RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
HNRNPC-228ENST00000557033 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
HNRNPC-228ENST00000557033 A6NED7 52 aa4.77□□□□□ -1.65
HNRNPC-228ENST00000557033 TAX1BP3O14907 124 aa4.77□□□□□ -1.65
HNRNPC-228ENST00000557033 MT1FP04733 61 aa4.77□□□□□ -1.65
HNRNPC-228ENST00000557033 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
HNRNPC-228ENST00000557033 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
HNRNPC-228ENST00000557033 hDV103S1A0JD37 113 aa4.75□□□□□ -1.65
HNRNPC-228ENST00000557033 LOC105371267A0A1B0GV96 52 aa4.74□□□□□ -1.65
HNRNPC-228ENST00000557033 K7EQZ3 153 aa4.74□□□□□ -1.65
HNRNPC-228ENST00000557033 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
HNRNPC-228ENST00000557033 A8MUN3 132 aa4.7□□□□□ -1.66
HNRNPC-228ENST00000557033 SPCS1Q9Y6A9 102 aa4.7□□□□□ -1.66
HNRNPC-228ENST00000557033 H1FX-AS1Q4G0G2 97 aa4.69□□□□□ -1.66
HNRNPC-228ENST00000557033 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
HNRNPC-228ENST00000557033 C7orf65Q6ZTY9 151 aa4.67□□□□□ -1.66
HNRNPC-228ENST00000557033 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
HNRNPC-228ENST00000557033 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
HNRNPC-228ENST00000557033 HCG22E2RYF7 251 aa4.65□□□□□ -1.67
HNRNPC-228ENST00000557033 COL5A1-AS1Q5SY13 56 aa4.65□□□□□ -1.67
HNRNPC-228ENST00000557033 UBL5Q9BZL1 73 aa4.65□□□□□ -1.67
HNRNPC-228ENST00000557033 LINC00846Q9NV44 126 aa4.64□□□□□ -1.67
HNRNPC-228ENST00000557033 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
HNRNPC-228ENST00000557033 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
HNRNPC-228ENST00000557033 K7EP34 96 aa4.61□□□□□ -1.67
HNRNPC-228ENST00000557033 SMIM20Q8N5G0 67 aa4.61□□□□□ -1.67
HNRNPC-228ENST00000557033 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
HNRNPC-228ENST00000557033 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
HNRNPC-228ENST00000557033 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
HNRNPC-228ENST00000557033 F8W1H4 67 aa4.57□□□□□ -1.68
HNRNPC-228ENST00000557033 GTF2H5Q6ZYL4 71 aa4.57□□□□□ -1.68
HNRNPC-228ENST00000557033 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
HNRNPC-228ENST00000557033 A0A1B0GU33 70 aa4.56□□□□□ -1.68
HNRNPC-228ENST00000557033 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
HNRNPC-228ENST00000557033 C1orf64Q8NEQ6 169 aa4.52□□□□□ -1.69
HNRNPC-228ENST00000557033 ETDBQ3ZM63 59 aa4.51□□□□□ -1.69
HNRNPC-228ENST00000557033 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
HNRNPC-228ENST00000557033 S4R3F8 94 aa4.5□□□□□ -1.69
HNRNPC-228ENST00000557033 R4GN34 69 aa4.49□□□□□ -1.69
HNRNPC-228ENST00000557033 ACYP1P07311 99 aa4.47□□□□□ -1.69
HNRNPC-228ENST00000557033 LCA10Q71F78 164 aa4.47□□□□□ -1.69
HNRNPC-228ENST00000557033 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.7
HNRNPC-228ENST00000557033 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.7
HNRNPC-228ENST00000557033 CYP4F30PQ9H0H9 118 aa4.45□□□□□ -1.7
HNRNPC-228ENST00000557033 TRAV22A0A0B4J277 110 aa4.42□□□□□ -1.7
HNRNPC-228ENST00000557033 LOC101927531A0A1B0GV80 90 aa4.42□□□□□ -1.7
HNRNPC-228ENST00000557033 ATP5EP2Q5VTU8 51 aa4.41□□□□□ -1.7
HNRNPC-228ENST00000557033 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
HNRNPC-228ENST00000557033 H3BPC8 53 aa4.4□□□□□ -1.71
HNRNPC-228ENST00000557033 HIST1H4AP62805 103 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-228ENST00000557033 Q5VV11 94 aa4.4□□□□□ -1.71
HNRNPC-228ENST00000557033 UQCRQO14949 82 aa4.39□□□□□ -1.71
HNRNPC-228ENST00000557033 KLKP1Q107X0 134 aa4.39□□□□□ -1.71
HNRNPC-228ENST00000557033 KRTAP19-8Q3LI54 63 aa4.39□□□□□ -1.71
HNRNPC-228ENST00000557033 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
HNRNPC-228ENST00000557033 MT1BP07438 61 aa4.38□□□□□ -1.71
HNRNPC-228ENST00000557033 ATOX1O00244 68 aa4.37□□□□□ -1.71
HNRNPC-228ENST00000557033 CRIPTQ9P021 101 aa4.37□□□□□ -1.71
HNRNPC-228ENST00000557033 A6NN06 94 aa4.36□□□□□ -1.71
HNRNPC-228ENST00000557033 A0A087WVE0 104 aa4.34□□□□□ -1.71
HNRNPC-228ENST00000557033 H0Y9P7 68 aa4.34□□□□□ -1.71
HNRNPC-228ENST00000557033 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
HNRNPC-228ENST00000557033 IMUPQ9GZP8 106 aa4.34□□□□□ -1.71
HNRNPC-228ENST00000557033 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
HNRNPC-228ENST00000557033 NDUFC1O43677 76 aa4.32□□□□□ -1.72
HNRNPC-228ENST00000557033 H0YAA0 97 aa4.31□□□□□ -1.72
HNRNPC-228ENST00000557033 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
HNRNPC-228ENST00000557033 LINC01554Q52M75 96 aa4.3□□□□□ -1.72
HNRNPC-228ENST00000557033 NEBP20929 6669 aa4.28□□□□□ -1.72
HNRNPC-228ENST00000557033 LINC00208Q96KT6 92 aa4.28□□□□□ -1.72
HNRNPC-228ENST00000557033 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
HNRNPC-228ENST00000557033 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
HNRNPC-228ENST00000557033 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
HNRNPC-228ENST00000557033 A0A1B0GV90 55 aa4.21□□□□□ -1.74
HNRNPC-228ENST00000557033 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
HNRNPC-228ENST00000557033 J3QR89 54 aa4.2□□□□□ -1.74
HNRNPC-228ENST00000557033 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
HNRNPC-228ENST00000557033 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
HNRNPC-228ENST00000557033 C20orf197Q8N268 126 aa4.15□□□□□ -1.75
HNRNPC-228ENST00000557033 DMAC1Q96GE9 116 aa4.15□□□□□ -1.75
HNRNPC-228ENST00000557033 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
HNRNPC-228ENST00000557033 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
HNRNPC-228ENST00000557033 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
HNRNPC-228ENST00000557033 P0C880 135 aa4.11□□□□□ -1.75
HNRNPC-228ENST00000557033 KMT2DO14686 5537 aa4.1□□□□□ -1.75
HNRNPC-228ENST00000557033 MT1XP80297 61 aa4.09□□□□□ -1.75
HNRNPC-228ENST00000557033 M0QZ58 72 aa4.08□□□□□ -1.76
HNRNPC-228ENST00000557033 TMEM258P61165 79 aa4.08□□□□□ -1.76
HNRNPC-228ENST00000557033 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
HNRNPC-228ENST00000557033 ACYP2P14621 99 aa4.07□□□□□ -1.76
HNRNPC-228ENST00000557033 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
HNRNPC-228ENST00000557033 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
HNRNPC-228ENST00000557033 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
HNRNPC-228ENST00000557033 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
HNRNPC-228ENST00000557033 K7ERU9 68 aa4.01□□□□□ -1.77
HNRNPC-228ENST00000557033 MT-ATP8P03928 68 aa4.01□□□□□ -1.77
HNRNPC-228ENST00000557033 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
HNRNPC-228ENST00000557033 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
HNRNPC-228ENST00000557033 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
HNRNPC-228ENST00000557033 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms