RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DMAC1Q96GE9 116 aa9.78□□□□□ -0.84
SDR39U1-220ENST00000556548 SPATA8Q6RVD6 105 aa9.77□□□□□ -0.85
SDR39U1-220ENST00000556548 ACYP2P14621 99 aa9.77□□□□□ -0.85
SDR39U1-220ENST00000556548 XP32Q5T750 250 aa9.74□□□□□ -0.85
SDR39U1-220ENST00000556548 A0A1B0GU69 56 aa9.72□□□□□ -0.85
SDR39U1-220ENST00000556548 BIRC6Q9NR09 4857 aa9.71□□□□□ -0.86
SDR39U1-220ENST00000556548 HERC2O95714 4834 aa9.69□□□□□ -0.86
SDR39U1-220ENST00000556548 RPL37P61927 97 aaKnown RBP9.68□□□□□ -0.86
SDR39U1-220ENST00000556548 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
SDR39U1-220ENST00000556548 CSAG1Q6PB30 78 aa9.67□□□□□ -0.86
SDR39U1-220ENST00000556548 LPAP08519 4548 aa9.65□□□□□ -0.86
SDR39U1-220ENST00000556548 UQCR11O14957 56 aa9.65□□□□□ -0.87
SDR39U1-220ENST00000556548 J3QL48 77 aa9.61□□□□□ -0.87
SDR39U1-220ENST00000556548 LRP2P98164 4655 aa9.6□□□□□ -0.87
SDR39U1-220ENST00000556548 KRTAP3-1Q9BYR8 98 aa9.57□□□□□ -0.88
SDR39U1-220ENST00000556548 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
SDR39U1-220ENST00000556548 COX6B2Q6YFQ2 88 aa9.47□□□□□ -0.89
SDR39U1-220ENST00000556548 PCLOQ9Y6V0 5065 aa9.38□□□□□ -0.91
SDR39U1-220ENST00000556548 ROMO1P60602 79 aa9.37□□□□□ -0.91
SDR39U1-220ENST00000556548 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
SDR39U1-220ENST00000556548 HERC1Q15751 4861 aa9.3□□□□□ -0.92
SDR39U1-220ENST00000556548 SEC61BP60468 96 aaKnown RBP9.23□□□□□ -0.93
SDR39U1-220ENST00000556548 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
SDR39U1-220ENST00000556548 S4R3F8 94 aa9.2□□□□□ -0.94
SDR39U1-220ENST00000556548 H1FX-AS1Q4G0G2 97 aa9.17□□□□□ -0.94
SDR39U1-220ENST00000556548 KRTAP4-1Q9BYQ7 146 aa9.16□□□□□ -0.94
SDR39U1-220ENST00000556548 MUC17Q685J3 4493 aa9.15□□□□□ -0.94
SDR39U1-220ENST00000556548 H0YAA0 97 aa9.14□□□□□ -0.95
SDR39U1-220ENST00000556548 HMCN2Q8NDA2 5059 aa9.1□□□□□ -0.95
SDR39U1-220ENST00000556548 MUC2Q02817 5179 aa9.09□□□□□ -0.95
SDR39U1-220ENST00000556548 P0C880 135 aa9.08□□□□□ -0.96
SDR39U1-220ENST00000556548 A0A1B0GU33 70 aa9□□□□□ -0.97
SDR39U1-220ENST00000556548 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
SDR39U1-220ENST00000556548 K7ERS5 55 aa8.94□□□□□ -0.98
SDR39U1-220ENST00000556548 KRTAP10-6P60371 365 aaPredicted RBP8.93□□□□□ -0.98
SDR39U1-220ENST00000556548 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
SDR39U1-220ENST00000556548 KRTAP19-2Q3LHN2 52 aa8.87□□□□□ -0.99
SDR39U1-220ENST00000556548 SPINT4Q6UDR6 99 aa8.82□□□□□ -1
SDR39U1-220ENST00000556548 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
SDR39U1-220ENST00000556548 UBR4Q5T4S7 5183 aa8.76□□□□□ -1.01
SDR39U1-220ENST00000556548 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
SDR39U1-220ENST00000556548 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
SDR39U1-220ENST00000556548 A0A0D9SG42 100 aa8.71□□□□□ -1.01
SDR39U1-220ENST00000556548 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
SDR39U1-220ENST00000556548 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
SDR39U1-220ENST00000556548 FAT4Q6V0I7 4981 aa8.66□□□□□ -1.02
SDR39U1-220ENST00000556548 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
SDR39U1-220ENST00000556548 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
SDR39U1-220ENST00000556548 M0QZ58 72 aa8.53□□□□□ -1.04
SDR39U1-220ENST00000556548 A0A0A0MQY5 61 aa8.52□□□□□ -1.05
SDR39U1-220ENST00000556548 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
SDR39U1-220ENST00000556548 R4GN34 69 aa8.51□□□□□ -1.05
SDR39U1-220ENST00000556548 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
SDR39U1-220ENST00000556548 M0R2T5 61 aa8.42□□□□□ -1.06
SDR39U1-220ENST00000556548 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
SDR39U1-220ENST00000556548 MT1HP80294 61 aa8.4□□□□□ -1.07
SDR39U1-220ENST00000556548 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
SDR39U1-220ENST00000556548 MT2AP02795 61 aa8.13□□□□□ -1.11
SDR39U1-220ENST00000556548 MT1FP04733 61 aa8.12□□□□□ -1.11
SDR39U1-220ENST00000556548 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
SDR39U1-220ENST00000556548 KRTAP9-8Q9BYQ0 159 aa8.12□□□□□ -1.11
SDR39U1-220ENST00000556548 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
SDR39U1-220ENST00000556548 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
SDR39U1-220ENST00000556548 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
SDR39U1-220ENST00000556548 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
SDR39U1-220ENST00000556548 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
SDR39U1-220ENST00000556548 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
SDR39U1-220ENST00000556548 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
SDR39U1-220ENST00000556548 MT1BP07438 61 aa7.7□□□□□ -1.18
SDR39U1-220ENST00000556548 TNP1P09430 55 aa7.61□□□□□ -1.19
SDR39U1-220ENST00000556548 LCE2BO14633 110 aa7.6□□□□□ -1.19
SDR39U1-220ENST00000556548 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
SDR39U1-220ENST00000556548 USH2AO75445 5202 aa7.54□□□□□ -1.2
SDR39U1-220ENST00000556548 KRTAP10-5P60370 271 aa7.52□□□□□ -1.2
SDR39U1-220ENST00000556548 MT1XP80297 61 aa7.52□□□□□ -1.2
SDR39U1-220ENST00000556548 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
SDR39U1-220ENST00000556548 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
SDR39U1-220ENST00000556548 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
SDR39U1-220ENST00000556548 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
SDR39U1-220ENST00000556548 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
SDR39U1-220ENST00000556548 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
SDR39U1-220ENST00000556548 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
SDR39U1-220ENST00000556548 SSPOA2VEC9 5147 aa7.15□□□□□ -1.27
SDR39U1-220ENST00000556548 KMT2DO14686 5537 aa7.12□□□□□ -1.27
SDR39U1-220ENST00000556548 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
SDR39U1-220ENST00000556548 INE1O15225 51 aa7.02□□□□□ -1.28
SDR39U1-220ENST00000556548 KRTAP4-8A0A0G2JLE6 195 aa7□□□□□ -1.29
SDR39U1-220ENST00000556548 KRTAP4-8Q9BYQ9 185 aa7□□□□□ -1.29
SDR39U1-220ENST00000556548 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
SDR39U1-220ENST00000556548 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
SDR39U1-220ENST00000556548 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
SDR39U1-220ENST00000556548 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.31
SDR39U1-220ENST00000556548 FCGBPQ9Y6R7 5405 aaPredicted RBP6.78□□□□□ -1.32
SDR39U1-220ENST00000556548 KRTAP19-7Q3SYF9 63 aa6.71□□□□□ -1.34
SDR39U1-220ENST00000556548 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
SDR39U1-220ENST00000556548 MT1EP04732 61 aa6.55□□□□□ -1.36
SDR39U1-220ENST00000556548 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
SDR39U1-220ENST00000556548 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
SDR39U1-220ENST00000556548 MT1LQ93083 61 aa6.47□□□□□ -1.37
SDR39U1-220ENST00000556548 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms