RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 LINC00313P59037 77 aa3.66□□□□□ -1.82
LINC00871-204ENST00000556886 NDUFS5O43920 106 aa3.65□□□□□ -1.83
LINC00871-204ENST00000556886 PKD1P98161 4303 aa3.65□□□□□ -1.83
LINC00871-204ENST00000556886 FP248Q71RG6 208 aaPredicted RBP3.64□□□□□ -1.83
LINC00871-204ENST00000556886 V9GYY9 64 aa3.64□□□□□ -1.83
LINC00871-204ENST00000556886 Q1T7F1 81 aa3.63□□□□□ -1.83
LINC00871-204ENST00000556886 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
LINC00871-204ENST00000556886 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
LINC00871-204ENST00000556886 DYNC1H1Q14204 4646 aaKnown RBP3.61□□□□□ -1.83
LINC00871-204ENST00000556886 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
LINC00871-204ENST00000556886 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
LINC00871-204ENST00000556886 LRP1BQ9NZR2 4599 aa3.61□□□□□ -1.83
LINC00871-204ENST00000556886 SRRM2Q9UQ35 2752 aaKnown RBP3.6□□□□□ -1.83
LINC00871-204ENST00000556886 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.83
LINC00871-204ENST00000556886 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
LINC00871-204ENST00000556886 Q5W150 140 aa3.58□□□□□ -1.84
LINC00871-204ENST00000556886 COA5Q86WW8 74 aa3.57□□□□□ -1.84
LINC00871-204ENST00000556886 ACYP2P14621 99 aa3.56□□□□□ -1.84
LINC00871-204ENST00000556886 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
LINC00871-204ENST00000556886 SMR3BP02814 79 aaPredicted RBP3.55□□□□□ -1.84
LINC00871-204ENST00000556886 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
LINC00871-204ENST00000556886 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
LINC00871-204ENST00000556886 FAT1Q14517 4588 aa3.53□□□□□ -1.84
LINC00871-204ENST00000556886 HRES1P13985 223 aa3.53□□□□□ -1.84
LINC00871-204ENST00000556886 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
LINC00871-204ENST00000556886 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
LINC00871-204ENST00000556886 HSPG2P98160 4391 aa3.53□□□□□ -1.84
LINC00871-204ENST00000556886 BIRC6Q9NR09 4857 aa3.53□□□□□ -1.84
LINC00871-204ENST00000556886 A8MUU9 505 aa3.52□□□□□ -1.85
LINC00871-204ENST00000556886 C20orf166-AS1Q96NR2 134 aa3.52□□□□□ -1.85
LINC00871-204ENST00000556886 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
LINC00871-204ENST00000556886 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
LINC00871-204ENST00000556886 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
LINC00871-204ENST00000556886 A8MUN3 132 aa3.5□□□□□ -1.85
LINC00871-204ENST00000556886 C7orf65Q6ZTY9 151 aa3.5□□□□□ -1.85
LINC00871-204ENST00000556886 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
LINC00871-204ENST00000556886 RYR1P21817 5038 aa3.48□□□□□ -1.85
LINC00871-204ENST00000556886 Q5VSD8 79 aa3.48□□□□□ -1.85
LINC00871-204ENST00000556886 Q5VV11 94 aa3.48□□□□□ -1.85
LINC00871-204ENST00000556886 CHKB-CPT1BH3BT56 60 aa3.47□□□□□ -1.85
LINC00871-204ENST00000556886 PSPHP1O15172 72 aa3.47□□□□□ -1.85
LINC00871-204ENST00000556886 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
LINC00871-204ENST00000556886 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
LINC00871-204ENST00000556886 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
LINC00871-204ENST00000556886 HERC2O95714 4834 aa3.44□□□□□ -1.86
LINC00871-204ENST00000556886 PKHD1L1Q86WI1 4243 aa3.43□□□□□ -1.86
LINC00871-204ENST00000556886 SPTSSBQ8NFR3 76 aa3.43□□□□□ -1.86
LINC00871-204ENST00000556886 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
LINC00871-204ENST00000556886 A6NED7 52 aa3.4□□□□□ -1.87
LINC00871-204ENST00000556886 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
LINC00871-204ENST00000556886 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
LINC00871-204ENST00000556886 DMBT1Q9UGM3 2413 aaPredicted RBP3.39□□□□□ -1.87
LINC00871-204ENST00000556886 SPINK7P58062 85 aa3.39□□□□□ -1.87
LINC00871-204ENST00000556886 ATP11AUNQ6ZP68 121 aa3.39□□□□□ -1.87
LINC00871-204ENST00000556886 A0A1B0GU69 56 aa3.38□□□□□ -1.87
LINC00871-204ENST00000556886 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
LINC00871-204ENST00000556886 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
LINC00871-204ENST00000556886 COX6B2Q6YFQ2 88 aa3.37□□□□□ -1.87
LINC00871-204ENST00000556886 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
LINC00871-204ENST00000556886 LCA10Q71F78 164 aa3.36□□□□□ -1.87
LINC00871-204ENST00000556886 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
LINC00871-204ENST00000556886 SEC61GP60059 68 aa3.35□□□□□ -1.87
LINC00871-204ENST00000556886 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
LINC00871-204ENST00000556886 UQCR11O14957 56 aa3.34□□□□□ -1.87
LINC00871-204ENST00000556886 MYCBP2O75592 4640 aa3.34□□□□□ -1.88
LINC00871-204ENST00000556886 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
LINC00871-204ENST00000556886 FAT3Q8TDW7 4589 aa3.33□□□□□ -1.88
LINC00871-204ENST00000556886 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
LINC00871-204ENST00000556886 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
LINC00871-204ENST00000556886 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
LINC00871-204ENST00000556886 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
LINC00871-204ENST00000556886 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
LINC00871-204ENST00000556886 TNXBP22105 4242 aa3.3□□□□□ -1.88
LINC00871-204ENST00000556886 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
LINC00871-204ENST00000556886 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
LINC00871-204ENST00000556886 A6NN06 94 aa3.27□□□□□ -1.89
LINC00871-204ENST00000556886 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
LINC00871-204ENST00000556886 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
LINC00871-204ENST00000556886 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
LINC00871-204ENST00000556886 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
LINC00871-204ENST00000556886 A0A1B0GU33 70 aa3.23□□□□□ -1.89
LINC00871-204ENST00000556886 RBM12B-AS1Q9P1G2 102 aa3.23□□□□□ -1.89
LINC00871-204ENST00000556886 S4R3F8 94 aa3.22□□□□□ -1.89
LINC00871-204ENST00000556886 HERC1Q15751 4861 aa3.22□□□□□ -1.89
LINC00871-204ENST00000556886 H0YAA0 97 aa3.17□□□□□ -1.9
LINC00871-204ENST00000556886 K7ERS5 55 aa3.16□□□□□ -1.9
LINC00871-204ENST00000556886 CSAG1Q6PB30 78 aa3.16□□□□□ -1.9
LINC00871-204ENST00000556886 LPAP08519 4548 aa3.14□□□□□ -1.91
LINC00871-204ENST00000556886 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
LINC00871-204ENST00000556886 M0QZ58 72 aa3.11□□□□□ -1.91
LINC00871-204ENST00000556886 LRP2P98164 4655 aa3.1□□□□□ -1.91
LINC00871-204ENST00000556886 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
LINC00871-204ENST00000556886 P0C880 135 aa3.07□□□□□ -1.92
LINC00871-204ENST00000556886 KRTAP13-4Q3LI77 160 aa3.05□□□□□ -1.92
LINC00871-204ENST00000556886 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
LINC00871-204ENST00000556886 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
LINC00871-204ENST00000556886 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
LINC00871-204ENST00000556886 KRTAP4-1Q9BYQ7 146 aa3.03□□□□□ -1.92
LINC00871-204ENST00000556886 ROMO1P60602 79 aa3.02□□□□□ -1.93
LINC00871-204ENST00000556886 A0A0D9SG42 100 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms