RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.87
FOXN3-215ENST00000557261 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
FOXN3-215ENST00000557261 HRCT1Q6UXD1 115 aa3.33□□□□□ -1.88
FOXN3-215ENST00000557261 Q8N9L7 120 aa3.33□□□□□ -1.88
FOXN3-215ENST00000557261 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
FOXN3-215ENST00000557261 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
FOXN3-215ENST00000557261 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
FOXN3-215ENST00000557261 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
FOXN3-215ENST00000557261 A8MUN3 132 aa3.3□□□□□ -1.88
FOXN3-215ENST00000557261 UQCRQO14949 82 aa3.3□□□□□ -1.88
FOXN3-215ENST00000557261 COX7CP15954 63 aa3.3□□□□□ -1.88
FOXN3-215ENST00000557261 TMEM254Q8TBM7 123 aa3.3□□□□□ -1.88
FOXN3-215ENST00000557261 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
FOXN3-215ENST00000557261 CASC2Q6XLA1 102 aa3.29□□□□□ -1.88
FOXN3-215ENST00000557261 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
FOXN3-215ENST00000557261 TP53AIP1Q9HCN2 124 aa3.29□□□□□ -1.88
FOXN3-215ENST00000557261 LRP2P98164 4655 aa3.27□□□□□ -1.89
FOXN3-215ENST00000557261 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
FOXN3-215ENST00000557261 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
FOXN3-215ENST00000557261 H3BPC8 53 aa3.26□□□□□ -1.89
FOXN3-215ENST00000557261 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
FOXN3-215ENST00000557261 A8MU10 97 aa3.25□□□□□ -1.89
FOXN3-215ENST00000557261 WFDC13Q8IUB5 93 aa3.25□□□□□ -1.89
FOXN3-215ENST00000557261 NDUFC1O43677 76 aa3.24□□□□□ -1.89
FOXN3-215ENST00000557261 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
FOXN3-215ENST00000557261 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
FOXN3-215ENST00000557261 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
FOXN3-215ENST00000557261 CCDC179H3BU77 68 aa3.22□□□□□ -1.89
FOXN3-215ENST00000557261 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
FOXN3-215ENST00000557261 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
FOXN3-215ENST00000557261 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.9
FOXN3-215ENST00000557261 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
FOXN3-215ENST00000557261 LOC101927531A0A1B0GV80 90 aa3.19□□□□□ -1.9
FOXN3-215ENST00000557261 H0Y9P7 68 aa3.19□□□□□ -1.9
FOXN3-215ENST00000557261 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-215ENST00000557261 TMEM258P61165 79 aa3.19□□□□□ -1.9
FOXN3-215ENST00000557261 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
FOXN3-215ENST00000557261 H7BZZ5 65 aa3.18□□□□□ -1.9
FOXN3-215ENST00000557261 RETNLBQ9BQ08 111 aa3.17□□□□□ -1.9
FOXN3-215ENST00000557261 R4GN34 69 aa3.17□□□□□ -1.9
FOXN3-215ENST00000557261 C1orf64Q8NEQ6 169 aa3.16□□□□□ -1.9
FOXN3-215ENST00000557261 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
FOXN3-215ENST00000557261 LINC00208Q96KT6 92 aa3.15□□□□□ -1.91
FOXN3-215ENST00000557261 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
FOXN3-215ENST00000557261 SNURFQ9Y675 71 aa3.15□□□□□ -1.91
FOXN3-215ENST00000557261 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
FOXN3-215ENST00000557261 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
FOXN3-215ENST00000557261 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
FOXN3-215ENST00000557261 MUC2Q02817 5179 aa3.13□□□□□ -1.91
FOXN3-215ENST00000557261 A0A1B0GU33 70 aa3.13□□□□□ -1.91
FOXN3-215ENST00000557261 C9orf92A6NGG3 77 aa3.13□□□□□ -1.91
FOXN3-215ENST00000557261 CYP4F30PQ9H0H9 118 aa3.13□□□□□ -1.91
FOXN3-215ENST00000557261 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
FOXN3-215ENST00000557261 C7orf65Q6ZTY9 151 aa3.12□□□□□ -1.91
FOXN3-215ENST00000557261 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
FOXN3-215ENST00000557261 HRES1P13985 223 aa3.1□□□□□ -1.91
FOXN3-215ENST00000557261 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
FOXN3-215ENST00000557261 ATP11AUNQ6ZP68 121 aa3.1□□□□□ -1.91
FOXN3-215ENST00000557261 MUC17Q685J3 4493 aa3.09□□□□□ -1.91
FOXN3-215ENST00000557261 LPAP08519 4548 aa3.09□□□□□ -1.91
FOXN3-215ENST00000557261 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
FOXN3-215ENST00000557261 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
FOXN3-215ENST00000557261 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
FOXN3-215ENST00000557261 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
FOXN3-215ENST00000557261 SPINK7P58062 85 aa3.05□□□□□ -1.92
FOXN3-215ENST00000557261 PCOTHQ58A44 107 aa3.05□□□□□ -1.92
FOXN3-215ENST00000557261 LCA10Q71F78 164 aa3.03□□□□□ -1.92
FOXN3-215ENST00000557261 ACYP2P14621 99 aa3.02□□□□□ -1.93
FOXN3-215ENST00000557261 COX6B2Q6YFQ2 88 aa3.01□□□□□ -1.93
FOXN3-215ENST00000557261 COA5Q86WW8 74 aa3□□□□□ -1.93
FOXN3-215ENST00000557261 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
FOXN3-215ENST00000557261 LINC01554Q52M75 96 aa2.98□□□□□ -1.93
FOXN3-215ENST00000557261 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
FOXN3-215ENST00000557261 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
FOXN3-215ENST00000557261 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
FOXN3-215ENST00000557261 Q1T7F1 81 aa2.94□□□□□ -1.94
FOXN3-215ENST00000557261 H1FX-AS1Q4G0G2 97 aa2.93□□□□□ -1.94
FOXN3-215ENST00000557261 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
FOXN3-215ENST00000557261 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
FOXN3-215ENST00000557261 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
FOXN3-215ENST00000557261 S4R3F8 94 aa2.9□□□□□ -1.95
FOXN3-215ENST00000557261 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
FOXN3-215ENST00000557261 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
FOXN3-215ENST00000557261 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
FOXN3-215ENST00000557261 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
FOXN3-215ENST00000557261 H0YAA0 97 aa2.86□□□□□ -1.95
FOXN3-215ENST00000557261 P0C880 135 aa2.85□□□□□ -1.95
FOXN3-215ENST00000557261 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
FOXN3-215ENST00000557261 CSAG1Q6PB30 78 aa2.84□□□□□ -1.95
FOXN3-215ENST00000557261 A0A1B0GU69 56 aa2.83□□□□□ -1.96
FOXN3-215ENST00000557261 Q5VV11 94 aa2.83□□□□□ -1.96
FOXN3-215ENST00000557261 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
FOXN3-215ENST00000557261 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
FOXN3-215ENST00000557261 UQCR11O14957 56 aa2.78□□□□□ -1.96
FOXN3-215ENST00000557261 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
FOXN3-215ENST00000557261 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
FOXN3-215ENST00000557261 MT1HP80294 61 aa2.75□□□□□ -1.97
FOXN3-215ENST00000557261 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
FOXN3-215ENST00000557261 SPATA8Q6RVD6 105 aa2.74□□□□□ -1.97
FOXN3-215ENST00000557261 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms