RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PRR15Q8IV56 129 aa3.52□□□□□ -1.85
SPG11-213ENST00000558988 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
SPG11-213ENST00000558988 K7EQZ3 153 aa3.51□□□□□ -1.85
SPG11-213ENST00000558988 MRPL34Q9BQ48 92 aaKnown RBP3.51□□□□□ -1.85
SPG11-213ENST00000558988 hDV103S1A0JD37 113 aa3.5□□□□□ -1.85
SPG11-213ENST00000558988 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
SPG11-213ENST00000558988 A0A1B0GW54 56 aa3.49□□□□□ -1.85
SPG11-213ENST00000558988 TSTD3H0UI37 97 aa3.49□□□□□ -1.85
SPG11-213ENST00000558988 USH2AO75445 5202 aa3.48□□□□□ -1.85
SPG11-213ENST00000558988 FAM240AA0A1B0GVK7 77 aa3.48□□□□□ -1.85
SPG11-213ENST00000558988 BPY2O14599 106 aa3.48□□□□□ -1.85
SPG11-213ENST00000558988 SMIM6P0DI80 62 aa3.47□□□□□ -1.85
SPG11-213ENST00000558988 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
SPG11-213ENST00000558988 Q8N9L7 120 aa3.47□□□□□ -1.85
SPG11-213ENST00000558988 LINC00846Q9NV44 126 aa3.47□□□□□ -1.85
SPG11-213ENST00000558988 HCG22E2RYF7 251 aa3.45□□□□□ -1.86
SPG11-213ENST00000558988 H3BT86 120 aa3.45□□□□□ -1.86
SPG11-213ENST00000558988 Q5W150 140 aa3.45□□□□□ -1.86
SPG11-213ENST00000558988 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
SPG11-213ENST00000558988 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
SPG11-213ENST00000558988 A0A1W2PPM0 123 aa3.44□□□□□ -1.86
SPG11-213ENST00000558988 CASC2Q6XLA1 102 aa3.44□□□□□ -1.86
SPG11-213ENST00000558988 TAX1BP3O14907 124 aa3.43□□□□□ -1.86
SPG11-213ENST00000558988 C4orf26Q17RF5 130 aa3.43□□□□□ -1.86
SPG11-213ENST00000558988 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
SPG11-213ENST00000558988 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
SPG11-213ENST00000558988 FAM236AA0A1B0GUQ0 79 aa3.41□□□□□ -1.86
SPG11-213ENST00000558988 FAM236BA0A1B0GV22 79 aa3.41□□□□□ -1.86
SPG11-213ENST00000558988 SPCS1Q9Y6A9 102 aa3.41□□□□□ -1.86
SPG11-213ENST00000558988 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
SPG11-213ENST00000558988 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
SPG11-213ENST00000558988 UBL5Q9BZL1 73 aa3.37□□□□□ -1.87
SPG11-213ENST00000558988 PRO0461Q9UI25 63 aa3.37□□□□□ -1.87
SPG11-213ENST00000558988 PSPHP1O15172 72 aa3.36□□□□□ -1.87
SPG11-213ENST00000558988 S4R3F8 94 aa3.36□□□□□ -1.87
SPG11-213ENST00000558988 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
SPG11-213ENST00000558988 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
SPG11-213ENST00000558988 C1orf64Q8NEQ6 169 aa3.34□□□□□ -1.87
SPG11-213ENST00000558988 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
SPG11-213ENST00000558988 K7EP34 96 aa3.32□□□□□ -1.88
SPG11-213ENST00000558988 COL5A1-AS1Q5SY13 56 aa3.32□□□□□ -1.88
SPG11-213ENST00000558988 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
SPG11-213ENST00000558988 LCA10Q71F78 164 aa3.32□□□□□ -1.88
SPG11-213ENST00000558988 A6NN06 94 aa3.31□□□□□ -1.88
SPG11-213ENST00000558988 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
SPG11-213ENST00000558988 Q5VV11 94 aa3.31□□□□□ -1.88
SPG11-213ENST00000558988 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
SPG11-213ENST00000558988 A8MU10 97 aa3.28□□□□□ -1.88
SPG11-213ENST00000558988 MT1BP07438 61 aa3.28□□□□□ -1.88
SPG11-213ENST00000558988 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
SPG11-213ENST00000558988 ETDBQ3ZM63 59 aa3.27□□□□□ -1.89
SPG11-213ENST00000558988 GTF2H5Q6ZYL4 71 aa3.27□□□□□ -1.89
SPG11-213ENST00000558988 A0A087WVE0 104 aa3.26□□□□□ -1.89
SPG11-213ENST00000558988 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
SPG11-213ENST00000558988 IMUPQ9GZP8 106 aa3.26□□□□□ -1.89
SPG11-213ENST00000558988 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
SPG11-213ENST00000558988 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
SPG11-213ENST00000558988 TRAV22A0A0B4J277 110 aa3.24□□□□□ -1.89
SPG11-213ENST00000558988 CYP4F30PQ9H0H9 118 aa3.24□□□□□ -1.89
SPG11-213ENST00000558988 HIST1H4AP62805 103 aaKnown RBP3.23□□□□□ -1.89
SPG11-213ENST00000558988 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
SPG11-213ENST00000558988 F8W1H4 67 aa3.22□□□□□ -1.89
SPG11-213ENST00000558988 ANAPC13Q9BS18 74 aa3.22□□□□□ -1.89
SPG11-213ENST00000558988 LOC101927531A0A1B0GV80 90 aa3.21□□□□□ -1.9
SPG11-213ENST00000558988 H0Y9P7 68 aa3.2□□□□□ -1.9
SPG11-213ENST00000558988 NDUFC1O43677 76 aa3.19□□□□□ -1.9
SPG11-213ENST00000558988 UQCRQO14949 82 aa3.17□□□□□ -1.9
SPG11-213ENST00000558988 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
SPG11-213ENST00000558988 ADM2Q7Z4H4 148 aa3.17□□□□□ -1.9
SPG11-213ENST00000558988 MP68P56378 58 aa3.16□□□□□ -1.9
SPG11-213ENST00000558988 ATP5EP2Q5VTU8 51 aa3.16□□□□□ -1.9
SPG11-213ENST00000558988 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
SPG11-213ENST00000558988 ATOX1O00244 68 aa3.15□□□□□ -1.91
SPG11-213ENST00000558988 ACYP1P07311 99 aa3.15□□□□□ -1.91
SPG11-213ENST00000558988 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
SPG11-213ENST00000558988 LINC00208Q96KT6 92 aa3.14□□□□□ -1.91
SPG11-213ENST00000558988 A8MUN3 132 aa3.13□□□□□ -1.91
SPG11-213ENST00000558988 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
SPG11-213ENST00000558988 H0YAA0 97 aa3.1□□□□□ -1.91
SPG11-213ENST00000558988 LINC00643Q86TS7 51 aa3.09□□□□□ -1.91
SPG11-213ENST00000558988 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
SPG11-213ENST00000558988 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
SPG11-213ENST00000558988 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
SPG11-213ENST00000558988 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
SPG11-213ENST00000558988 R4GN34 69 aa3.08□□□□□ -1.92
SPG11-213ENST00000558988 M0QZ58 72 aa3.07□□□□□ -1.92
SPG11-213ENST00000558988 P0C880 135 aa3.07□□□□□ -1.92
SPG11-213ENST00000558988 SPRR2EP22531 72 aa3.06□□□□□ -1.92
SPG11-213ENST00000558988 SPRR2BP35325 72 aa3.06□□□□□ -1.92
SPG11-213ENST00000558988 SPRR2AP35326 72 aa3.06□□□□□ -1.92
SPG11-213ENST00000558988 MT1XP80297 61 aa3.06□□□□□ -1.92
SPG11-213ENST00000558988 NEBP20929 6669 aa3.05□□□□□ -1.92
SPG11-213ENST00000558988 K7ERS5 55 aa3.04□□□□□ -1.92
SPG11-213ENST00000558988 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
SPG11-213ENST00000558988 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
SPG11-213ENST00000558988 C20orf197Q8N268 126 aa3.04□□□□□ -1.92
SPG11-213ENST00000558988 A0A1B0GV90 55 aa3.03□□□□□ -1.92
SPG11-213ENST00000558988 SCGB1A1P11684 91 aa3.03□□□□□ -1.92
SPG11-213ENST00000558988 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SPG11-213ENST00000558988 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms