RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
SPG11-204ENST00000557866 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
SPG11-204ENST00000557866 FP248Q71RG6 208 aaPredicted RBP3.99□□□□□ -1.77
SPG11-204ENST00000557866 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
SPG11-204ENST00000557866 MT3P25713 68 aa3.98□□□□□ -1.77
SPG11-204ENST00000557866 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
SPG11-204ENST00000557866 CYP4F30PQ9H0H9 118 aa3.97□□□□□ -1.77
SPG11-204ENST00000557866 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
SPG11-204ENST00000557866 PRR4Q16378 134 aa3.95□□□□□ -1.78
SPG11-204ENST00000557866 Q75L30 129 aa3.95□□□□□ -1.78
SPG11-204ENST00000557866 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
SPG11-204ENST00000557866 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
SPG11-204ENST00000557866 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
SPG11-204ENST00000557866 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
SPG11-204ENST00000557866 SERP1Q9Y6X1 66 aa3.92□□□□□ -1.78
SPG11-204ENST00000557866 HRES1P13985 223 aa3.91□□□□□ -1.78
SPG11-204ENST00000557866 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
SPG11-204ENST00000557866 LPAP08519 4548 aa3.9□□□□□ -1.78
SPG11-204ENST00000557866 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
SPG11-204ENST00000557866 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
SPG11-204ENST00000557866 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
SPG11-204ENST00000557866 SPINK7P58062 85 aa3.87□□□□□ -1.79
SPG11-204ENST00000557866 LRP2P98164 4655 aa3.87□□□□□ -1.79
SPG11-204ENST00000557866 ATP11AUNQ6ZP68 121 aa3.85□□□□□ -1.79
SPG11-204ENST00000557866 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
SPG11-204ENST00000557866 COA5Q86WW8 74 aa3.84□□□□□ -1.79
SPG11-204ENST00000557866 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
SPG11-204ENST00000557866 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
SPG11-204ENST00000557866 HERC1Q15751 4861 aa3.81□□□□□ -1.8
SPG11-204ENST00000557866 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
SPG11-204ENST00000557866 ACYP2P14621 99 aa3.8□□□□□ -1.8
SPG11-204ENST00000557866 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
SPG11-204ENST00000557866 A8MUN3 132 aa3.76□□□□□ -1.81
SPG11-204ENST00000557866 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
SPG11-204ENST00000557866 KRTAP4-1Q9BYQ7 146 aa3.75□□□□□ -1.81
SPG11-204ENST00000557866 Q1T7F1 81 aa3.74□□□□□ -1.81
SPG11-204ENST00000557866 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
SPG11-204ENST00000557866 CHKB-CPT1BH3BT56 60 aa3.73□□□□□ -1.81
SPG11-204ENST00000557866 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
SPG11-204ENST00000557866 LINC01558Q9Y6Z2 57 aa3.7□□□□□ -1.82
SPG11-204ENST00000557866 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
SPG11-204ENST00000557866 PSPHP1O15172 72 aa3.68□□□□□ -1.82
SPG11-204ENST00000557866 V9GYY9 64 aa3.68□□□□□ -1.82
SPG11-204ENST00000557866 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
SPG11-204ENST00000557866 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
SPG11-204ENST00000557866 Q5VV11 94 aa3.66□□□□□ -1.82
SPG11-204ENST00000557866 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
SPG11-204ENST00000557866 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
SPG11-204ENST00000557866 LCA10Q71F78 164 aa3.65□□□□□ -1.83
SPG11-204ENST00000557866 RBM12B-AS1Q9P1G2 102 aa3.65□□□□□ -1.83
SPG11-204ENST00000557866 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
SPG11-204ENST00000557866 S4R3F8 94 aa3.64□□□□□ -1.83
SPG11-204ENST00000557866 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
SPG11-204ENST00000557866 MUC2Q02817 5179 aa3.62□□□□□ -1.83
SPG11-204ENST00000557866 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
SPG11-204ENST00000557866 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
SPG11-204ENST00000557866 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
SPG11-204ENST00000557866 A0A1B0GU69 56 aa3.59□□□□□ -1.83
SPG11-204ENST00000557866 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
SPG11-204ENST00000557866 SVIPQ8NHG7 77 aa3.58□□□□□ -1.84
SPG11-204ENST00000557866 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
SPG11-204ENST00000557866 A8MU10 97 aa3.55□□□□□ -1.84
SPG11-204ENST00000557866 SEC61GP60059 68 aa3.54□□□□□ -1.84
SPG11-204ENST00000557866 A6NED7 52 aa3.53□□□□□ -1.84
SPG11-204ENST00000557866 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
SPG11-204ENST00000557866 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
SPG11-204ENST00000557866 P0C880 135 aa3.51□□□□□ -1.85
SPG11-204ENST00000557866 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
SPG11-204ENST00000557866 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
SPG11-204ENST00000557866 A0A1B0GU33 70 aa3.49□□□□□ -1.85
SPG11-204ENST00000557866 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
SPG11-204ENST00000557866 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
SPG11-204ENST00000557866 H0YAA0 97 aa3.48□□□□□ -1.85
SPG11-204ENST00000557866 UQCR11O14957 56 aa3.48□□□□□ -1.85
SPG11-204ENST00000557866 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
SPG11-204ENST00000557866 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
SPG11-204ENST00000557866 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
SPG11-204ENST00000557866 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
SPG11-204ENST00000557866 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
SPG11-204ENST00000557866 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
SPG11-204ENST00000557866 MT1HP80294 61 aa3.44□□□□□ -1.86
SPG11-204ENST00000557866 M0QZ58 72 aa3.37□□□□□ -1.87
SPG11-204ENST00000557866 A0A0D9SG42 100 aa3.36□□□□□ -1.87
SPG11-204ENST00000557866 A6NN06 94 aa3.35□□□□□ -1.87
SPG11-204ENST00000557866 M0R2T5 61 aa3.35□□□□□ -1.87
SPG11-204ENST00000557866 MT2AP02795 61 aa3.33□□□□□ -1.88
SPG11-204ENST00000557866 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
SPG11-204ENST00000557866 R4GN34 69 aa3.33□□□□□ -1.88
SPG11-204ENST00000557866 MT1FP04733 61 aa3.31□□□□□ -1.88
SPG11-204ENST00000557866 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
SPG11-204ENST00000557866 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
SPG11-204ENST00000557866 LINC01554Q52M75 96 aa3.29□□□□□ -1.88
SPG11-204ENST00000557866 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
SPG11-204ENST00000557866 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
SPG11-204ENST00000557866 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
SPG11-204ENST00000557866 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
SPG11-204ENST00000557866 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
SPG11-204ENST00000557866 K7ERS5 55 aa3.25□□□□□ -1.89
SPG11-204ENST00000557866 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
SPG11-204ENST00000557866 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms