RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
SPTLC2-206ENST00000557566 LINC00472Q9H8W2 130 aa3.92□□□□□ -1.78
SPTLC2-206ENST00000557566 A0A087WSZ3 146 aa3.91□□□□□ -1.78
SPTLC2-206ENST00000557566 WFDC13Q8IUB5 93 aa3.91□□□□□ -1.78
SPTLC2-206ENST00000557566 FAM168BA1KXE4 195 aa3.9□□□□□ -1.79
SPTLC2-206ENST00000557566 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
SPTLC2-206ENST00000557566 TYMSOSQ8TAI1 123 aa3.9□□□□□ -1.79
SPTLC2-206ENST00000557566 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
SPTLC2-206ENST00000557566 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
SPTLC2-206ENST00000557566 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
SPTLC2-206ENST00000557566 MT1HP80294 61 aa3.89□□□□□ -1.79
SPTLC2-206ENST00000557566 MOBPQ13875 183 aa3.89□□□□□ -1.79
SPTLC2-206ENST00000557566 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
SPTLC2-206ENST00000557566 A0A087X002 238 aa3.88□□□□□ -1.79
SPTLC2-206ENST00000557566 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
SPTLC2-206ENST00000557566 COA5Q86WW8 74 aa3.88□□□□□ -1.79
SPTLC2-206ENST00000557566 KRTAP11-1Q8IUC1 163 aa3.88□□□□□ -1.79
SPTLC2-206ENST00000557566 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
SPTLC2-206ENST00000557566 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
SPTLC2-206ENST00000557566 A6NN06 94 aa3.87□□□□□ -1.79
SPTLC2-206ENST00000557566 ZNF861PO60384 105 aa3.86□□□□□ -1.79
SPTLC2-206ENST00000557566 LCA10Q71F78 164 aa3.86□□□□□ -1.79
SPTLC2-206ENST00000557566 LINC00304Q8N9R0 145 aa3.86□□□□□ -1.79
SPTLC2-206ENST00000557566 USH2AO75445 5202 aa3.85□□□□□ -1.79
SPTLC2-206ENST00000557566 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
SPTLC2-206ENST00000557566 A6NED7 52 aa3.84□□□□□ -1.79
SPTLC2-206ENST00000557566 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
SPTLC2-206ENST00000557566 PRLHP81277 87 aa3.83□□□□□ -1.8
SPTLC2-206ENST00000557566 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
SPTLC2-206ENST00000557566 C7orf65Q6ZTY9 151 aa3.83□□□□□ -1.8
SPTLC2-206ENST00000557566 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
SPTLC2-206ENST00000557566 M0R2T5 61 aa3.82□□□□□ -1.8
SPTLC2-206ENST00000557566 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
SPTLC2-206ENST00000557566 KRTAP13-3Q3SY46 172 aa3.82□□□□□ -1.8
SPTLC2-206ENST00000557566 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
SPTLC2-206ENST00000557566 RBM12B-AS1Q9P1G2 102 aa3.82□□□□□ -1.8
SPTLC2-206ENST00000557566 KRTAP13-2Q52LG2 175 aa3.81□□□□□ -1.8
SPTLC2-206ENST00000557566 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
SPTLC2-206ENST00000557566 Q96NJ1 140 aa3.81□□□□□ -1.8
SPTLC2-206ENST00000557566 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
SPTLC2-206ENST00000557566 A8MU10 97 aa3.8□□□□□ -1.8
SPTLC2-206ENST00000557566 LINC00483Q53H64 154 aa3.8□□□□□ -1.8
SPTLC2-206ENST00000557566 A0A1B0GVX0 72 aa3.79□□□□□ -1.8
SPTLC2-206ENST00000557566 HRES1P13985 223 aa3.79□□□□□ -1.8
SPTLC2-206ENST00000557566 SPTSSBQ8NFR3 76 aa3.79□□□□□ -1.8
SPTLC2-206ENST00000557566 ANAPC11Q9NYG5 84 aa3.79□□□□□ -1.8
SPTLC2-206ENST00000557566 ZNF706Q9Y5V0 76 aaPredicted RBP3.79□□□□□ -1.8
SPTLC2-206ENST00000557566 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
SPTLC2-206ENST00000557566 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
SPTLC2-206ENST00000557566 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
SPTLC2-206ENST00000557566 SPAG11AQ6PDA7 123 aa3.76□□□□□ -1.81
SPTLC2-206ENST00000557566 ACYP2P14621 99 aa3.75□□□□□ -1.81
SPTLC2-206ENST00000557566 PCOTHQ58A44 107 aa3.75□□□□□ -1.81
SPTLC2-206ENST00000557566 C8orf87E5RJ46 101 aa3.74□□□□□ -1.81
SPTLC2-206ENST00000557566 SPINK7P58062 85 aa3.73□□□□□ -1.81
SPTLC2-206ENST00000557566 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
SPTLC2-206ENST00000557566 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
SPTLC2-206ENST00000557566 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
SPTLC2-206ENST00000557566 MT3P25713 68 aa3.71□□□□□ -1.82
SPTLC2-206ENST00000557566 COX6B2Q6YFQ2 88 aa3.71□□□□□ -1.82
SPTLC2-206ENST00000557566 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
SPTLC2-206ENST00000557566 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
SPTLC2-206ENST00000557566 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
SPTLC2-206ENST00000557566 SSBP3-AS1Q7Z2R9 100 aa3.67□□□□□ -1.82
SPTLC2-206ENST00000557566 UQCR11O14957 56 aa3.66□□□□□ -1.82
SPTLC2-206ENST00000557566 SPINK1P00995 79 aa3.66□□□□□ -1.82
SPTLC2-206ENST00000557566 LINC00313P59037 77 aa3.66□□□□□ -1.82
SPTLC2-206ENST00000557566 A0A1B0GU69 56 aa3.65□□□□□ -1.83
SPTLC2-206ENST00000557566 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
SPTLC2-206ENST00000557566 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SPTLC2-206ENST00000557566 Q5W150 140 aa3.65□□□□□ -1.83
SPTLC2-206ENST00000557566 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
SPTLC2-206ENST00000557566 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
SPTLC2-206ENST00000557566 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
SPTLC2-206ENST00000557566 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
SPTLC2-206ENST00000557566 NEBP20929 6669 aa3.62□□□□□ -1.83
SPTLC2-206ENST00000557566 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
SPTLC2-206ENST00000557566 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
SPTLC2-206ENST00000557566 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SPTLC2-206ENST00000557566 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
SPTLC2-206ENST00000557566 C9orf92A6NGG3 77 aa3.56□□□□□ -1.84
SPTLC2-206ENST00000557566 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
SPTLC2-206ENST00000557566 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
SPTLC2-206ENST00000557566 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
SPTLC2-206ENST00000557566 ADM2Q7Z4H4 148 aa3.53□□□□□ -1.84
SPTLC2-206ENST00000557566 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
SPTLC2-206ENST00000557566 MT2AP02795 61 aa3.51□□□□□ -1.85
SPTLC2-206ENST00000557566 RPL37P61927 97 aaKnown RBP3.5□□□□□ -1.85
SPTLC2-206ENST00000557566 A8MUU9 505 aa3.49□□□□□ -1.85
SPTLC2-206ENST00000557566 CSAG1Q6PB30 78 aa3.49□□□□□ -1.85
SPTLC2-206ENST00000557566 MT1FP04733 61 aa3.48□□□□□ -1.85
SPTLC2-206ENST00000557566 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
SPTLC2-206ENST00000557566 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
SPTLC2-206ENST00000557566 H0YAA0 97 aa3.43□□□□□ -1.86
SPTLC2-206ENST00000557566 A0A1B0GU33 70 aa3.42□□□□□ -1.86
SPTLC2-206ENST00000557566 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
SPTLC2-206ENST00000557566 K7ERS5 55 aa3.41□□□□□ -1.86
SPTLC2-206ENST00000557566 MDN1Q9NU22 5596 aa3.4□□□□□ -1.86
SPTLC2-206ENST00000557566 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.87
SPTLC2-206ENST00000557566 ROMO1P60602 79 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms