RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 MIR22HGQ0VDD5 57 aa10.07□□□□□ -0.8
FOXN3-214ENST00000557258 UQCR11O14957 56 aa10.07□□□□□ -0.8
FOXN3-214ENST00000557258 LRP2P98164 4655 aa10.07□□□□□ -0.8
FOXN3-214ENST00000557258 RPL37P61927 97 aaKnown RBP10.02□□□□□ -0.8
FOXN3-214ENST00000557258 COX6B2Q6YFQ2 88 aa10.02□□□□□ -0.8
FOXN3-214ENST00000557258 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
FOXN3-214ENST00000557258 PRAC1Q96KF2 57 aa10□□□□□ -0.81
FOXN3-214ENST00000557258 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
FOXN3-214ENST00000557258 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
FOXN3-214ENST00000557258 H0YAA0 97 aa9.89□□□□□ -0.83
FOXN3-214ENST00000557258 A0A1B0GU33 70 aa9.84□□□□□ -0.83
FOXN3-214ENST00000557258 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
FOXN3-214ENST00000557258 H1FX-AS1Q4G0G2 97 aa9.79□□□□□ -0.84
FOXN3-214ENST00000557258 S4R3F8 94 aa9.74□□□□□ -0.85
FOXN3-214ENST00000557258 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
FOXN3-214ENST00000557258 HERC2O95714 4834 aa9.71□□□□□ -0.86
FOXN3-214ENST00000557258 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
FOXN3-214ENST00000557258 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.86
FOXN3-214ENST00000557258 CSAG1Q6PB30 78 aa9.63□□□□□ -0.87
FOXN3-214ENST00000557258 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
FOXN3-214ENST00000557258 A0A0D9SG42 100 aa9.61□□□□□ -0.87
FOXN3-214ENST00000557258 P0C880 135 aa9.6□□□□□ -0.87
FOXN3-214ENST00000557258 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
FOXN3-214ENST00000557258 MUC2Q02817 5179 aa9.58□□□□□ -0.88
FOXN3-214ENST00000557258 J3QL48 77 aa9.56□□□□□ -0.88
FOXN3-214ENST00000557258 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
FOXN3-214ENST00000557258 MUC17Q685J3 4493 aa9.44□□□□□ -0.9
FOXN3-214ENST00000557258 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
FOXN3-214ENST00000557258 HERC1Q15751 4861 aa9.42□□□□□ -0.9
FOXN3-214ENST00000557258 H3BS24 57 aa9.41□□□□□ -0.9
FOXN3-214ENST00000557258 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
FOXN3-214ENST00000557258 K7ERS5 55 aa9.37□□□□□ -0.91
FOXN3-214ENST00000557258 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
FOXN3-214ENST00000557258 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
FOXN3-214ENST00000557258 KRTAP12-2P59991 146 aa9.27□□□□□ -0.93
FOXN3-214ENST00000557258 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
FOXN3-214ENST00000557258 SPINT4Q6UDR6 99 aa9.25□□□□□ -0.93
FOXN3-214ENST00000557258 ROMO1P60602 79 aa9.16□□□□□ -0.94
FOXN3-214ENST00000557258 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
FOXN3-214ENST00000557258 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
FOXN3-214ENST00000557258 M0QZ58 72 aa9.14□□□□□ -0.95
FOXN3-214ENST00000557258 FAT4Q6V0I7 4981 aa9.1□□□□□ -0.95
FOXN3-214ENST00000557258 HMCN2Q8NDA2 5059 aa9.09□□□□□ -0.95
FOXN3-214ENST00000557258 KRTAP19-2Q3LHN2 52 aa9.08□□□□□ -0.96
FOXN3-214ENST00000557258 R4GN34 69 aa9.08□□□□□ -0.96
FOXN3-214ENST00000557258 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
FOXN3-214ENST00000557258 RNF213Q63HN8 5207 aa9□□□□□ -0.97
FOXN3-214ENST00000557258 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
FOXN3-214ENST00000557258 UBR4Q5T4S7 5183 aa8.93□□□□□ -0.98
FOXN3-214ENST00000557258 LCE2CQ5TA81 110 aa8.67□□□□□ -1.02
FOXN3-214ENST00000557258 CAMK2N1Q7Z7J9 78 aa8.61□□□□□ -1.03
FOXN3-214ENST00000557258 M0R2T5 61 aa8.6□□□□□ -1.03
FOXN3-214ENST00000557258 NDUFAF8A1L188 74 aa8.54□□□□□ -1.04
FOXN3-214ENST00000557258 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
FOXN3-214ENST00000557258 MT1HP80294 61 aa8.47□□□□□ -1.05
FOXN3-214ENST00000557258 KRTAP19-1Q8IUB9 90 aa8.33□□□□□ -1.08
FOXN3-214ENST00000557258 MT1FP04733 61 aa8.32□□□□□ -1.08
FOXN3-214ENST00000557258 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
FOXN3-214ENST00000557258 MT2AP02795 61 aa8.28□□□□□ -1.08
FOXN3-214ENST00000557258 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
FOXN3-214ENST00000557258 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
FOXN3-214ENST00000557258 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
FOXN3-214ENST00000557258 TNP1P09430 55 aa8.15□□□□□ -1.11
FOXN3-214ENST00000557258 PP632Q6XCG6 107 aa8.05□□□□□ -1.12
FOXN3-214ENST00000557258 USH2AO75445 5202 aa7.97□□□□□ -1.13
FOXN3-214ENST00000557258 MT1BP07438 61 aa7.93□□□□□ -1.14
FOXN3-214ENST00000557258 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
FOXN3-214ENST00000557258 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
FOXN3-214ENST00000557258 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
FOXN3-214ENST00000557258 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
FOXN3-214ENST00000557258 MT1XP80297 61 aa7.83□□□□□ -1.16
FOXN3-214ENST00000557258 LUZP6Q538Z0 58 aa7.75□□□□□ -1.17
FOXN3-214ENST00000557258 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
FOXN3-214ENST00000557258 LCE2BO14633 110 aa7.68□□□□□ -1.18
FOXN3-214ENST00000557258 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
FOXN3-214ENST00000557258 KMT2DO14686 5537 aa7.68□□□□□ -1.18
FOXN3-214ENST00000557258 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
FOXN3-214ENST00000557258 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
FOXN3-214ENST00000557258 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
FOXN3-214ENST00000557258 FSIP2Q5CZC0 6907 aa7.56□□□□□ -1.2
FOXN3-214ENST00000557258 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
FOXN3-214ENST00000557258 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
FOXN3-214ENST00000557258 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
FOXN3-214ENST00000557258 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
FOXN3-214ENST00000557258 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
FOXN3-214ENST00000557258 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
FOXN3-214ENST00000557258 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
FOXN3-214ENST00000557258 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
FOXN3-214ENST00000557258 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
FOXN3-214ENST00000557258 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.29
FOXN3-214ENST00000557258 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
FOXN3-214ENST00000557258 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-214ENST00000557258 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
FOXN3-214ENST00000557258 MUC12Q9UKN1 5478 aa6.82□□□□□ -1.32
FOXN3-214ENST00000557258 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
FOXN3-214ENST00000557258 MT1EP04732 61 aa6.77□□□□□ -1.33
FOXN3-214ENST00000557258 MT1LQ93083 61 aa6.73□□□□□ -1.33
FOXN3-214ENST00000557258 INE1O15225 51 aa6.72□□□□□ -1.33
FOXN3-214ENST00000557258 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
FOXN3-214ENST00000557258 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms