RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
SHMT2-230ENST00000557427 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
SHMT2-230ENST00000557427 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
SHMT2-230ENST00000557427 A8MUU9 505 aa6.56□□□□□ -1.36
SHMT2-230ENST00000557427 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
SHMT2-230ENST00000557427 KRTAP9-8Q9BYQ0 159 aa6.55□□□□□ -1.36
SHMT2-230ENST00000557427 COX6B2Q6YFQ2 88 aa6.54□□□□□ -1.36
SHMT2-230ENST00000557427 HRES1P13985 223 aa6.52□□□□□ -1.37
SHMT2-230ENST00000557427 COA5Q86WW8 74 aa6.51□□□□□ -1.37
SHMT2-230ENST00000557427 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
SHMT2-230ENST00000557427 LCE2BO14633 110 aa6.49□□□□□ -1.37
SHMT2-230ENST00000557427 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
SHMT2-230ENST00000557427 C4orf26Q17RF5 130 aa6.48□□□□□ -1.37
SHMT2-230ENST00000557427 Q1T7F1 81 aa6.48□□□□□ -1.37
SHMT2-230ENST00000557427 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
SHMT2-230ENST00000557427 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
SHMT2-230ENST00000557427 Q75L30 129 aa6.47□□□□□ -1.37
SHMT2-230ENST00000557427 ACYP2P14621 99 aa6.46□□□□□ -1.38
SHMT2-230ENST00000557427 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
SHMT2-230ENST00000557427 V9GYY9 64 aa6.45□□□□□ -1.38
SHMT2-230ENST00000557427 NEBP20929 6669 aa6.44□□□□□ -1.38
SHMT2-230ENST00000557427 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
SHMT2-230ENST00000557427 A8MUN3 132 aa6.37□□□□□ -1.39
SHMT2-230ENST00000557427 MT2AP02795 61 aa6.37□□□□□ -1.39
SHMT2-230ENST00000557427 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
SHMT2-230ENST00000557427 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
SHMT2-230ENST00000557427 SPINK7P58062 85 aa6.34□□□□□ -1.39
SHMT2-230ENST00000557427 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
SHMT2-230ENST00000557427 MT1FP04733 61 aa6.33□□□□□ -1.4
SHMT2-230ENST00000557427 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
SHMT2-230ENST00000557427 PSPHP1O15172 72 aa6.29□□□□□ -1.4
SHMT2-230ENST00000557427 Q5VV11 94 aa6.28□□□□□ -1.4
SHMT2-230ENST00000557427 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
SHMT2-230ENST00000557427 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
SHMT2-230ENST00000557427 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
SHMT2-230ENST00000557427 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
SHMT2-230ENST00000557427 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
SHMT2-230ENST00000557427 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.42
SHMT2-230ENST00000557427 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
SHMT2-230ENST00000557427 RBM12B-AS1Q9P1G2 102 aa6.19□□□□□ -1.42
SHMT2-230ENST00000557427 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
SHMT2-230ENST00000557427 A0A1B0GU69 56 aa6.15□□□□□ -1.42
SHMT2-230ENST00000557427 SVIPQ8NHG7 77 aa6.13□□□□□ -1.43
SHMT2-230ENST00000557427 A6NED7 52 aa6.12□□□□□ -1.43
SHMT2-230ENST00000557427 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
SHMT2-230ENST00000557427 SEC61GP60059 68 aa6.06□□□□□ -1.44
SHMT2-230ENST00000557427 LCA10Q71F78 164 aa6.05□□□□□ -1.44
SHMT2-230ENST00000557427 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
SHMT2-230ENST00000557427 S4R3F8 94 aa6.02□□□□□ -1.45
SHMT2-230ENST00000557427 UQCR11O14957 56 aa6.01□□□□□ -1.45
SHMT2-230ENST00000557427 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
SHMT2-230ENST00000557427 A8MU10 97 aa6□□□□□ -1.45
SHMT2-230ENST00000557427 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
SHMT2-230ENST00000557427 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
SHMT2-230ENST00000557427 KMT2DO14686 5537 aa5.95□□□□□ -1.46
SHMT2-230ENST00000557427 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
SHMT2-230ENST00000557427 A0A1B0GU33 70 aa5.91□□□□□ -1.46
SHMT2-230ENST00000557427 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
SHMT2-230ENST00000557427 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
SHMT2-230ENST00000557427 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
SHMT2-230ENST00000557427 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
SHMT2-230ENST00000557427 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
SHMT2-230ENST00000557427 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
SHMT2-230ENST00000557427 H0YAA0 97 aa5.84□□□□□ -1.47
SHMT2-230ENST00000557427 A6NN06 94 aa5.83□□□□□ -1.48
SHMT2-230ENST00000557427 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
SHMT2-230ENST00000557427 P0C880 135 aa5.75□□□□□ -1.49
SHMT2-230ENST00000557427 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
SHMT2-230ENST00000557427 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
SHMT2-230ENST00000557427 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
SHMT2-230ENST00000557427 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
SHMT2-230ENST00000557427 M0QZ58 72 aa5.67□□□□□ -1.5
SHMT2-230ENST00000557427 K7ERS5 55 aa5.66□□□□□ -1.5
SHMT2-230ENST00000557427 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
SHMT2-230ENST00000557427 MT1BP07438 61 aa5.64□□□□□ -1.51
SHMT2-230ENST00000557427 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
SHMT2-230ENST00000557427 SPRR2EP22531 72 aa5.6□□□□□ -1.51
SHMT2-230ENST00000557427 SPRR2BP35325 72 aa5.6□□□□□ -1.51
SHMT2-230ENST00000557427 SPRR2AP35326 72 aa5.6□□□□□ -1.51
SHMT2-230ENST00000557427 A0A0D9SG42 100 aa5.59□□□□□ -1.51
SHMT2-230ENST00000557427 R4GN34 69 aa5.54□□□□□ -1.52
SHMT2-230ENST00000557427 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
SHMT2-230ENST00000557427 SPRR2FQ96RM1 72 aa5.52□□□□□ -1.53
SHMT2-230ENST00000557427 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
SHMT2-230ENST00000557427 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
SHMT2-230ENST00000557427 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
SHMT2-230ENST00000557427 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
SHMT2-230ENST00000557427 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
SHMT2-230ENST00000557427 ROMO1P60602 79 aa5.45□□□□□ -1.54
SHMT2-230ENST00000557427 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
SHMT2-230ENST00000557427 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
SHMT2-230ENST00000557427 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
SHMT2-230ENST00000557427 SPRR2DP22532 72 aa5.41□□□□□ -1.54
SHMT2-230ENST00000557427 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
SHMT2-230ENST00000557427 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
SHMT2-230ENST00000557427 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
SHMT2-230ENST00000557427 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
SHMT2-230ENST00000557427 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
SHMT2-230ENST00000557427 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
SHMT2-230ENST00000557427 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms