RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
SCFD1-222ENST00000556768 LINC00846Q9NV44 126 aa3.53□□□□□ -1.84
SCFD1-222ENST00000556768 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
SCFD1-222ENST00000556768 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
SCFD1-222ENST00000556768 F8W1H4 67 aa3.51□□□□□ -1.85
SCFD1-222ENST00000556768 Q5W150 140 aa3.51□□□□□ -1.85
SCFD1-222ENST00000556768 TP53AIP1Q9HCN2 124 aa3.5□□□□□ -1.85
SCFD1-222ENST00000556768 PRO0461Q9UI25 63 aa3.5□□□□□ -1.85
SCFD1-222ENST00000556768 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
SCFD1-222ENST00000556768 MT3P25713 68 aa3.49□□□□□ -1.85
SCFD1-222ENST00000556768 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-222ENST00000556768 PSPHP1O15172 72 aa3.47□□□□□ -1.85
SCFD1-222ENST00000556768 ETDBQ3ZM63 59 aa3.47□□□□□ -1.85
SCFD1-222ENST00000556768 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-222ENST00000556768 FAM236AA0A1B0GUQ0 79 aa3.44□□□□□ -1.86
SCFD1-222ENST00000556768 FAM236BA0A1B0GV22 79 aa3.44□□□□□ -1.86
SCFD1-222ENST00000556768 ACYP1P07311 99 aa3.44□□□□□ -1.86
SCFD1-222ENST00000556768 CSAG1Q6PB30 78 aa3.44□□□□□ -1.86
SCFD1-222ENST00000556768 C1orf64Q8NEQ6 169 aa3.44□□□□□ -1.86
SCFD1-222ENST00000556768 S4R3F8 94 aa3.43□□□□□ -1.86
SCFD1-222ENST00000556768 PRO0628Q9UI54 55 aa3.4□□□□□ -1.86
SCFD1-222ENST00000556768 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
SCFD1-222ENST00000556768 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
SCFD1-222ENST00000556768 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
SCFD1-222ENST00000556768 TRAV22A0A0B4J277 110 aa3.39□□□□□ -1.87
SCFD1-222ENST00000556768 CYP4F30PQ9H0H9 118 aa3.39□□□□□ -1.87
SCFD1-222ENST00000556768 LOC101927531A0A1B0GV80 90 aa3.38□□□□□ -1.87
SCFD1-222ENST00000556768 LCA10Q71F78 164 aa3.38□□□□□ -1.87
SCFD1-222ENST00000556768 ATOX1O00244 68 aa3.37□□□□□ -1.87
SCFD1-222ENST00000556768 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
SCFD1-222ENST00000556768 UQCRQO14949 82 aa3.36□□□□□ -1.87
SCFD1-222ENST00000556768 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
SCFD1-222ENST00000556768 H0Y9P7 68 aa3.33□□□□□ -1.88
SCFD1-222ENST00000556768 LINC00643Q86TS7 51 aa3.33□□□□□ -1.88
SCFD1-222ENST00000556768 NDUFC1O43677 76 aa3.33□□□□□ -1.88
SCFD1-222ENST00000556768 Q5VV11 94 aa3.33□□□□□ -1.88
SCFD1-222ENST00000556768 KLKP1Q107X0 134 aa3.32□□□□□ -1.88
SCFD1-222ENST00000556768 MP68P56378 58 aa3.31□□□□□ -1.88
SCFD1-222ENST00000556768 IMUPQ9GZP8 106 aa3.31□□□□□ -1.88
SCFD1-222ENST00000556768 CRIPTQ9P021 101 aa3.31□□□□□ -1.88
SCFD1-222ENST00000556768 A8MUN3 132 aa3.3□□□□□ -1.88
SCFD1-222ENST00000556768 A6NN06 94 aa3.3□□□□□ -1.88
SCFD1-222ENST00000556768 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
SCFD1-222ENST00000556768 A0A087WVE0 104 aa3.29□□□□□ -1.88
SCFD1-222ENST00000556768 J3QR89 54 aa3.29□□□□□ -1.88
SCFD1-222ENST00000556768 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
SCFD1-222ENST00000556768 SCGB1A1P11684 91 aa3.26□□□□□ -1.89
SCFD1-222ENST00000556768 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
SCFD1-222ENST00000556768 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SCFD1-222ENST00000556768 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
SCFD1-222ENST00000556768 H0YAA0 97 aa3.25□□□□□ -1.89
SCFD1-222ENST00000556768 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
SCFD1-222ENST00000556768 ANAPC13Q9BS18 74 aa3.25□□□□□ -1.89
SCFD1-222ENST00000556768 A0A1B0GV90 55 aa3.24□□□□□ -1.89
SCFD1-222ENST00000556768 MT1BP07438 61 aa3.24□□□□□ -1.89
SCFD1-222ENST00000556768 H3BPC8 53 aa3.23□□□□□ -1.89
SCFD1-222ENST00000556768 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
SCFD1-222ENST00000556768 ADM2Q7Z4H4 148 aa3.22□□□□□ -1.89
SCFD1-222ENST00000556768 C20orf197Q8N268 126 aa3.21□□□□□ -1.9
SCFD1-222ENST00000556768 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
SCFD1-222ENST00000556768 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SCFD1-222ENST00000556768 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
SCFD1-222ENST00000556768 R4GN34 69 aa3.19□□□□□ -1.9
SCFD1-222ENST00000556768 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
SCFD1-222ENST00000556768 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
SCFD1-222ENST00000556768 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
SCFD1-222ENST00000556768 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
SCFD1-222ENST00000556768 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
SCFD1-222ENST00000556768 SMIM20Q8N5G0 67 aa3.15□□□□□ -1.91
SCFD1-222ENST00000556768 K7ERU9 68 aa3.14□□□□□ -1.91
SCFD1-222ENST00000556768 ACYP2P14621 99 aa3.14□□□□□ -1.91
SCFD1-222ENST00000556768 SPTSSBQ8NFR3 76 aa3.14□□□□□ -1.91
SCFD1-222ENST00000556768 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
SCFD1-222ENST00000556768 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
SCFD1-222ENST00000556768 M0QZ58 72 aa3.12□□□□□ -1.91
SCFD1-222ENST00000556768 KMT2DO14686 5537 aa3.11□□□□□ -1.91
SCFD1-222ENST00000556768 P0C880 135 aa3.11□□□□□ -1.91
SCFD1-222ENST00000556768 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
SCFD1-222ENST00000556768 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
SCFD1-222ENST00000556768 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
SCFD1-222ENST00000556768 NEBP20929 6669 aa3.08□□□□□ -1.92
SCFD1-222ENST00000556768 K7ERS5 55 aa3.07□□□□□ -1.92
SCFD1-222ENST00000556768 A8MU10 97 aa3.05□□□□□ -1.92
SCFD1-222ENST00000556768 MT1XP80297 61 aa3.05□□□□□ -1.92
SCFD1-222ENST00000556768 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
SCFD1-222ENST00000556768 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
SCFD1-222ENST00000556768 SNURFQ9Y675 71 aa3.03□□□□□ -1.92
SCFD1-222ENST00000556768 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.93
SCFD1-222ENST00000556768 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
SCFD1-222ENST00000556768 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
SCFD1-222ENST00000556768 KRTAP12-2P59991 146 aa3□□□□□ -1.93
SCFD1-222ENST00000556768 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
SCFD1-222ENST00000556768 SERP2Q8N6R1 65 aa3□□□□□ -1.93
SCFD1-222ENST00000556768 A6NED7 52 aa2.99□□□□□ -1.93
SCFD1-222ENST00000556768 SPRR2EP22531 72 aa2.97□□□□□ -1.93
SCFD1-222ENST00000556768 SPRR2BP35325 72 aa2.97□□□□□ -1.93
SCFD1-222ENST00000556768 SPRR2AP35326 72 aa2.97□□□□□ -1.93
SCFD1-222ENST00000556768 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
SCFD1-222ENST00000556768 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
SCFD1-222ENST00000556768 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms