RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CSAG1Q6PB30 78 aa6.09□□□□□ -1.43
ACTN1-219ENST00000556432 S4R3F8 94 aa6.09□□□□□ -1.43
ACTN1-219ENST00000556432 KLKP1Q107X0 134 aa6.06□□□□□ -1.44
ACTN1-219ENST00000556432 Q5W150 140 aa6.05□□□□□ -1.44
ACTN1-219ENST00000556432 CASC2Q6XLA1 102 aa6.05□□□□□ -1.44
ACTN1-219ENST00000556432 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
ACTN1-219ENST00000556432 SPRR2DP22532 72 aa6.01□□□□□ -1.45
ACTN1-219ENST00000556432 LCA10Q71F78 164 aa6.01□□□□□ -1.45
ACTN1-219ENST00000556432 CXCL6P80162 114 aa6□□□□□ -1.45
ACTN1-219ENST00000556432 LCE1AQ5T7P2 110 aa6□□□□□ -1.45
ACTN1-219ENST00000556432 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
ACTN1-219ENST00000556432 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
ACTN1-219ENST00000556432 ACYP1P07311 99 aa5.97□□□□□ -1.45
ACTN1-219ENST00000556432 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
ACTN1-219ENST00000556432 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
ACTN1-219ENST00000556432 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
ACTN1-219ENST00000556432 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
ACTN1-219ENST00000556432 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
ACTN1-219ENST00000556432 HIST1H4AP62805 103 aaKnown RBP5.9□□□□□ -1.46
ACTN1-219ENST00000556432 GPR98Q8WXG9 6306 aa5.9□□□□□ -1.47
ACTN1-219ENST00000556432 A0A087WVE0 104 aa5.89□□□□□ -1.47
ACTN1-219ENST00000556432 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
ACTN1-219ENST00000556432 LINC00643Q86TS7 51 aa5.87□□□□□ -1.47
ACTN1-219ENST00000556432 MT1XP80297 61 aa5.83□□□□□ -1.48
ACTN1-219ENST00000556432 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
ACTN1-219ENST00000556432 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
ACTN1-219ENST00000556432 J3QR89 54 aa5.81□□□□□ -1.48
ACTN1-219ENST00000556432 PCP4P48539 62 aa5.8□□□□□ -1.48
ACTN1-219ENST00000556432 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
ACTN1-219ENST00000556432 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
ACTN1-219ENST00000556432 A8MUN3 132 aa5.76□□□□□ -1.49
ACTN1-219ENST00000556432 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
ACTN1-219ENST00000556432 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
ACTN1-219ENST00000556432 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
ACTN1-219ENST00000556432 H0Y9P7 68 aa5.74□□□□□ -1.49
ACTN1-219ENST00000556432 UQCRQO14949 82 aa5.74□□□□□ -1.49
ACTN1-219ENST00000556432 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
ACTN1-219ENST00000556432 MT-ATP8P03928 68 aa5.72□□□□□ -1.49
ACTN1-219ENST00000556432 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
ACTN1-219ENST00000556432 OCR1Q9BZK8 76 aa5.71□□□□□ -1.5
ACTN1-219ENST00000556432 K7ERU9 68 aa5.69□□□□□ -1.5
ACTN1-219ENST00000556432 ATOX1O00244 68 aa5.67□□□□□ -1.5
ACTN1-219ENST00000556432 H0YAA0 97 aa5.66□□□□□ -1.5
ACTN1-219ENST00000556432 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
ACTN1-219ENST00000556432 NDUFC1O43677 76 aa5.65□□□□□ -1.5
ACTN1-219ENST00000556432 LINC00208Q96KT6 92 aa5.65□□□□□ -1.5
ACTN1-219ENST00000556432 SCGB1A1P11684 91 aa5.62□□□□□ -1.51
ACTN1-219ENST00000556432 MP68P56378 58 aa5.61□□□□□ -1.51
ACTN1-219ENST00000556432 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
ACTN1-219ENST00000556432 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
ACTN1-219ENST00000556432 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
ACTN1-219ENST00000556432 R4GN34 69 aa5.57□□□□□ -1.52
ACTN1-219ENST00000556432 H3BPC8 53 aa5.52□□□□□ -1.53
ACTN1-219ENST00000556432 M0QZ58 72 aa5.51□□□□□ -1.53
ACTN1-219ENST00000556432 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
ACTN1-219ENST00000556432 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
ACTN1-219ENST00000556432 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
ACTN1-219ENST00000556432 SMIM20Q8N5G0 67 aa5.46□□□□□ -1.54
ACTN1-219ENST00000556432 C20orf197Q8N268 126 aa5.45□□□□□ -1.54
ACTN1-219ENST00000556432 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
ACTN1-219ENST00000556432 P0C880 135 aa5.44□□□□□ -1.54
ACTN1-219ENST00000556432 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
ACTN1-219ENST00000556432 SEC61GP60059 68 aa5.4□□□□□ -1.54
ACTN1-219ENST00000556432 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
ACTN1-219ENST00000556432 SERP2Q8N6R1 65 aa5.38□□□□□ -1.55
ACTN1-219ENST00000556432 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
ACTN1-219ENST00000556432 MT4P47944 62 aa5.31□□□□□ -1.56
ACTN1-219ENST00000556432 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
ACTN1-219ENST00000556432 ACYP2P14621 99 aa5.29□□□□□ -1.56
ACTN1-219ENST00000556432 COX7CP15954 63 aa5.27□□□□□ -1.57
ACTN1-219ENST00000556432 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
ACTN1-219ENST00000556432 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
ACTN1-219ENST00000556432 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
ACTN1-219ENST00000556432 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
ACTN1-219ENST00000556432 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
ACTN1-219ENST00000556432 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
ACTN1-219ENST00000556432 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
ACTN1-219ENST00000556432 KRTAP5-10Q6L8G5 202 aa5.23□□□□□ -1.57
ACTN1-219ENST00000556432 MT1EP04732 61 aa5.2□□□□□ -1.58
ACTN1-219ENST00000556432 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
ACTN1-219ENST00000556432 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
ACTN1-219ENST00000556432 H7BZZ5 65 aa5.17□□□□□ -1.58
ACTN1-219ENST00000556432 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
ACTN1-219ENST00000556432 COA5Q86WW8 74 aa5.16□□□□□ -1.58
ACTN1-219ENST00000556432 V9GYY9 64 aa5.14□□□□□ -1.59
ACTN1-219ENST00000556432 CCDC179H3BU77 68 aa5.13□□□□□ -1.59
ACTN1-219ENST00000556432 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
ACTN1-219ENST00000556432 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
ACTN1-219ENST00000556432 MT1GP13640 62 aa5.07□□□□□ -1.6
ACTN1-219ENST00000556432 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
ACTN1-219ENST00000556432 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
ACTN1-219ENST00000556432 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
ACTN1-219ENST00000556432 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
ACTN1-219ENST00000556432 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
ACTN1-219ENST00000556432 H3BS24 57 aa5.01□□□□□ -1.61
ACTN1-219ENST00000556432 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
ACTN1-219ENST00000556432 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
ACTN1-219ENST00000556432 MT1MQ8N339 61 aa4.99□□□□□ -1.61
ACTN1-219ENST00000556432 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
ACTN1-219ENST00000556432 A0A0D9SG42 100 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms