RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
TPM1-216ENST00000558910 ATP5EP2Q5VTU8 51 aa5.81□□□□□ -1.48
TPM1-216ENST00000558910 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
TPM1-216ENST00000558910 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
TPM1-216ENST00000558910 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
TPM1-216ENST00000558910 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
TPM1-216ENST00000558910 LINC00643Q86TS7 51 aa5.76□□□□□ -1.49
TPM1-216ENST00000558910 HIST1H4AP62805 103 aaKnown RBP5.75□□□□□ -1.49
TPM1-216ENST00000558910 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
TPM1-216ENST00000558910 K7ERU9 68 aa5.73□□□□□ -1.49
TPM1-216ENST00000558910 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
TPM1-216ENST00000558910 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
TPM1-216ENST00000558910 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
TPM1-216ENST00000558910 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
TPM1-216ENST00000558910 SCGB1A1P11684 91 aa5.63□□□□□ -1.51
TPM1-216ENST00000558910 S4R3F8 94 aa5.63□□□□□ -1.51
TPM1-216ENST00000558910 A0A087WVE0 104 aa5.61□□□□□ -1.51
TPM1-216ENST00000558910 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
TPM1-216ENST00000558910 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
TPM1-216ENST00000558910 MACF1Q9UPN3 7388 aaKnown RBP5.61□□□□□ -1.51
TPM1-216ENST00000558910 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
TPM1-216ENST00000558910 ATOX1O00244 68 aa5.59□□□□□ -1.51
TPM1-216ENST00000558910 UQCRQO14949 82 aa5.59□□□□□ -1.51
TPM1-216ENST00000558910 LCA10Q71F78 164 aa5.59□□□□□ -1.51
TPM1-216ENST00000558910 IMUPQ9GZP8 106 aa5.59□□□□□ -1.51
TPM1-216ENST00000558910 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
TPM1-216ENST00000558910 CYP4F30PQ9H0H9 118 aa5.58□□□□□ -1.52
TPM1-216ENST00000558910 H0Y9P7 68 aa5.56□□□□□ -1.52
TPM1-216ENST00000558910 MP68P56378 58 aa5.55□□□□□ -1.52
TPM1-216ENST00000558910 CSAG1Q6PB30 78 aa5.55□□□□□ -1.52
TPM1-216ENST00000558910 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
TPM1-216ENST00000558910 SMIM20Q8N5G0 67 aa5.52□□□□□ -1.53
TPM1-216ENST00000558910 LINC00208Q96KT6 92 aa5.48□□□□□ -1.53
TPM1-216ENST00000558910 H3BPC8 53 aa5.47□□□□□ -1.53
TPM1-216ENST00000558910 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
TPM1-216ENST00000558910 KRTAP5-11Q6L8G4 156 aa5.47□□□□□ -1.53
TPM1-216ENST00000558910 MT-ATP8P03928 68 aa5.46□□□□□ -1.54
TPM1-216ENST00000558910 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
TPM1-216ENST00000558910 NEBP20929 6669 aa5.45□□□□□ -1.54
TPM1-216ENST00000558910 KLKP1Q107X0 134 aa5.44□□□□□ -1.54
TPM1-216ENST00000558910 OCR1Q9BZK8 76 aa5.43□□□□□ -1.54
TPM1-216ENST00000558910 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
TPM1-216ENST00000558910 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
TPM1-216ENST00000558910 NDUFC1O43677 76 aa5.39□□□□□ -1.55
TPM1-216ENST00000558910 MT3P25713 68 aa5.38□□□□□ -1.55
TPM1-216ENST00000558910 Q5VV11 94 aa5.38□□□□□ -1.55
TPM1-216ENST00000558910 A8MUN3 132 aa5.37□□□□□ -1.55
TPM1-216ENST00000558910 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.36□□□□□ -1.55
TPM1-216ENST00000558910 MT1BP07438 61 aa5.35□□□□□ -1.55
TPM1-216ENST00000558910 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
TPM1-216ENST00000558910 A6NN06 94 aa5.33□□□□□ -1.56
TPM1-216ENST00000558910 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
TPM1-216ENST00000558910 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
TPM1-216ENST00000558910 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
TPM1-216ENST00000558910 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
TPM1-216ENST00000558910 SEC61GP60059 68 aa5.26□□□□□ -1.57
TPM1-216ENST00000558910 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
TPM1-216ENST00000558910 ACYP2P14621 99 aa5.24□□□□□ -1.57
TPM1-216ENST00000558910 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
TPM1-216ENST00000558910 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
TPM1-216ENST00000558910 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
TPM1-216ENST00000558910 H0YAA0 97 aa5.21□□□□□ -1.58
TPM1-216ENST00000558910 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
TPM1-216ENST00000558910 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
TPM1-216ENST00000558910 P0C880 135 aa5.2□□□□□ -1.58
TPM1-216ENST00000558910 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
TPM1-216ENST00000558910 COX7CP15954 63 aa5.19□□□□□ -1.58
TPM1-216ENST00000558910 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
TPM1-216ENST00000558910 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
TPM1-216ENST00000558910 SPANXA2-OT1Q8N9U9 137 aa5.17□□□□□ -1.58
TPM1-216ENST00000558910 M0QZ58 72 aa5.16□□□□□ -1.58
TPM1-216ENST00000558910 LINC01554Q52M75 96 aa5.16□□□□□ -1.58
TPM1-216ENST00000558910 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
TPM1-216ENST00000558910 R4GN34 69 aa5.16□□□□□ -1.58
TPM1-216ENST00000558910 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
TPM1-216ENST00000558910 KMT2DO14686 5537 aa5.12□□□□□ -1.59
TPM1-216ENST00000558910 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
TPM1-216ENST00000558910 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
TPM1-216ENST00000558910 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
TPM1-216ENST00000558910 MT1XP80297 61 aa5.03□□□□□ -1.6
TPM1-216ENST00000558910 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
TPM1-216ENST00000558910 ATP5EP56381 51 aaPredicted RBP5□□□□□ -1.61
TPM1-216ENST00000558910 H7BZZ5 65 aa4.99□□□□□ -1.61
TPM1-216ENST00000558910 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
TPM1-216ENST00000558910 COA5Q86WW8 74 aa4.97□□□□□ -1.61
TPM1-216ENST00000558910 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
TPM1-216ENST00000558910 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
TPM1-216ENST00000558910 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
TPM1-216ENST00000558910 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
TPM1-216ENST00000558910 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
TPM1-216ENST00000558910 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
TPM1-216ENST00000558910 TMEM258P61165 79 aa4.9□□□□□ -1.63
TPM1-216ENST00000558910 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
TPM1-216ENST00000558910 KRTAP13-4Q3LI77 160 aa4.87□□□□□ -1.63
TPM1-216ENST00000558910 CYSTM1Q9H1C7 97 aa4.87□□□□□ -1.63
TPM1-216ENST00000558910 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
TPM1-216ENST00000558910 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
TPM1-216ENST00000558910 SPRR2EP22531 72 aa4.83□□□□□ -1.64
TPM1-216ENST00000558910 SPRR2BP35325 72 aa4.83□□□□□ -1.64
TPM1-216ENST00000558910 SPRR2AP35326 72 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms