RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 ITPR2Q14571 2701 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 AGLP35573 1532 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 FANCD2Q9BXW9 1451 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 PREX2Q70Z35 1606 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 ABCA5Q8WWZ7 1642 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 RANBP2P49792 3224 aaKnown RBP-0.08□□□□□ -2.42
GPHN-216ENST00000557678 LINC01546A6NGU7 62 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 TFF3Q07654 80 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 CHD7Q9P2D1 2997 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 ADGRG4Q8IZF6 3080 aa-0.08□□□□□ -2.42
GPHN-216ENST00000557678 KIF21BO75037 1637 aa-0.09□□□□□ -2.42
GPHN-216ENST00000557678 DNAH3Q8TD57 4116 aa-0.09□□□□□ -2.42
GPHN-216ENST00000557678 NIPBLQ6KC79 2804 aaeCLIP-0.09□□□□□ -2.42
GPHN-216ENST00000557678 LAMA5O15230 3695 aa-0.1□□□□□ -2.42
GPHN-216ENST00000557678 MUC2Q02817 5179 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 LMO7Q8WWI1 1683 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 FAM208AQ9UK61 1670 aaKnown RBP-0.1□□□□□ -2.43
GPHN-216ENST00000557678 TRIOO75962 3097 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 MT1HP80294 61 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 DNAH1Q9P2D7 4330 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 VPS13BQ7Z7G8 4022 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 CELSR3Q9NYQ7 3312 aa-0.1□□□□□ -2.43
GPHN-216ENST00000557678 TRPM2O94759 1503 aa-0.11□□□□□ -2.43
GPHN-216ENST00000557678 NDUFA1O15239 70 aa-0.11□□□□□ -2.43
GPHN-216ENST00000557678 POLR2KP53803 58 aaKnown RBP-0.11□□□□□ -2.43
GPHN-216ENST00000557678 KRTAP8-1Q8IUC2 63 aa-0.11□□□□□ -2.43
GPHN-216ENST00000557678 CUBNO60494 3623 aa-0.11□□□□□ -2.43
GPHN-216ENST00000557678 ANK3Q12955 4377 aaKnown RBP-0.12□□□□□ -2.43
GPHN-216ENST00000557678 PKHD1L1Q86WI1 4243 aa-0.12□□□□□ -2.43
GPHN-216ENST00000557678 CRYBG3Q68DQ2 2970 aa-0.12□□□□□ -2.43
GPHN-216ENST00000557678 MT4P47944 62 aa-0.13□□□□□ -2.43
GPHN-216ENST00000557678 KRTAP19-5Q3LI72 72 aa-0.13□□□□□ -2.43
GPHN-216ENST00000557678 TOMM5Q8N4H5 51 aa-0.13□□□□□ -2.43
GPHN-216ENST00000557678 DDX60Q8IY21 1712 aaKnown RBP-0.13□□□□□ -2.43
GPHN-216ENST00000557678 FAT3Q8TDW7 4589 aa-0.13□□□□□ -2.43
GPHN-216ENST00000557678 MGAQ8IWI9 3026 aa-0.13□□□□□ -2.43
GPHN-216ENST00000557678 SACSQ9NZJ4 4579 aa-0.14□□□□□ -2.43
GPHN-216ENST00000557678 MROH2AA6NES4 1674 aa-0.14□□□□□ -2.43
GPHN-216ENST00000557678 SMR3BP02814 79 aaPredicted RBP-0.14□□□□□ -2.43
GPHN-216ENST00000557678 DNAH8Q96JB1 4490 aa-0.14□□□□□ -2.43
GPHN-216ENST00000557678 VPS13DQ5THJ4 4388 aa-0.14□□□□□ -2.43
GPHN-216ENST00000557678 HERC1Q15751 4861 aa-0.14□□□□□ -2.43
GPHN-216ENST00000557678 FAT1Q14517 4588 aa-0.14□□□□□ -2.43
GPHN-216ENST00000557678 DNAH11Q96DT5 4516 aa-0.15□□□□□ -2.43
GPHN-216ENST00000557678 NRXN3Q9Y4C0 1643 aa-0.15□□□□□ -2.43
GPHN-216ENST00000557678 DNAH2Q9P225 4427 aa-0.15□□□□□ -2.43
GPHN-216ENST00000557678 KRTAP20-2Q3LI61 65 aa-0.15□□□□□ -2.43
GPHN-216ENST00000557678 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
GPHN-216ENST00000557678 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.16□□□□□ -2.43
GPHN-216ENST00000557678 CLTCL1P53675 1640 aa-0.16□□□□□ -2.43
GPHN-216ENST00000557678 KMT2CQ8NEZ4 4911 aaKnown RBP-0.16□□□□□ -2.44
GPHN-216ENST00000557678 TLN1Q9Y490 2541 aaKnown RBP-0.16□□□□□ -2.44
GPHN-216ENST00000557678 CFAP54Q96N23 3096 aa-0.16□□□□□ -2.44
GPHN-216ENST00000557678 LAMA3Q16787 3333 aa-0.16□□□□□ -2.44
GPHN-216ENST00000557678 MUC17Q685J3 4493 aa-0.17□□□□□ -2.44
GPHN-216ENST00000557678 APOBP04114 4563 aaKnown RBP-0.17□□□□□ -2.44
GPHN-216ENST00000557678 NEBP20929 6669 aa-0.17□□□□□ -2.44
GPHN-216ENST00000557678 SRCAPQ6ZRS2 3230 aa-0.18□□□□□ -2.44
GPHN-216ENST00000557678 MT1EP04732 61 aa-0.18□□□□□ -2.44
GPHN-216ENST00000557678 LEAP2Q969E1 77 aa-0.18□□□□□ -2.44
GPHN-216ENST00000557678 PRUNE2Q8WUY3 3088 aa-0.18□□□□□ -2.44
GPHN-216ENST00000557678 IQGAP1P46940 1657 aa-0.18□□□□□ -2.44
GPHN-216ENST00000557678 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
GPHN-216ENST00000557678 NFAT5O94916 1531 aa-0.18□□□□□ -2.44
GPHN-216ENST00000557678 DMXL2Q8TDJ6 3036 aa-0.19□□□□□ -2.44
GPHN-216ENST00000557678 IQGAP2Q13576 1575 aa-0.19□□□□□ -2.44
GPHN-216ENST00000557678 ATMQ13315 3056 aa-0.19□□□□□ -2.44
GPHN-216ENST00000557678 CEP250Q9BV73 2442 aa-0.19□□□□□ -2.44
GPHN-216ENST00000557678 MT1XP80297 61 aa-0.19□□□□□ -2.44
GPHN-216ENST00000557678 UBR4Q5T4S7 5183 aa-0.19□□□□□ -2.44
GPHN-216ENST00000557678 DEFB136Q30KP8 78 aa-0.2□□□□□ -2.44
GPHN-216ENST00000557678 MT1LQ93083 61 aa-0.2□□□□□ -2.44
GPHN-216ENST00000557678 TOMM7Q9P0U1 55 aa-0.2□□□□□ -2.44
GPHN-216ENST00000557678 USH2AO75445 5202 aa-0.2□□□□□ -2.44
GPHN-216ENST00000557678 RELNP78509 3460 aa-0.2□□□□□ -2.44
GPHN-216ENST00000557678 CMYA5Q8N3K9 4069 aa-0.2□□□□□ -2.44
GPHN-216ENST00000557678 LINC01590Q5TEZ4 76 aa-0.21□□□□□ -2.44
GPHN-216ENST00000557678 TRRAPQ9Y4A5 3859 aa-0.21□□□□□ -2.44
GPHN-216ENST00000557678 FRYLO94915 3013 aa-0.22□□□□□ -2.44
GPHN-216ENST00000557678 MT1HL1P0DM35 61 aa-0.22□□□□□ -2.44
GPHN-216ENST00000557678 CENPEQ02224 2701 aa-0.22□□□□□ -2.45
GPHN-216ENST00000557678 CSMD1Q96PZ7 3565 aa-0.23□□□□□ -2.45
GPHN-216ENST00000557678 SPTBN5Q9NRC6 3674 aaKnown RBP-0.23□□□□□ -2.45
GPHN-216ENST00000557678 SPENQ96T58 3664 aaKnown RBP-0.23□□□□□ -2.45
GPHN-216ENST00000557678 HERC2O95714 4834 aa-0.23□□□□□ -2.45
GPHN-216ENST00000557678 SAMD9LQ8IVG5 1584 aa-0.23□□□□□ -2.45
GPHN-216ENST00000557678 PLECQ15149 4684 aaKnown RBP-0.24□□□□□ -2.45
GPHN-216ENST00000557678 DNAH7Q8WXX0 4024 aa-0.24□□□□□ -2.45
GPHN-216ENST00000557678 ATP7AQ04656 1500 aa-0.24□□□□□ -2.45
GPHN-216ENST00000557678 EYSQ5T1H1 3165 aa-0.24□□□□□ -2.45
GPHN-216ENST00000557678 EPPK1P58107 5090 aaKnown RBP-0.25□□□□□ -2.45
GPHN-216ENST00000557678 DEFB4AO15263 64 aa-0.25□□□□□ -2.45
GPHN-216ENST00000557678 RPL39P62891 51 aaKnown RBP-0.25□□□□□ -2.45
GPHN-216ENST00000557678 RHPN1-AS1Q9BWJ2 59 aa-0.25□□□□□ -2.45
GPHN-216ENST00000557678 DNAH17Q9UFH2 4485 aa-0.25□□□□□ -2.45
GPHN-216ENST00000557678 RYR1P21817 5038 aa-0.27□□□□□ -2.45
GPHN-216ENST00000557678 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
GPHN-216ENST00000557678 FREM2Q5SZK8 3169 aa-0.28□□□□□ -2.45
GPHN-216ENST00000557678 MT2AP02795 61 aa-0.28□□□□□ -2.45
GPHN-216ENST00000557678 RPS29P62273 56 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms