RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
HIF1A-212ENST00000557538 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
HIF1A-212ENST00000557538 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
HIF1A-212ENST00000557538 HERC1Q15751 4861 aa0.61□□□□□ -2.31
HIF1A-212ENST00000557538 STATHP02808 62 aa0.61□□□□□ -2.31
HIF1A-212ENST00000557538 EPPK1P58107 5090 aaKnown RBP0.6□□□□□ -2.31
HIF1A-212ENST00000557538 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 RTTNQ86VV8 2226 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 SSPOA2VEC9 5147 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 MUC6Q6W4X9 2439 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 MTORP42345 2549 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-212ENST00000557538 IGF2RP11717 2491 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 EYSQ5T1H1 3165 aa0.6□□□□□ -2.31
HIF1A-212ENST00000557538 APCP25054 2843 aa0.59□□□□□ -2.31
HIF1A-212ENST00000557538 H0YGG7 62 aa0.59□□□□□ -2.31
HIF1A-212ENST00000557538 S4R3F8 94 aa0.59□□□□□ -2.31
HIF1A-212ENST00000557538 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.31
HIF1A-212ENST00000557538 TLN1Q9Y490 2541 aaKnown RBP0.59□□□□□ -2.31
HIF1A-212ENST00000557538 COL7A1Q02388 2944 aa0.59□□□□□ -2.32
HIF1A-212ENST00000557538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.328e-7■■■■□ 25
HIF1A-212ENST00000557538 UBR5O95071 2799 aaPredicted RBP0.59□□□□□ -2.32
HIF1A-212ENST00000557538 SORL1Q92673 2214 aa0.59□□□□□ -2.32
HIF1A-212ENST00000557538 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.32
HIF1A-212ENST00000557538 DNHD1Q96M86 4753 aa0.59□□□□□ -2.32
HIF1A-212ENST00000557538 MGAM2Q2M2H8 2515 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 DEFB1P60022 68 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 SPINK13Q1W4C9 94 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 Q5VSD8 79 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 LPAP08519 4548 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 TACC2O95359 2948 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 MAP1AP78559 2803 aaPredicted RBP0.58□□□□□ -2.32
HIF1A-212ENST00000557538 NIPBLQ6KC79 2804 aaeCLIP0.58□□□□□ -2.32
HIF1A-212ENST00000557538 BIRC6Q9NR09 4857 aa0.58□□□□□ -2.32
HIF1A-212ENST00000557538 MUC19Q7Z5P9 8384 aa0.57□□□□□ -2.32
HIF1A-212ENST00000557538 FLG2Q5D862 2391 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-212ENST00000557538 URB1O60287 2271 aaKnown RBP0.57□□□□□ -2.32
HIF1A-212ENST00000557538 UBE2DNLQ8IWF7 75 aa0.57□□□□□ -2.32
HIF1A-212ENST00000557538 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
HIF1A-212ENST00000557538 SRRM2Q9UQ35 2752 aaKnown RBP0.57□□□□□ -2.32
HIF1A-212ENST00000557538 SPTA1P02549 2419 aa0.57□□□□□ -2.32
HIF1A-212ENST00000557538 FAT4Q6V0I7 4981 aa0.57□□□□□ -2.32
HIF1A-212ENST00000557538 FSIP2Q5CZC0 6907 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 DMBT1Q9UGM3 2413 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-212ENST00000557538 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 COL6A6A6NMZ7 2263 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 DOPEY2Q9Y3R5 2298 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 TOMM7Q9P0U1 55 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 ZNF292O60281 2723 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 TLN2Q9Y4G6 2542 aa0.56□□□□□ -2.32
HIF1A-212ENST00000557538 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 APELAP0DMC3 54 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 FLNCQ14315 2725 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 STAB2Q8WWQ8 2551 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 ABCA13Q86UQ4 5058 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 MXRA5Q9NR99 2828 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 ASCC3Q8N3C0 2202 aaKnown RBP0.55□□□□□ -2.32
HIF1A-212ENST00000557538 ZANQ9Y493 2812 aa0.55□□□□□ -2.32
HIF1A-212ENST00000557538 DYNC1H1Q14204 4646 aaKnown RBP0.54□□□□□ -2.32
HIF1A-212ENST00000557538 FAT1Q14517 4588 aa0.54□□□□□ -2.32
HIF1A-212ENST00000557538 NBEAL1Q6ZS30 2694 aa0.54□□□□□ -2.32
HIF1A-212ENST00000557538 KRTAP5-10Q6L8G5 202 aa0.54□□□□□ -2.32
HIF1A-212ENST00000557538 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
HIF1A-212ENST00000557538 UTP20O75691 2785 aaKnown RBP0.54□□□□□ -2.32
HIF1A-212ENST00000557538 ABCA1O95477 2261 aa0.54□□□□□ -2.32
HIF1A-212ENST00000557538 H3BUA1 57 aa0.54□□□□□ -2.32
HIF1A-212ENST00000557538 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
HIF1A-212ENST00000557538 KMT2DO14686 5537 aa0.53□□□□□ -2.32
HIF1A-212ENST00000557538 ICE1Q9Y2F5 2266 aa0.53□□□□□ -2.32
HIF1A-212ENST00000557538 WNK1Q9H4A3 2382 aa0.53□□□□□ -2.32
HIF1A-212ENST00000557538 PTPRZ1P23471 2315 aaPredicted RBP0.53□□□□□ -2.32
HIF1A-212ENST00000557538 MUC17Q685J3 4493 aa0.53□□□□□ -2.32
HIF1A-212ENST00000557538 NBASA2RRP1 2371 aa0.53□□□□□ -2.33
HIF1A-212ENST00000557538 PRLHP81277 87 aa0.52□□□□□ -2.33
HIF1A-212ENST00000557538 FCGBPQ9Y6R7 5405 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-212ENST00000557538 AHCTF1Q8WYP5 2266 aa0.52□□□□□ -2.33
HIF1A-212ENST00000557538 RHPN1-AS1Q9BWJ2 59 aa0.52□□□□□ -2.33
HIF1A-212ENST00000557538 DEFB110Q30KQ9 67 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 TENM1Q9UKZ4 2725 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 ITPR1Q14643 2758 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 APLNQ9ULZ1 77 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 KRTAP10-4P60372 401 aaPredicted RBP0.51□□□□□ -2.33
HIF1A-212ENST00000557538 HERC2O95714 4834 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
HIF1A-212ENST00000557538 A0A0D9SG42 100 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 H3BUX3 64 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 CACNA1EQ15878 2313 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 HIVEP1P15822 2718 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 PLCE1Q9P212 2302 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
HIF1A-212ENST00000557538 PRO0255Q9UI72 69 aa0.49□□□□□ -2.33
HIF1A-212ENST00000557538 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
HIF1A-212ENST00000557538 SPTBN1Q01082 2364 aaKnown RBP0.48□□□□□ -2.33
HIF1A-212ENST00000557538 M0QZ58 72 aa0.48□□□□□ -2.33
HIF1A-212ENST00000557538 TENM3Q9P273 2699 aa0.48□□□□□ -2.33
HIF1A-212ENST00000557538 SPINK1P00995 79 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms