RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 C9orf92A6NGG3 77 aa4.84□□□□□ -1.63
PPP4R3A-212ENST00000557382 ATP11AUNQ6ZP68 121 aa4.84□□□□□ -1.63
PPP4R3A-212ENST00000557382 RYR2Q92736 4967 aa4.83□□□□□ -1.64
PPP4R3A-212ENST00000557382 Q5VSD8 79 aa4.83□□□□□ -1.64
PPP4R3A-212ENST00000557382 LCA10Q71F78 164 aa4.83□□□□□ -1.64
PPP4R3A-212ENST00000557382 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
PPP4R3A-212ENST00000557382 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
PPP4R3A-212ENST00000557382 A0A1B0GU69 56 aa4.81□□□□□ -1.64
PPP4R3A-212ENST00000557382 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
PPP4R3A-212ENST00000557382 Q8N1X5 172 aa4.81□□□□□ -1.64
PPP4R3A-212ENST00000557382 SPINK7P58062 85 aa4.79□□□□□ -1.64
PPP4R3A-212ENST00000557382 A8MU10 97 aa4.76□□□□□ -1.65
PPP4R3A-212ENST00000557382 FAT1Q14517 4588 aa4.76□□□□□ -1.65
PPP4R3A-212ENST00000557382 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
PPP4R3A-212ENST00000557382 UQCR11O14957 56 aa4.74□□□□□ -1.65
PPP4R3A-212ENST00000557382 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
PPP4R3A-212ENST00000557382 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
PPP4R3A-212ENST00000557382 COX6B2Q6YFQ2 88 aa4.74□□□□□ -1.65
PPP4R3A-212ENST00000557382 SEC61GP60059 68 aa4.73□□□□□ -1.65
PPP4R3A-212ENST00000557382 RPL37P61927 97 aaKnown RBP4.73□□□□□ -1.65
PPP4R3A-212ENST00000557382 KRTAP3-1Q9BYR8 98 aa4.73□□□□□ -1.65
PPP4R3A-212ENST00000557382 A6NN06 94 aa4.71□□□□□ -1.66
PPP4R3A-212ENST00000557382 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
PPP4R3A-212ENST00000557382 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
PPP4R3A-212ENST00000557382 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
PPP4R3A-212ENST00000557382 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
PPP4R3A-212ENST00000557382 TNXBP22105 4242 aa4.66□□□□□ -1.66
PPP4R3A-212ENST00000557382 DMBT1Q9UGM3 2413 aaPredicted RBP4.66□□□□□ -1.66
PPP4R3A-212ENST00000557382 HSPG2P98160 4391 aa4.65□□□□□ -1.66
PPP4R3A-212ENST00000557382 RYR1P21817 5038 aa4.65□□□□□ -1.67
PPP4R3A-212ENST00000557382 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
PPP4R3A-212ENST00000557382 TPRXLQ17RH7 258 aa4.62□□□□□ -1.67
PPP4R3A-212ENST00000557382 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
PPP4R3A-212ENST00000557382 A0A1B0GU33 70 aa4.6□□□□□ -1.67
PPP4R3A-212ENST00000557382 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
PPP4R3A-212ENST00000557382 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
PPP4R3A-212ENST00000557382 S4R3F8 94 aa4.55□□□□□ -1.68
PPP4R3A-212ENST00000557382 H0YAA0 97 aa4.54□□□□□ -1.68
PPP4R3A-212ENST00000557382 RYR3Q15413 4870 aa4.53□□□□□ -1.68
PPP4R3A-212ENST00000557382 RBM12B-AS1Q9P1G2 102 aa4.51□□□□□ -1.69
PPP4R3A-212ENST00000557382 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
PPP4R3A-212ENST00000557382 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
PPP4R3A-212ENST00000557382 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
PPP4R3A-212ENST00000557382 K7ERS5 55 aa4.46□□□□□ -1.7
PPP4R3A-212ENST00000557382 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
PPP4R3A-212ENST00000557382 MYCBP2O75592 4640 aa4.43□□□□□ -1.7
PPP4R3A-212ENST00000557382 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
PPP4R3A-212ENST00000557382 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
PPP4R3A-212ENST00000557382 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
PPP4R3A-212ENST00000557382 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
PPP4R3A-212ENST00000557382 P0C880 135 aa4.36□□□□□ -1.71
PPP4R3A-212ENST00000557382 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
PPP4R3A-212ENST00000557382 M0QZ58 72 aa4.35□□□□□ -1.71
PPP4R3A-212ENST00000557382 ROMO1P60602 79 aa4.31□□□□□ -1.72
PPP4R3A-212ENST00000557382 LRP2P98164 4655 aa4.31□□□□□ -1.72
PPP4R3A-212ENST00000557382 A0A0D9SG42 100 aa4.29□□□□□ -1.72
PPP4R3A-212ENST00000557382 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
PPP4R3A-212ENST00000557382 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
PPP4R3A-212ENST00000557382 KRTAP4-1Q9BYQ7 146 aa4.27□□□□□ -1.73
PPP4R3A-212ENST00000557382 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
PPP4R3A-212ENST00000557382 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
PPP4R3A-212ENST00000557382 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
PPP4R3A-212ENST00000557382 HERC2O95714 4834 aa4.22□□□□□ -1.73
PPP4R3A-212ENST00000557382 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
PPP4R3A-212ENST00000557382 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
PPP4R3A-212ENST00000557382 LPAP08519 4548 aa4.22□□□□□ -1.73
PPP4R3A-212ENST00000557382 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
PPP4R3A-212ENST00000557382 R4GN34 69 aa4.2□□□□□ -1.74
PPP4R3A-212ENST00000557382 ABCA13Q86UQ4 5058 aa4.2□□□□□ -1.74
PPP4R3A-212ENST00000557382 SPINT4Q6UDR6 99 aa4.19□□□□□ -1.74
PPP4R3A-212ENST00000557382 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
PPP4R3A-212ENST00000557382 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
PPP4R3A-212ENST00000557382 HERC1Q15751 4861 aa4.02□□□□□ -1.77
PPP4R3A-212ENST00000557382 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
PPP4R3A-212ENST00000557382 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
PPP4R3A-212ENST00000557382 HMCN2Q8NDA2 5059 aa3.95□□□□□ -1.78
PPP4R3A-212ENST00000557382 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
PPP4R3A-212ENST00000557382 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
PPP4R3A-212ENST00000557382 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
PPP4R3A-212ENST00000557382 MT1HP80294 61 aa3.92□□□□□ -1.78
PPP4R3A-212ENST00000557382 M0R2T5 61 aa3.89□□□□□ -1.79
PPP4R3A-212ENST00000557382 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
PPP4R3A-212ENST00000557382 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
PPP4R3A-212ENST00000557382 TNP1P09430 55 aa3.85□□□□□ -1.79
PPP4R3A-212ENST00000557382 MT2AP02795 61 aa3.83□□□□□ -1.8
PPP4R3A-212ENST00000557382 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
PPP4R3A-212ENST00000557382 MT1FP04733 61 aa3.8□□□□□ -1.8
PPP4R3A-212ENST00000557382 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
PPP4R3A-212ENST00000557382 MUC2Q02817 5179 aa3.78□□□□□ -1.8
PPP4R3A-212ENST00000557382 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
PPP4R3A-212ENST00000557382 MT1BP07438 61 aa3.69□□□□□ -1.82
PPP4R3A-212ENST00000557382 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
PPP4R3A-212ENST00000557382 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
PPP4R3A-212ENST00000557382 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
PPP4R3A-212ENST00000557382 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
PPP4R3A-212ENST00000557382 MT1XP80297 61 aa3.62□□□□□ -1.83
PPP4R3A-212ENST00000557382 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
PPP4R3A-212ENST00000557382 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
PPP4R3A-212ENST00000557382 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
PPP4R3A-212ENST00000557382 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms