RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 ROMO1P60602 79 aa5.98□□□□□ -1.45
CCDC85C-207ENST00000557769 FAT1Q14517 4588 aa5.97□□□□□ -1.45
CCDC85C-207ENST00000557769 PKHD1L1Q86WI1 4243 aa5.97□□□□□ -1.45
CCDC85C-207ENST00000557769 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
CCDC85C-207ENST00000557769 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
CCDC85C-207ENST00000557769 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
CCDC85C-207ENST00000557769 HERC2O95714 4834 aa5.93□□□□□ -1.46
CCDC85C-207ENST00000557769 COX6B2Q6YFQ2 88 aa5.92□□□□□ -1.46
CCDC85C-207ENST00000557769 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
CCDC85C-207ENST00000557769 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.46
CCDC85C-207ENST00000557769 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.48
CCDC85C-207ENST00000557769 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
CCDC85C-207ENST00000557769 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
CCDC85C-207ENST00000557769 PCLOQ9Y6V0 5065 aa5.79□□□□□ -1.48
CCDC85C-207ENST00000557769 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
CCDC85C-207ENST00000557769 S4R3F8 94 aa5.79□□□□□ -1.48
CCDC85C-207ENST00000557769 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
CCDC85C-207ENST00000557769 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
CCDC85C-207ENST00000557769 LRP1Q07954 4544 aaKnown RBP5.76□□□□□ -1.49
CCDC85C-207ENST00000557769 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
CCDC85C-207ENST00000557769 TNXBP22105 4242 aa5.76□□□□□ -1.49
CCDC85C-207ENST00000557769 P0C880 135 aa5.71□□□□□ -1.5
CCDC85C-207ENST00000557769 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.5
CCDC85C-207ENST00000557769 Q5VSD8 79 aa5.69□□□□□ -1.5
CCDC85C-207ENST00000557769 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
CCDC85C-207ENST00000557769 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
CCDC85C-207ENST00000557769 M0QZ58 72 aa5.62□□□□□ -1.51
CCDC85C-207ENST00000557769 R4GN34 69 aa5.59□□□□□ -1.51
CCDC85C-207ENST00000557769 KRTAP12-2P59991 146 aa5.57□□□□□ -1.52
CCDC85C-207ENST00000557769 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
CCDC85C-207ENST00000557769 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
CCDC85C-207ENST00000557769 HERC1Q15751 4861 aa5.55□□□□□ -1.52
CCDC85C-207ENST00000557769 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
CCDC85C-207ENST00000557769 KRTAP10-6P60371 365 aaPredicted RBP5.54□□□□□ -1.52
CCDC85C-207ENST00000557769 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
CCDC85C-207ENST00000557769 XP32Q5T750 250 aa5.49□□□□□ -1.53
CCDC85C-207ENST00000557769 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
CCDC85C-207ENST00000557769 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
CCDC85C-207ENST00000557769 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
CCDC85C-207ENST00000557769 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
CCDC85C-207ENST00000557769 LPAP08519 4548 aa5.4□□□□□ -1.55
CCDC85C-207ENST00000557769 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
CCDC85C-207ENST00000557769 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
CCDC85C-207ENST00000557769 J3QL48 77 aa5.32□□□□□ -1.56
CCDC85C-207ENST00000557769 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
CCDC85C-207ENST00000557769 LRP2P98164 4655 aa5.27□□□□□ -1.57
CCDC85C-207ENST00000557769 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
CCDC85C-207ENST00000557769 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.57
CCDC85C-207ENST00000557769 MUC2Q02817 5179 aa5.15□□□□□ -1.59
CCDC85C-207ENST00000557769 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
CCDC85C-207ENST00000557769 RNF213Q63HN8 5207 aa5.1□□□□□ -1.59
CCDC85C-207ENST00000557769 M0R2T5 61 aa5.1□□□□□ -1.59
CCDC85C-207ENST00000557769 TNP1P09430 55 aa5.06□□□□□ -1.6
CCDC85C-207ENST00000557769 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
CCDC85C-207ENST00000557769 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
CCDC85C-207ENST00000557769 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
CCDC85C-207ENST00000557769 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
CCDC85C-207ENST00000557769 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
CCDC85C-207ENST00000557769 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
CCDC85C-207ENST00000557769 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
CCDC85C-207ENST00000557769 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
CCDC85C-207ENST00000557769 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
CCDC85C-207ENST00000557769 MT1HP80294 61 aa4.68□□□□□ -1.66
CCDC85C-207ENST00000557769 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
CCDC85C-207ENST00000557769 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
CCDC85C-207ENST00000557769 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
CCDC85C-207ENST00000557769 MT2AP02795 61 aa4.42□□□□□ -1.7
CCDC85C-207ENST00000557769 MT1FP04733 61 aa4.4□□□□□ -1.7
CCDC85C-207ENST00000557769 KRTAP12-3P60328 96 aa4.4□□□□□ -1.7
CCDC85C-207ENST00000557769 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
CCDC85C-207ENST00000557769 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
CCDC85C-207ENST00000557769 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
CCDC85C-207ENST00000557769 INE1O15225 51 aa4.33□□□□□ -1.72
CCDC85C-207ENST00000557769 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
CCDC85C-207ENST00000557769 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
CCDC85C-207ENST00000557769 USH2AO75445 5202 aa4.3□□□□□ -1.72
CCDC85C-207ENST00000557769 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
CCDC85C-207ENST00000557769 LCE2BO14633 110 aa4.27□□□□□ -1.73
CCDC85C-207ENST00000557769 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
CCDC85C-207ENST00000557769 SSPOA2VEC9 5147 aa4.21□□□□□ -1.73
CCDC85C-207ENST00000557769 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
CCDC85C-207ENST00000557769 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
CCDC85C-207ENST00000557769 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
CCDC85C-207ENST00000557769 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
CCDC85C-207ENST00000557769 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
CCDC85C-207ENST00000557769 MT1BP07438 61 aa4.13□□□□□ -1.75
CCDC85C-207ENST00000557769 MT1XP80297 61 aa4.11□□□□□ -1.75
CCDC85C-207ENST00000557769 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CCDC85C-207ENST00000557769 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
CCDC85C-207ENST00000557769 KMT2DO14686 5537 aa4.07□□□□□ -1.76
CCDC85C-207ENST00000557769 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
CCDC85C-207ENST00000557769 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
CCDC85C-207ENST00000557769 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
CCDC85C-207ENST00000557769 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
CCDC85C-207ENST00000557769 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
CCDC85C-207ENST00000557769 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
CCDC85C-207ENST00000557769 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CCDC85C-207ENST00000557769 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
CCDC85C-207ENST00000557769 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
CCDC85C-207ENST00000557769 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms