□ -1.71
SNX1-204ENST00000559061 SPRR2AP35326 72 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms