RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
PPP1R3E-202ENST00000558058 UQCR11O14957 56 aa5.94□□□□□ -1.46
PPP1R3E-202ENST00000558058 HERC1Q15751 4861 aa5.9□□□□□ -1.46
PPP1R3E-202ENST00000558058 ROMO1P60602 79 aa5.89□□□□□ -1.47
PPP1R3E-202ENST00000558058 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
PPP1R3E-202ENST00000558058 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
PPP1R3E-202ENST00000558058 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
PPP1R3E-202ENST00000558058 LPAP08519 4548 aa5.88□□□□□ -1.47
PPP1R3E-202ENST00000558058 P0C880 135 aa5.87□□□□□ -1.47
PPP1R3E-202ENST00000558058 J3QL48 77 aa5.86□□□□□ -1.47
PPP1R3E-202ENST00000558058 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
PPP1R3E-202ENST00000558058 LRP2P98164 4655 aa5.83□□□□□ -1.48
PPP1R3E-202ENST00000558058 A8MUU9 505 aa5.8□□□□□ -1.48
PPP1R3E-202ENST00000558058 H0YAA0 97 aa5.8□□□□□ -1.48
PPP1R3E-202ENST00000558058 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
PPP1R3E-202ENST00000558058 IGKV2D-30A0A075B6S6 120 aa5.76□□□□□ -1.49
PPP1R3E-202ENST00000558058 RPS29P62273 56 aaKnown RBP5.74□□□□□ -1.49
PPP1R3E-202ENST00000558058 MUC2Q02817 5179 aa5.73□□□□□ -1.49
PPP1R3E-202ENST00000558058 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
PPP1R3E-202ENST00000558058 XP32Q5T750 250 aa5.64□□□□□ -1.51
PPP1R3E-202ENST00000558058 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
PPP1R3E-202ENST00000558058 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
PPP1R3E-202ENST00000558058 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
PPP1R3E-202ENST00000558058 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
PPP1R3E-202ENST00000558058 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
PPP1R3E-202ENST00000558058 A0A1B0GU33 70 aa5.58□□□□□ -1.52
PPP1R3E-202ENST00000558058 TPRXLQ17RH7 258 aa5.56□□□□□ -1.52
PPP1R3E-202ENST00000558058 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
PPP1R3E-202ENST00000558058 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
PPP1R3E-202ENST00000558058 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
PPP1R3E-202ENST00000558058 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
PPP1R3E-202ENST00000558058 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
PPP1R3E-202ENST00000558058 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
PPP1R3E-202ENST00000558058 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
PPP1R3E-202ENST00000558058 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
PPP1R3E-202ENST00000558058 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
PPP1R3E-202ENST00000558058 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
PPP1R3E-202ENST00000558058 A0A0D9SG42 100 aa5.41□□□□□ -1.54
PPP1R3E-202ENST00000558058 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
PPP1R3E-202ENST00000558058 K7ERS5 55 aa5.38□□□□□ -1.55
PPP1R3E-202ENST00000558058 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
PPP1R3E-202ENST00000558058 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
PPP1R3E-202ENST00000558058 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
PPP1R3E-202ENST00000558058 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
PPP1R3E-202ENST00000558058 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
PPP1R3E-202ENST00000558058 KRTAP3-3Q9BYR6 98 aa5.23□□□□□ -1.57
PPP1R3E-202ENST00000558058 S4R3F8 94 aa5.2□□□□□ -1.58
PPP1R3E-202ENST00000558058 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
PPP1R3E-202ENST00000558058 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
PPP1R3E-202ENST00000558058 M0R2T5 61 aa5.1□□□□□ -1.59
PPP1R3E-202ENST00000558058 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
PPP1R3E-202ENST00000558058 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
PPP1R3E-202ENST00000558058 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
PPP1R3E-202ENST00000558058 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
PPP1R3E-202ENST00000558058 MT1HP80294 61 aa4.97□□□□□ -1.61
PPP1R3E-202ENST00000558058 PLAC4Q8WY50 150 aa4.97□□□□□ -1.61
PPP1R3E-202ENST00000558058 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
PPP1R3E-202ENST00000558058 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
PPP1R3E-202ENST00000558058 M0QZ58 72 aa4.87□□□□□ -1.63
PPP1R3E-202ENST00000558058 R4GN34 69 aa4.86□□□□□ -1.63
PPP1R3E-202ENST00000558058 USH2AO75445 5202 aa4.86□□□□□ -1.63
PPP1R3E-202ENST00000558058 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
PPP1R3E-202ENST00000558058 MT1FP04733 61 aa4.78□□□□□ -1.64
PPP1R3E-202ENST00000558058 MT2AP02795 61 aa4.77□□□□□ -1.65
PPP1R3E-202ENST00000558058 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
PPP1R3E-202ENST00000558058 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
PPP1R3E-202ENST00000558058 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
PPP1R3E-202ENST00000558058 CAMK2N1Q7Z7J9 78 aa4.59□□□□□ -1.67
PPP1R3E-202ENST00000558058 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
PPP1R3E-202ENST00000558058 SPRR2GQ9BYE4 73 aa4.55□□□□□ -1.68
PPP1R3E-202ENST00000558058 LCE2BO14633 110 aa4.53□□□□□ -1.68
PPP1R3E-202ENST00000558058 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
PPP1R3E-202ENST00000558058 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
PPP1R3E-202ENST00000558058 KMT2DO14686 5537 aa4.47□□□□□ -1.69
PPP1R3E-202ENST00000558058 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
PPP1R3E-202ENST00000558058 MT1BP07438 61 aa4.47□□□□□ -1.69
PPP1R3E-202ENST00000558058 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
PPP1R3E-202ENST00000558058 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
PPP1R3E-202ENST00000558058 MT1XP80297 61 aa4.33□□□□□ -1.72
PPP1R3E-202ENST00000558058 TNP1P09430 55 aa4.31□□□□□ -1.72
PPP1R3E-202ENST00000558058 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
PPP1R3E-202ENST00000558058 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
PPP1R3E-202ENST00000558058 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
PPP1R3E-202ENST00000558058 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
PPP1R3E-202ENST00000558058 INE1O15225 51 aa4.21□□□□□ -1.74
PPP1R3E-202ENST00000558058 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
PPP1R3E-202ENST00000558058 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
PPP1R3E-202ENST00000558058 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
PPP1R3E-202ENST00000558058 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
PPP1R3E-202ENST00000558058 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
PPP1R3E-202ENST00000558058 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
PPP1R3E-202ENST00000558058 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
PPP1R3E-202ENST00000558058 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
PPP1R3E-202ENST00000558058 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
PPP1R3E-202ENST00000558058 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
PPP1R3E-202ENST00000558058 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
PPP1R3E-202ENST00000558058 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
PPP1R3E-202ENST00000558058 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
PPP1R3E-202ENST00000558058 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
PPP1R3E-202ENST00000558058 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms