RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ATOX1O00244 68 aa5.12□□□□□ -1.59
HNRNPC-232ENST00000557442 MT2AP02795 61 aa5.11□□□□□ -1.59
HNRNPC-232ENST00000557442 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
HNRNPC-232ENST00000557442 OCR1Q9BZK8 76 aa5.1□□□□□ -1.59
HNRNPC-232ENST00000557442 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.59
HNRNPC-232ENST00000557442 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
HNRNPC-232ENST00000557442 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
HNRNPC-232ENST00000557442 MT1FP04733 61 aa5.07□□□□□ -1.6
HNRNPC-232ENST00000557442 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
HNRNPC-232ENST00000557442 MP68P56378 58 aa5.06□□□□□ -1.6
HNRNPC-232ENST00000557442 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
HNRNPC-232ENST00000557442 LINC00208Q96KT6 92 aa5.06□□□□□ -1.6
HNRNPC-232ENST00000557442 S4R3F8 94 aa5.06□□□□□ -1.6
HNRNPC-232ENST00000557442 IMUPQ9GZP8 106 aa5.05□□□□□ -1.6
HNRNPC-232ENST00000557442 C5orf47Q569G3 176 aa5.03□□□□□ -1.6
HNRNPC-232ENST00000557442 LCA10Q71F78 164 aa5.01□□□□□ -1.61
HNRNPC-232ENST00000557442 FAM236AA0A1B0GUQ0 79 aa5□□□□□ -1.61
HNRNPC-232ENST00000557442 FAM236BA0A1B0GV22 79 aa5□□□□□ -1.61
HNRNPC-232ENST00000557442 KLKP1Q107X0 134 aa5□□□□□ -1.61
HNRNPC-232ENST00000557442 H3BPC8 53 aa4.99□□□□□ -1.61
HNRNPC-232ENST00000557442 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
HNRNPC-232ENST00000557442 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
HNRNPC-232ENST00000557442 SMIM20Q8N5G0 67 aa4.96□□□□□ -1.62
HNRNPC-232ENST00000557442 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
HNRNPC-232ENST00000557442 A8MUN3 132 aa4.95□□□□□ -1.62
HNRNPC-232ENST00000557442 USH2AO75445 5202 aa4.9□□□□□ -1.63
HNRNPC-232ENST00000557442 NDUFC1O43677 76 aa4.9□□□□□ -1.63
HNRNPC-232ENST00000557442 DMAC1Q96GE9 116 aa4.87□□□□□ -1.63
HNRNPC-232ENST00000557442 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
HNRNPC-232ENST00000557442 SNURFQ9Y675 71 aa4.84□□□□□ -1.63
HNRNPC-232ENST00000557442 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
HNRNPC-232ENST00000557442 C20orf197Q8N268 126 aa4.81□□□□□ -1.64
HNRNPC-232ENST00000557442 H0YAA0 97 aa4.79□□□□□ -1.64
HNRNPC-232ENST00000557442 ACYP2P14621 99 aa4.77□□□□□ -1.65
HNRNPC-232ENST00000557442 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
HNRNPC-232ENST00000557442 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
HNRNPC-232ENST00000557442 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
HNRNPC-232ENST00000557442 COX7CP15954 63 aa4.73□□□□□ -1.65
HNRNPC-232ENST00000557442 SPANXA2-OT1Q8N9U9 137 aa4.73□□□□□ -1.65
HNRNPC-232ENST00000557442 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
HNRNPC-232ENST00000557442 CHKB-CPT1BH3BT56 60 aa4.72□□□□□ -1.65
HNRNPC-232ENST00000557442 Q5VV11 94 aa4.72□□□□□ -1.65
HNRNPC-232ENST00000557442 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
HNRNPC-232ENST00000557442 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
HNRNPC-232ENST00000557442 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
HNRNPC-232ENST00000557442 MT1BP07438 61 aa4.69□□□□□ -1.66
HNRNPC-232ENST00000557442 P0C880 135 aa4.68□□□□□ -1.66
HNRNPC-232ENST00000557442 ANAPC13Q9BS18 74 aa4.68□□□□□ -1.66
HNRNPC-232ENST00000557442 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
HNRNPC-232ENST00000557442 R4GN34 69 aa4.64□□□□□ -1.67
HNRNPC-232ENST00000557442 H3BS24 57 aa4.63□□□□□ -1.67
HNRNPC-232ENST00000557442 H7BZZ5 65 aa4.63□□□□□ -1.67
HNRNPC-232ENST00000557442 M0QZ58 72 aa4.62□□□□□ -1.67
HNRNPC-232ENST00000557442 COA5Q86WW8 74 aa4.61□□□□□ -1.67
HNRNPC-232ENST00000557442 A6NN06 94 aa4.6□□□□□ -1.67
HNRNPC-232ENST00000557442 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
HNRNPC-232ENST00000557442 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
HNRNPC-232ENST00000557442 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
HNRNPC-232ENST00000557442 LINC01554Q52M75 96 aa4.55□□□□□ -1.68
HNRNPC-232ENST00000557442 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
HNRNPC-232ENST00000557442 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
HNRNPC-232ENST00000557442 SEC61GP60059 68 aa4.47□□□□□ -1.69
HNRNPC-232ENST00000557442 ATP5EP56381 51 aaPredicted RBP4.46□□□□□ -1.69
HNRNPC-232ENST00000557442 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.69
HNRNPC-232ENST00000557442 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
HNRNPC-232ENST00000557442 MT1XP80297 61 aa4.45□□□□□ -1.7
HNRNPC-232ENST00000557442 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
HNRNPC-232ENST00000557442 TMEM258P61165 79 aa4.41□□□□□ -1.7
HNRNPC-232ENST00000557442 A0A1B0GU69 56 aa4.38□□□□□ -1.71
HNRNPC-232ENST00000557442 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
HNRNPC-232ENST00000557442 A0A1B0GU33 70 aa4.37□□□□□ -1.71
HNRNPC-232ENST00000557442 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
HNRNPC-232ENST00000557442 A0A0D9SG42 100 aa4.33□□□□□ -1.72
HNRNPC-232ENST00000557442 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
HNRNPC-232ENST00000557442 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
HNRNPC-232ENST00000557442 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
HNRNPC-232ENST00000557442 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
HNRNPC-232ENST00000557442 KMT2DO14686 5537 aa4.25□□□□□ -1.73
HNRNPC-232ENST00000557442 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
HNRNPC-232ENST00000557442 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
HNRNPC-232ENST00000557442 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
HNRNPC-232ENST00000557442 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
HNRNPC-232ENST00000557442 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
HNRNPC-232ENST00000557442 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
HNRNPC-232ENST00000557442 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
HNRNPC-232ENST00000557442 A8MU10 97 aa4.21□□□□□ -1.73
HNRNPC-232ENST00000557442 KRTAP10-12P60413 245 aa4.21□□□□□ -1.73
HNRNPC-232ENST00000557442 NEBP20929 6669 aa4.2□□□□□ -1.74
HNRNPC-232ENST00000557442 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
HNRNPC-232ENST00000557442 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
HNRNPC-232ENST00000557442 PCP4P48539 62 aa4.16□□□□□ -1.74
HNRNPC-232ENST00000557442 UQCR11O14957 56 aa4.15□□□□□ -1.75
HNRNPC-232ENST00000557442 V9GYY9 64 aa4.13□□□□□ -1.75
HNRNPC-232ENST00000557442 PSPHP1O15172 72 aa4.1□□□□□ -1.75
HNRNPC-232ENST00000557442 Q1T7F1 81 aa4.1□□□□□ -1.75
HNRNPC-232ENST00000557442 SPRR2EP22531 72 aa4.09□□□□□ -1.75
HNRNPC-232ENST00000557442 SPRR2BP35325 72 aa4.09□□□□□ -1.75
HNRNPC-232ENST00000557442 SPRR2AP35326 72 aa4.09□□□□□ -1.75
HNRNPC-232ENST00000557442 MDN1Q9NU22 5596 aa4.09□□□□□ -1.76
HNRNPC-232ENST00000557442 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms