RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 Q8N1X5 172 aa3.5□□□□□ -1.85
AC087516.2-201ENST00000558963 TNXBP22105 4242 aa3.47□□□□□ -1.85
AC087516.2-201ENST00000558963 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
AC087516.2-201ENST00000558963 H0YAA0 97 aa3.46□□□□□ -1.85
AC087516.2-201ENST00000558963 CSAG1Q6PB30 78 aa3.46□□□□□ -1.85
AC087516.2-201ENST00000558963 FLG2Q5D862 2391 aaPredicted RBP3.44□□□□□ -1.86
AC087516.2-201ENST00000558963 KRTAP3-1Q9BYR8 98 aa3.44□□□□□ -1.86
AC087516.2-201ENST00000558963 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
AC087516.2-201ENST00000558963 HSPG2P98160 4391 aa3.43□□□□□ -1.86
AC087516.2-201ENST00000558963 A0A1B0GU33 70 aa3.43□□□□□ -1.86
AC087516.2-201ENST00000558963 COX6B2Q6YFQ2 88 aa3.43□□□□□ -1.86
AC087516.2-201ENST00000558963 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
AC087516.2-201ENST00000558963 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
AC087516.2-201ENST00000558963 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
AC087516.2-201ENST00000558963 RYR1P21817 5038 aa3.39□□□□□ -1.87
AC087516.2-201ENST00000558963 FAT1Q14517 4588 aa3.39□□□□□ -1.87
AC087516.2-201ENST00000558963 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
AC087516.2-201ENST00000558963 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
AC087516.2-201ENST00000558963 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
AC087516.2-201ENST00000558963 K7ERS5 55 aa3.35□□□□□ -1.87
AC087516.2-201ENST00000558963 SMR3BP02814 79 aaPredicted RBP3.35□□□□□ -1.87
AC087516.2-201ENST00000558963 DMBT1Q9UGM3 2413 aaPredicted RBP3.33□□□□□ -1.88
AC087516.2-201ENST00000558963 ROMO1P60602 79 aa3.33□□□□□ -1.88
AC087516.2-201ENST00000558963 SEC61BP60468 96 aaKnown RBP3.31□□□□□ -1.88
AC087516.2-201ENST00000558963 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
AC087516.2-201ENST00000558963 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
AC087516.2-201ENST00000558963 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
AC087516.2-201ENST00000558963 Q5VSD8 79 aa3.28□□□□□ -1.88
AC087516.2-201ENST00000558963 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
AC087516.2-201ENST00000558963 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
AC087516.2-201ENST00000558963 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
AC087516.2-201ENST00000558963 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
AC087516.2-201ENST00000558963 S4R3F8 94 aa3.26□□□□□ -1.89
AC087516.2-201ENST00000558963 KRTAP13-4Q3LI77 160 aa3.25□□□□□ -1.89
AC087516.2-201ENST00000558963 P0C880 135 aa3.21□□□□□ -1.9
AC087516.2-201ENST00000558963 MYCBP2O75592 4640 aa3.21□□□□□ -1.9
AC087516.2-201ENST00000558963 M0QZ58 72 aa3.19□□□□□ -1.9
AC087516.2-201ENST00000558963 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
AC087516.2-201ENST00000558963 A0A0D9SG42 100 aa3.16□□□□□ -1.9
AC087516.2-201ENST00000558963 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
AC087516.2-201ENST00000558963 KRTAP12-1P59990 96 aa3.15□□□□□ -1.9
AC087516.2-201ENST00000558963 KRTAP12-2P59991 146 aa3.15□□□□□ -1.9
AC087516.2-201ENST00000558963 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
AC087516.2-201ENST00000558963 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
AC087516.2-201ENST00000558963 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
AC087516.2-201ENST00000558963 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
AC087516.2-201ENST00000558963 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
AC087516.2-201ENST00000558963 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
AC087516.2-201ENST00000558963 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
AC087516.2-201ENST00000558963 HERC1Q15751 4861 aa3.05□□□□□ -1.92
AC087516.2-201ENST00000558963 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
AC087516.2-201ENST00000558963 MUC2Q02817 5179 aa3.03□□□□□ -1.92
AC087516.2-201ENST00000558963 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
AC087516.2-201ENST00000558963 LPAP08519 4548 aa3.01□□□□□ -1.93
AC087516.2-201ENST00000558963 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
AC087516.2-201ENST00000558963 LRP2P98164 4655 aa3□□□□□ -1.93
AC087516.2-201ENST00000558963 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
AC087516.2-201ENST00000558963 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
AC087516.2-201ENST00000558963 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
AC087516.2-201ENST00000558963 KRTAP4-7Q9BYR0 210 aa2.98□□□□□ -1.93
AC087516.2-201ENST00000558963 R4GN34 69 aa2.98□□□□□ -1.93
AC087516.2-201ENST00000558963 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
AC087516.2-201ENST00000558963 KRTAP4-1Q9BYQ7 146 aa2.97□□□□□ -1.93
AC087516.2-201ENST00000558963 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
AC087516.2-201ENST00000558963 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
AC087516.2-201ENST00000558963 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
AC087516.2-201ENST00000558963 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
AC087516.2-201ENST00000558963 KRTAP19-1Q8IUB9 90 aa2.89□□□□□ -1.95
AC087516.2-201ENST00000558963 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
AC087516.2-201ENST00000558963 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.87□□□□□ -1.95
AC087516.2-201ENST00000558963 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
AC087516.2-201ENST00000558963 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
AC087516.2-201ENST00000558963 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
AC087516.2-201ENST00000558963 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
AC087516.2-201ENST00000558963 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
AC087516.2-201ENST00000558963 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
AC087516.2-201ENST00000558963 KRTAP19-4Q3LI73 84 aa2.8□□□□□ -1.96
AC087516.2-201ENST00000558963 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
AC087516.2-201ENST00000558963 TNP1P09430 55 aa2.79□□□□□ -1.96
AC087516.2-201ENST00000558963 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.97
AC087516.2-201ENST00000558963 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
AC087516.2-201ENST00000558963 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
AC087516.2-201ENST00000558963 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
AC087516.2-201ENST00000558963 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
AC087516.2-201ENST00000558963 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
AC087516.2-201ENST00000558963 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
AC087516.2-201ENST00000558963 KRTAP19-8Q3LI54 63 aa2.74□□□□□ -1.97
AC087516.2-201ENST00000558963 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
AC087516.2-201ENST00000558963 MT1HP80294 61 aa2.72□□□□□ -1.97
AC087516.2-201ENST00000558963 LCE1DQ5T752 114 aa2.71□□□□□ -1.97
AC087516.2-201ENST00000558963 MT2AP02795 61 aa2.68□□□□□ -1.98
AC087516.2-201ENST00000558963 MT1FP04733 61 aa2.65□□□□□ -1.99
AC087516.2-201ENST00000558963 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
AC087516.2-201ENST00000558963 USH2AO75445 5202 aa2.63□□□□□ -1.99
AC087516.2-201ENST00000558963 KRTAP9-3Q9BYQ3 159 aa2.62□□□□□ -1.99
AC087516.2-201ENST00000558963 M0R2T5 61 aa2.61□□□□□ -1.99
AC087516.2-201ENST00000558963 MT1BP07438 61 aa2.61□□□□□ -1.99
AC087516.2-201ENST00000558963 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
AC087516.2-201ENST00000558963 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
AC087516.2-201ENST00000558963 MT1XP80297 61 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms