RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ZNF861PO60384 105 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 UBE2AP49459 152 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 KRTAP11-1Q8IUC1 163 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 TYMSOSQ8TAI1 123 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 A0A087WSZ3 146 aa2.3□□□□□ -2.04
ATXN3-240ENST00000556339 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
ATXN3-240ENST00000556339 LINC00472Q9H8W2 130 aa2.3□□□□□ -2.04
ATXN3-240ENST00000556339 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
ATXN3-240ENST00000556339 MOBPQ13875 183 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 CASC2Q6XLA1 102 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 ANAPC11Q9NYG5 84 aa2.29□□□□□ -2.04
ATXN3-240ENST00000556339 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
ATXN3-240ENST00000556339 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
ATXN3-240ENST00000556339 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
ATXN3-240ENST00000556339 H0Y9P7 68 aa2.27□□□□□ -2.05
ATXN3-240ENST00000556339 PRLHP81277 87 aa2.27□□□□□ -2.05
ATXN3-240ENST00000556339 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
ATXN3-240ENST00000556339 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 CD164Q04900 197 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 WFDC13Q8IUB5 93 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 RETNLBQ9BQ08 111 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 LPAP08519 4548 aa2.26□□□□□ -2.05
ATXN3-240ENST00000556339 FAT4Q6V0I7 4981 aa2.25□□□□□ -2.05
ATXN3-240ENST00000556339 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
ATXN3-240ENST00000556339 A0A1B0GVX0 72 aa2.24□□□□□ -2.05
ATXN3-240ENST00000556339 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
ATXN3-240ENST00000556339 SPAG11AQ6PDA7 123 aa2.24□□□□□ -2.05
ATXN3-240ENST00000556339 SSBP3-AS1Q7Z2R9 100 aa2.24□□□□□ -2.05
ATXN3-240ENST00000556339 C8orf17Q9NRJ1 99 aa2.24□□□□□ -2.05
ATXN3-240ENST00000556339 KRTAP13-2Q52LG2 175 aa2.23□□□□□ -2.05
ATXN3-240ENST00000556339 Q96NJ1 140 aa2.23□□□□□ -2.05
ATXN3-240ENST00000556339 MRPL34Q9BQ48 92 aaKnown RBP2.23□□□□□ -2.05
ATXN3-240ENST00000556339 DEFB116Q30KQ4 102 aa2.22□□□□□ -2.05
ATXN3-240ENST00000556339 ATP11AUNQ6ZP68 121 aa2.22□□□□□ -2.05
ATXN3-240ENST00000556339 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
ATXN3-240ENST00000556339 MUC2Q02817 5179 aa2.21□□□□□ -2.05
ATXN3-240ENST00000556339 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-240ENST00000556339 Q5VV11 94 aa2.21□□□□□ -2.06
ATXN3-240ENST00000556339 COA5Q86WW8 74 aa2.21□□□□□ -2.06
ATXN3-240ENST00000556339 A0A0G2JQZ4 141 aa2.2□□□□□ -2.06
ATXN3-240ENST00000556339 A8MUN3 132 aa2.2□□□□□ -2.06
ATXN3-240ENST00000556339 SPINK1P00995 79 aa2.2□□□□□ -2.06
ATXN3-240ENST00000556339 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
ATXN3-240ENST00000556339 IGHV6-1A0A0B4J1U7 121 aa2.19□□□□□ -2.06
ATXN3-240ENST00000556339 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
ATXN3-240ENST00000556339 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-240ENST00000556339 NDUFS5O43920 106 aa2.19□□□□□ -2.06
ATXN3-240ENST00000556339 ACYP2P14621 99 aa2.19□□□□□ -2.06
ATXN3-240ENST00000556339 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-240ENST00000556339 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
ATXN3-240ENST00000556339 A6NED7 52 aa2.17□□□□□ -2.06
ATXN3-240ENST00000556339 HRES1P13985 223 aa2.16□□□□□ -2.06
ATXN3-240ENST00000556339 LINC00313P59037 77 aa2.16□□□□□ -2.06
ATXN3-240ENST00000556339 PCOTHQ58A44 107 aa2.16□□□□□ -2.06
ATXN3-240ENST00000556339 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-240ENST00000556339 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
ATXN3-240ENST00000556339 SEC61GP60059 68 aa2.15□□□□□ -2.07
ATXN3-240ENST00000556339 RPS29P62273 56 aaKnown RBP2.15□□□□□ -2.07
ATXN3-240ENST00000556339 C9orf92A6NGG3 77 aa2.14□□□□□ -2.07
ATXN3-240ENST00000556339 LCA10Q71F78 164 aa2.14□□□□□ -2.07
ATXN3-240ENST00000556339 A6NN06 94 aa2.13□□□□□ -2.07
ATXN3-240ENST00000556339 CRCT1Q9UGL9 99 aa2.13□□□□□ -2.07
ATXN3-240ENST00000556339 Q5W150 140 aa2.12□□□□□ -2.07
ATXN3-240ENST00000556339 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
ATXN3-240ENST00000556339 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
ATXN3-240ENST00000556339 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
ATXN3-240ENST00000556339 MUC17Q685J3 4493 aa2.11□□□□□ -2.07
ATXN3-240ENST00000556339 M0R2T5 61 aa2.11□□□□□ -2.07
ATXN3-240ENST00000556339 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
ATXN3-240ENST00000556339 COX6B2Q6YFQ2 88 aa2.11□□□□□ -2.07
ATXN3-240ENST00000556339 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
ATXN3-240ENST00000556339 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
ATXN3-240ENST00000556339 A0A1B0GU69 56 aa2.1□□□□□ -2.07
ATXN3-240ENST00000556339 UQCR11O14957 56 aa2.1□□□□□ -2.07
ATXN3-240ENST00000556339 SPINK7P58062 85 aa2.09□□□□□ -2.07
ATXN3-240ENST00000556339 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ATXN3-240ENST00000556339 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
ATXN3-240ENST00000556339 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
ATXN3-240ENST00000556339 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
ATXN3-240ENST00000556339 RPL37P61927 97 aaKnown RBP2.05□□□□□ -2.08
ATXN3-240ENST00000556339 MT1HP80294 61 aa2.05□□□□□ -2.08
ATXN3-240ENST00000556339 C20orf166-AS1Q96NR2 134 aa2.05□□□□□ -2.08
ATXN3-240ENST00000556339 A8MUU9 505 aa2.04□□□□□ -2.08
ATXN3-240ENST00000556339 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
ATXN3-240ENST00000556339 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
ATXN3-240ENST00000556339 K7ERS5 55 aa2□□□□□ -2.09
ATXN3-240ENST00000556339 A0A1B0GU33 70 aa1.99□□□□□ -2.09
ATXN3-240ENST00000556339 LINC01554Q52M75 96 aa1.99□□□□□ -2.09
ATXN3-240ENST00000556339 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
ATXN3-240ENST00000556339 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
ATXN3-240ENST00000556339 H0YAA0 97 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms