RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
GPHN-213ENST00000556501 LCA10Q71F78 164 aa2.97□□□□□ -1.93
GPHN-213ENST00000556501 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
GPHN-213ENST00000556501 A8MUU9 505 aa2.96□□□□□ -1.94
GPHN-213ENST00000556501 SPINK7P58062 85 aa2.96□□□□□ -1.94
GPHN-213ENST00000556501 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
GPHN-213ENST00000556501 ATP11AUNQ6ZP68 121 aa2.95□□□□□ -1.94
GPHN-213ENST00000556501 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
GPHN-213ENST00000556501 VPS13BQ7Z7G8 4022 aa2.94□□□□□ -1.94
GPHN-213ENST00000556501 RYR3Q15413 4870 aa2.93□□□□□ -1.94
GPHN-213ENST00000556501 DYNC1H1Q14204 4646 aaKnown RBP2.92□□□□□ -1.94
GPHN-213ENST00000556501 A0A1B0GU69 56 aa2.92□□□□□ -1.94
GPHN-213ENST00000556501 C9orf92A6NGG3 77 aa2.92□□□□□ -1.94
GPHN-213ENST00000556501 A6NN06 94 aa2.92□□□□□ -1.94
GPHN-213ENST00000556501 SEC61GP60059 68 aa2.92□□□□□ -1.94
GPHN-213ENST00000556501 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
GPHN-213ENST00000556501 SPTSSBQ8NFR3 76 aa2.92□□□□□ -1.94
GPHN-213ENST00000556501 FLG2Q5D862 2391 aaPredicted RBP2.91□□□□□ -1.94
GPHN-213ENST00000556501 PKHD1L1Q86WI1 4243 aa2.91□□□□□ -1.94
GPHN-213ENST00000556501 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
GPHN-213ENST00000556501 KRTAP10-8P60410 259 aa2.88□□□□□ -1.95
GPHN-213ENST00000556501 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
GPHN-213ENST00000556501 SPATA8Q6RVD6 105 aa2.88□□□□□ -1.95
GPHN-213ENST00000556501 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
GPHN-213ENST00000556501 UQCR11O14957 56 aa2.87□□□□□ -1.95
GPHN-213ENST00000556501 Q5VSD8 79 aa2.87□□□□□ -1.95
GPHN-213ENST00000556501 KRTAP9-8Q9BYQ0 159 aa2.87□□□□□ -1.95
GPHN-213ENST00000556501 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
GPHN-213ENST00000556501 COX6B2Q6YFQ2 88 aa2.85□□□□□ -1.95
GPHN-213ENST00000556501 PRAC1Q96KF2 57 aa2.84□□□□□ -1.95
GPHN-213ENST00000556501 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
GPHN-213ENST00000556501 RPL37P61927 97 aaKnown RBP2.83□□□□□ -1.96
GPHN-213ENST00000556501 KIAA1109Q2LD37 5005 aa2.82□□□□□ -1.96
GPHN-213ENST00000556501 FAT1Q14517 4588 aa2.81□□□□□ -1.96
GPHN-213ENST00000556501 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
GPHN-213ENST00000556501 H0YAA0 97 aa2.79□□□□□ -1.96
GPHN-213ENST00000556501 HSPG2P98160 4391 aa2.79□□□□□ -1.96
GPHN-213ENST00000556501 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
GPHN-213ENST00000556501 RBM12B-AS1Q9P1G2 102 aa2.78□□□□□ -1.96
GPHN-213ENST00000556501 TNXBP22105 4242 aa2.78□□□□□ -1.96
GPHN-213ENST00000556501 A0A1B0GU33 70 aa2.77□□□□□ -1.97
GPHN-213ENST00000556501 RYR1P21817 5038 aa2.77□□□□□ -1.97
GPHN-213ENST00000556501 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
GPHN-213ENST00000556501 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
GPHN-213ENST00000556501 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
GPHN-213ENST00000556501 S4R3F8 94 aa2.74□□□□□ -1.97
GPHN-213ENST00000556501 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
GPHN-213ENST00000556501 LRP1Q07954 4544 aaKnown RBP2.73□□□□□ -1.97
GPHN-213ENST00000556501 KRTAP10-6P60371 365 aaPredicted RBP2.72□□□□□ -1.97
GPHN-213ENST00000556501 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
GPHN-213ENST00000556501 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
GPHN-213ENST00000556501 HERC2O95714 4834 aa2.69□□□□□ -1.98
GPHN-213ENST00000556501 K7ERS5 55 aa2.68□□□□□ -1.98
GPHN-213ENST00000556501 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
GPHN-213ENST00000556501 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
GPHN-213ENST00000556501 CSAG1Q6PB30 78 aa2.67□□□□□ -1.98
GPHN-213ENST00000556501 P0C880 135 aa2.66□□□□□ -1.98
GPHN-213ENST00000556501 LINC01554Q52M75 96 aa2.65□□□□□ -1.99
GPHN-213ENST00000556501 A0A0D9SG42 100 aa2.63□□□□□ -1.99
GPHN-213ENST00000556501 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
GPHN-213ENST00000556501 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
GPHN-213ENST00000556501 ROMO1P60602 79 aa2.62□□□□□ -1.99
GPHN-213ENST00000556501 M0QZ58 72 aa2.6□□□□□ -1.99
GPHN-213ENST00000556501 KRTAP12-1P59990 96 aa2.58□□□□□ -2
GPHN-213ENST00000556501 KRTAP12-2P59991 146 aa2.58□□□□□ -2
GPHN-213ENST00000556501 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
GPHN-213ENST00000556501 NDUFAF8A1L188 74 aa2.56□□□□□ -2
GPHN-213ENST00000556501 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
GPHN-213ENST00000556501 LRP2P98164 4655 aa2.55□□□□□ -2
GPHN-213ENST00000556501 HERC1Q15751 4861 aa2.54□□□□□ -2
GPHN-213ENST00000556501 CRIPTQ9P021 101 aa2.54□□□□□ -2
GPHN-213ENST00000556501 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
GPHN-213ENST00000556501 R4GN34 69 aa2.52□□□□□ -2.01
GPHN-213ENST00000556501 LPAP08519 4548 aa2.5□□□□□ -2.01
GPHN-213ENST00000556501 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
GPHN-213ENST00000556501 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
GPHN-213ENST00000556501 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
GPHN-213ENST00000556501 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
GPHN-213ENST00000556501 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.02
GPHN-213ENST00000556501 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
GPHN-213ENST00000556501 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
GPHN-213ENST00000556501 MUC2Q02817 5179 aa2.36□□□□□ -2.03
GPHN-213ENST00000556501 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
GPHN-213ENST00000556501 RNF213Q63HN8 5207 aa2.34□□□□□ -2.03
GPHN-213ENST00000556501 SPRR2GQ9BYE4 73 aa2.34□□□□□ -2.03
GPHN-213ENST00000556501 MT3P25713 68 aa2.33□□□□□ -2.04
GPHN-213ENST00000556501 MT1HP80294 61 aa2.33□□□□□ -2.04
GPHN-213ENST00000556501 M0R2T5 61 aa2.3□□□□□ -2.04
GPHN-213ENST00000556501 MT2AP02795 61 aa2.3□□□□□ -2.04
GPHN-213ENST00000556501 TNP1P09430 55 aa2.3□□□□□ -2.04
GPHN-213ENST00000556501 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
GPHN-213ENST00000556501 MT1FP04733 61 aa2.29□□□□□ -2.04
GPHN-213ENST00000556501 PLAC4Q8WY50 150 aa2.29□□□□□ -2.04
GPHN-213ENST00000556501 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
GPHN-213ENST00000556501 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
GPHN-213ENST00000556501 MT1BP07438 61 aa2.22□□□□□ -2.05
GPHN-213ENST00000556501 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
GPHN-213ENST00000556501 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
GPHN-213ENST00000556501 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
GPHN-213ENST00000556501 MT1XP80297 61 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms