RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 HSPG2P98160 4391 aa8.2□□□□□ -1.1
PAPOLA-223ENST00000557320 HERC2O95714 4834 aa8.19□□□□□ -1.1
PAPOLA-223ENST00000557320 COX6B2Q6YFQ2 88 aa8.18□□□□□ -1.1
PAPOLA-223ENST00000557320 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
PAPOLA-223ENST00000557320 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
PAPOLA-223ENST00000557320 RPL37P61927 97 aaKnown RBP8.16□□□□□ -1.1
PAPOLA-223ENST00000557320 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
PAPOLA-223ENST00000557320 KRTAP17-1Q9BYP8 105 aa8.11□□□□□ -1.11
PAPOLA-223ENST00000557320 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
PAPOLA-223ENST00000557320 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.12
PAPOLA-223ENST00000557320 PKHD1L1Q86WI1 4243 aa8.01□□□□□ -1.13
PAPOLA-223ENST00000557320 Q5VSD8 79 aa8□□□□□ -1.13
PAPOLA-223ENST00000557320 FAT1Q14517 4588 aa8□□□□□ -1.13
PAPOLA-223ENST00000557320 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
PAPOLA-223ENST00000557320 SMR3BP02814 79 aaPredicted RBP7.98□□□□□ -1.13
PAPOLA-223ENST00000557320 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
PAPOLA-223ENST00000557320 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
PAPOLA-223ENST00000557320 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
PAPOLA-223ENST00000557320 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
PAPOLA-223ENST00000557320 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
PAPOLA-223ENST00000557320 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
PAPOLA-223ENST00000557320 S4R3F8 94 aa7.82□□□□□ -1.16
PAPOLA-223ENST00000557320 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
PAPOLA-223ENST00000557320 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
PAPOLA-223ENST00000557320 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
PAPOLA-223ENST00000557320 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
PAPOLA-223ENST00000557320 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
PAPOLA-223ENST00000557320 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
PAPOLA-223ENST00000557320 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
PAPOLA-223ENST00000557320 TNXBP22105 4242 aa7.66□□□□□ -1.18
PAPOLA-223ENST00000557320 KRTAP10-8P60410 259 aa7.65□□□□□ -1.19
PAPOLA-223ENST00000557320 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
PAPOLA-223ENST00000557320 J3QL48 77 aa7.6□□□□□ -1.19
PAPOLA-223ENST00000557320 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
PAPOLA-223ENST00000557320 XP32Q5T750 250 aa7.58□□□□□ -1.2
PAPOLA-223ENST00000557320 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
PAPOLA-223ENST00000557320 SEC61BP60468 96 aaKnown RBP7.55□□□□□ -1.2
PAPOLA-223ENST00000557320 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
PAPOLA-223ENST00000557320 HERC1Q15751 4861 aa7.47□□□□□ -1.21
PAPOLA-223ENST00000557320 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
PAPOLA-223ENST00000557320 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
PAPOLA-223ENST00000557320 M0QZ58 72 aa7.31□□□□□ -1.24
PAPOLA-223ENST00000557320 R4GN34 69 aa7.19□□□□□ -1.26
PAPOLA-223ENST00000557320 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.27
PAPOLA-223ENST00000557320 LPAP08519 4548 aa7.14□□□□□ -1.27
PAPOLA-223ENST00000557320 LRP2P98164 4655 aa7.11□□□□□ -1.27
PAPOLA-223ENST00000557320 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
PAPOLA-223ENST00000557320 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
PAPOLA-223ENST00000557320 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
PAPOLA-223ENST00000557320 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
PAPOLA-223ENST00000557320 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
PAPOLA-223ENST00000557320 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
PAPOLA-223ENST00000557320 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
PAPOLA-223ENST00000557320 MUC2Q02817 5179 aa6.72□□□□□ -1.33
PAPOLA-223ENST00000557320 TNP1P09430 55 aa6.69□□□□□ -1.34
PAPOLA-223ENST00000557320 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
PAPOLA-223ENST00000557320 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
PAPOLA-223ENST00000557320 INE1O15225 51 aa6.63□□□□□ -1.35
PAPOLA-223ENST00000557320 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
PAPOLA-223ENST00000557320 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
PAPOLA-223ENST00000557320 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
PAPOLA-223ENST00000557320 MT1HP80294 61 aa6.5□□□□□ -1.37
PAPOLA-223ENST00000557320 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
PAPOLA-223ENST00000557320 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
PAPOLA-223ENST00000557320 M0R2T5 61 aa6.26□□□□□ -1.41
PAPOLA-223ENST00000557320 LCE2DQ5TA82 110 aaPredicted RBP6.21□□□□□ -1.42
PAPOLA-223ENST00000557320 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
PAPOLA-223ENST00000557320 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
PAPOLA-223ENST00000557320 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
PAPOLA-223ENST00000557320 MT2AP02795 61 aa6.12□□□□□ -1.43
PAPOLA-223ENST00000557320 MT1FP04733 61 aa6.07□□□□□ -1.44
PAPOLA-223ENST00000557320 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
PAPOLA-223ENST00000557320 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
PAPOLA-223ENST00000557320 LCE2BO14633 110 aa5.89□□□□□ -1.47
PAPOLA-223ENST00000557320 KRTAP9-6A0A140TA67 174 aa5.85□□□□□ -1.47
PAPOLA-223ENST00000557320 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
PAPOLA-223ENST00000557320 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
PAPOLA-223ENST00000557320 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
PAPOLA-223ENST00000557320 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
PAPOLA-223ENST00000557320 USH2AO75445 5202 aa5.8□□□□□ -1.48
PAPOLA-223ENST00000557320 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
PAPOLA-223ENST00000557320 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
PAPOLA-223ENST00000557320 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
PAPOLA-223ENST00000557320 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
PAPOLA-223ENST00000557320 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
PAPOLA-223ENST00000557320 MT1BP07438 61 aa5.67□□□□□ -1.5
PAPOLA-223ENST00000557320 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
PAPOLA-223ENST00000557320 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
PAPOLA-223ENST00000557320 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
PAPOLA-223ENST00000557320 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
PAPOLA-223ENST00000557320 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
PAPOLA-223ENST00000557320 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
PAPOLA-223ENST00000557320 MT1XP80297 61 aa5.37□□□□□ -1.55
PAPOLA-223ENST00000557320 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
PAPOLA-223ENST00000557320 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
PAPOLA-223ENST00000557320 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
PAPOLA-223ENST00000557320 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
PAPOLA-223ENST00000557320 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
PAPOLA-223ENST00000557320 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
PAPOLA-223ENST00000557320 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms