RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
APEX1-216ENST00000557159 ROMO1P60602 79 aa6.85□□□□□ -1.31
APEX1-216ENST00000557159 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
APEX1-216ENST00000557159 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
APEX1-216ENST00000557159 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
APEX1-216ENST00000557159 Q5VSD8 79 aa6.84□□□□□ -1.31
APEX1-216ENST00000557159 K7ERS5 55 aa6.78□□□□□ -1.32
APEX1-216ENST00000557159 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
APEX1-216ENST00000557159 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
APEX1-216ENST00000557159 DMBT1Q9UGM3 2413 aaPredicted RBP6.69□□□□□ -1.34
APEX1-216ENST00000557159 FLG2Q5D862 2391 aaPredicted RBP6.69□□□□□ -1.34
APEX1-216ENST00000557159 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
APEX1-216ENST00000557159 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
APEX1-216ENST00000557159 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
APEX1-216ENST00000557159 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
APEX1-216ENST00000557159 RPL37P61927 97 aaKnown RBP6.6□□□□□ -1.35
APEX1-216ENST00000557159 P0C880 135 aa6.59□□□□□ -1.35
APEX1-216ENST00000557159 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
APEX1-216ENST00000557159 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
APEX1-216ENST00000557159 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
APEX1-216ENST00000557159 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
APEX1-216ENST00000557159 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
APEX1-216ENST00000557159 TNXBP22105 4242 aa6.5□□□□□ -1.37
APEX1-216ENST00000557159 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
APEX1-216ENST00000557159 J3QL48 77 aa6.48□□□□□ -1.37
APEX1-216ENST00000557159 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
APEX1-216ENST00000557159 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
APEX1-216ENST00000557159 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.37
APEX1-216ENST00000557159 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
APEX1-216ENST00000557159 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
APEX1-216ENST00000557159 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
APEX1-216ENST00000557159 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
APEX1-216ENST00000557159 S4R3F8 94 aa6.36□□□□□ -1.39
APEX1-216ENST00000557159 A0A0D9SG42 100 aa6.34□□□□□ -1.39
APEX1-216ENST00000557159 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
APEX1-216ENST00000557159 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
APEX1-216ENST00000557159 XP32Q5T750 250 aa6.29□□□□□ -1.4
APEX1-216ENST00000557159 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
APEX1-216ENST00000557159 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
APEX1-216ENST00000557159 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
APEX1-216ENST00000557159 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
APEX1-216ENST00000557159 M0QZ58 72 aa6.24□□□□□ -1.41
APEX1-216ENST00000557159 RNF213Q63HN8 5207 aa6.21□□□□□ -1.41
APEX1-216ENST00000557159 LRP2P98164 4655 aa6.16□□□□□ -1.42
APEX1-216ENST00000557159 LPAP08519 4548 aa6.16□□□□□ -1.42
APEX1-216ENST00000557159 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
APEX1-216ENST00000557159 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
APEX1-216ENST00000557159 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
APEX1-216ENST00000557159 MUC2Q02817 5179 aa5.91□□□□□ -1.46
APEX1-216ENST00000557159 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
APEX1-216ENST00000557159 R4GN34 69 aa5.89□□□□□ -1.47
APEX1-216ENST00000557159 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
APEX1-216ENST00000557159 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
APEX1-216ENST00000557159 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
APEX1-216ENST00000557159 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
APEX1-216ENST00000557159 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
APEX1-216ENST00000557159 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
APEX1-216ENST00000557159 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
APEX1-216ENST00000557159 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.49
APEX1-216ENST00000557159 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
APEX1-216ENST00000557159 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
APEX1-216ENST00000557159 LORP23490 312 aaPredicted RBP5.67□□□□□ -1.5
APEX1-216ENST00000557159 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
APEX1-216ENST00000557159 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
APEX1-216ENST00000557159 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
APEX1-216ENST00000557159 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
APEX1-216ENST00000557159 MT1HP80294 61 aa5.53□□□□□ -1.52
APEX1-216ENST00000557159 TNP1P09430 55 aa5.52□□□□□ -1.53
APEX1-216ENST00000557159 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
APEX1-216ENST00000557159 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
APEX1-216ENST00000557159 M0R2T5 61 aa5.43□□□□□ -1.54
APEX1-216ENST00000557159 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
APEX1-216ENST00000557159 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
APEX1-216ENST00000557159 MT2AP02795 61 aa5.23□□□□□ -1.57
APEX1-216ENST00000557159 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
APEX1-216ENST00000557159 INE1O15225 51 aa5.23□□□□□ -1.57
APEX1-216ENST00000557159 MT1FP04733 61 aa5.2□□□□□ -1.58
APEX1-216ENST00000557159 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
APEX1-216ENST00000557159 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
APEX1-216ENST00000557159 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
APEX1-216ENST00000557159 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
APEX1-216ENST00000557159 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
APEX1-216ENST00000557159 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
APEX1-216ENST00000557159 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
APEX1-216ENST00000557159 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
APEX1-216ENST00000557159 LCE2BO14633 110 aa5.02□□□□□ -1.61
APEX1-216ENST00000557159 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
APEX1-216ENST00000557159 MACF1Q9UPN3 7388 aaKnown RBP5□□□□□ -1.61
APEX1-216ENST00000557159 USH2AO75445 5202 aa4.97□□□□□ -1.61
APEX1-216ENST00000557159 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
APEX1-216ENST00000557159 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
APEX1-216ENST00000557159 MT1BP07438 61 aa4.88□□□□□ -1.63
APEX1-216ENST00000557159 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
APEX1-216ENST00000557159 NEBP20929 6669 aa4.87□□□□□ -1.63
APEX1-216ENST00000557159 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
APEX1-216ENST00000557159 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
APEX1-216ENST00000557159 MT1XP80297 61 aa4.83□□□□□ -1.64
APEX1-216ENST00000557159 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
APEX1-216ENST00000557159 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
APEX1-216ENST00000557159 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms