RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 DNAH2Q9P225 4427 aa5.65□□□□□ -1.51
SUPT16H-207ENST00000557394 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
SUPT16H-207ENST00000557394 RYR2Q92736 4967 aa5.63□□□□□ -1.51
SUPT16H-207ENST00000557394 KRTAP10-2P60368 255 aa5.63□□□□□ -1.51
SUPT16H-207ENST00000557394 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
SUPT16H-207ENST00000557394 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
SUPT16H-207ENST00000557394 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
SUPT16H-207ENST00000557394 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
SUPT16H-207ENST00000557394 A0A1B0GVY2 172 aa5.59□□□□□ -1.51
SUPT16H-207ENST00000557394 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
SUPT16H-207ENST00000557394 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
SUPT16H-207ENST00000557394 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
SUPT16H-207ENST00000557394 FAT2Q9NYQ8 4349 aa5.56□□□□□ -1.52
SUPT16H-207ENST00000557394 KRTAP10-1P60331 282 aa5.56□□□□□ -1.52
SUPT16H-207ENST00000557394 DNAH11Q96DT5 4516 aa5.55□□□□□ -1.52
SUPT16H-207ENST00000557394 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
SUPT16H-207ENST00000557394 PKD1P98161 4303 aa5.53□□□□□ -1.52
SUPT16H-207ENST00000557394 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
SUPT16H-207ENST00000557394 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
SUPT16H-207ENST00000557394 DNAH5Q8TE73 4624 aa5.49□□□□□ -1.53
SUPT16H-207ENST00000557394 RYR3Q15413 4870 aa5.48□□□□□ -1.53
SUPT16H-207ENST00000557394 RPS29P62273 56 aaKnown RBP5.48□□□□□ -1.53
SUPT16H-207ENST00000557394 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
SUPT16H-207ENST00000557394 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
SUPT16H-207ENST00000557394 R4GN34 69 aa5.46□□□□□ -1.54
SUPT16H-207ENST00000557394 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
SUPT16H-207ENST00000557394 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
SUPT16H-207ENST00000557394 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
SUPT16H-207ENST00000557394 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
SUPT16H-207ENST00000557394 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
SUPT16H-207ENST00000557394 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
SUPT16H-207ENST00000557394 A0A0D9SG42 100 aa5.38□□□□□ -1.55
SUPT16H-207ENST00000557394 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
SUPT16H-207ENST00000557394 SMR3BP02814 79 aaPredicted RBP5.36□□□□□ -1.55
SUPT16H-207ENST00000557394 S4R3F8 94 aa5.35□□□□□ -1.55
SUPT16H-207ENST00000557394 APOBP04114 4563 aaKnown RBP5.34□□□□□ -1.55
SUPT16H-207ENST00000557394 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
SUPT16H-207ENST00000557394 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
SUPT16H-207ENST00000557394 EPPK1P58107 5090 aaKnown RBP5.3□□□□□ -1.56
SUPT16H-207ENST00000557394 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
SUPT16H-207ENST00000557394 Q5VSD8 79 aa5.28□□□□□ -1.56
SUPT16H-207ENST00000557394 RYR1P21817 5038 aa5.27□□□□□ -1.57
SUPT16H-207ENST00000557394 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
SUPT16H-207ENST00000557394 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
SUPT16H-207ENST00000557394 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
SUPT16H-207ENST00000557394 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
SUPT16H-207ENST00000557394 HSPG2P98160 4391 aa5.24□□□□□ -1.57
SUPT16H-207ENST00000557394 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
SUPT16H-207ENST00000557394 FAT1Q14517 4588 aa5.22□□□□□ -1.57
SUPT16H-207ENST00000557394 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
SUPT16H-207ENST00000557394 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
SUPT16H-207ENST00000557394 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
SUPT16H-207ENST00000557394 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
SUPT16H-207ENST00000557394 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
SUPT16H-207ENST00000557394 DMBT1Q9UGM3 2413 aaPredicted RBP5.18□□□□□ -1.58
SUPT16H-207ENST00000557394 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
SUPT16H-207ENST00000557394 M0QZ58 72 aa5.11□□□□□ -1.59
SUPT16H-207ENST00000557394 HERC2O95714 4834 aa5.11□□□□□ -1.59
SUPT16H-207ENST00000557394 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
SUPT16H-207ENST00000557394 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
SUPT16H-207ENST00000557394 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
SUPT16H-207ENST00000557394 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
SUPT16H-207ENST00000557394 INE1O15225 51 aa5.04□□□□□ -1.6
SUPT16H-207ENST00000557394 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
SUPT16H-207ENST00000557394 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
SUPT16H-207ENST00000557394 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
SUPT16H-207ENST00000557394 TNXBP22105 4242 aa4.99□□□□□ -1.61
SUPT16H-207ENST00000557394 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
SUPT16H-207ENST00000557394 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
SUPT16H-207ENST00000557394 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
SUPT16H-207ENST00000557394 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
SUPT16H-207ENST00000557394 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
SUPT16H-207ENST00000557394 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
SUPT16H-207ENST00000557394 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
SUPT16H-207ENST00000557394 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
SUPT16H-207ENST00000557394 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
SUPT16H-207ENST00000557394 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
SUPT16H-207ENST00000557394 HERC1Q15751 4861 aa4.69□□□□□ -1.66
SUPT16H-207ENST00000557394 LPAP08519 4548 aa4.69□□□□□ -1.66
SUPT16H-207ENST00000557394 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
SUPT16H-207ENST00000557394 LRP2P98164 4655 aa4.61□□□□□ -1.67
SUPT16H-207ENST00000557394 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
SUPT16H-207ENST00000557394 TNP1P09430 55 aa4.55□□□□□ -1.68
SUPT16H-207ENST00000557394 KRTAP4-1Q9BYQ7 146 aa4.54□□□□□ -1.68
SUPT16H-207ENST00000557394 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
SUPT16H-207ENST00000557394 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
SUPT16H-207ENST00000557394 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
SUPT16H-207ENST00000557394 MUC2Q02817 5179 aa4.35□□□□□ -1.71
SUPT16H-207ENST00000557394 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
SUPT16H-207ENST00000557394 MT1HP80294 61 aa4.27□□□□□ -1.73
SUPT16H-207ENST00000557394 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
SUPT16H-207ENST00000557394 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
SUPT16H-207ENST00000557394 M0R2T5 61 aa4.22□□□□□ -1.73
SUPT16H-207ENST00000557394 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
SUPT16H-207ENST00000557394 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
SUPT16H-207ENST00000557394 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.74
SUPT16H-207ENST00000557394 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
SUPT16H-207ENST00000557394 MT2AP02795 61 aa4.09□□□□□ -1.76
SUPT16H-207ENST00000557394 MT1FP04733 61 aa4.05□□□□□ -1.76
SUPT16H-207ENST00000557394 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms