RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 H3BPC8 53 aa4.59□□□□□ -1.67
VIPAS39-207ENST00000555854 H7BZZ5 65 aa4.59□□□□□ -1.67
VIPAS39-207ENST00000555854 FAM236CP0DP71 79 aa4.59□□□□□ -1.67
VIPAS39-207ENST00000555854 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.67
VIPAS39-207ENST00000555854 SERP1Q9Y6X1 66 aa4.59□□□□□ -1.67
VIPAS39-207ENST00000555854 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
VIPAS39-207ENST00000555854 NDUFB1O75438 58 aa4.58□□□□□ -1.68
VIPAS39-207ENST00000555854 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
VIPAS39-207ENST00000555854 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
VIPAS39-207ENST00000555854 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
VIPAS39-207ENST00000555854 RBM12B-AS1Q9P1G2 102 aa4.56□□□□□ -1.68
VIPAS39-207ENST00000555854 A8MWP4 228 aa4.55□□□□□ -1.68
VIPAS39-207ENST00000555854 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
VIPAS39-207ENST00000555854 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
VIPAS39-207ENST00000555854 MP68P56378 58 aa4.54□□□□□ -1.68
VIPAS39-207ENST00000555854 SPINK7P58062 85 aa4.54□□□□□ -1.68
VIPAS39-207ENST00000555854 Q8N9L7 120 aa4.54□□□□□ -1.68
VIPAS39-207ENST00000555854 C8orf17Q9NRJ1 99 aa4.54□□□□□ -1.68
VIPAS39-207ENST00000555854 K7EQZ3 153 aa4.53□□□□□ -1.68
VIPAS39-207ENST00000555854 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
VIPAS39-207ENST00000555854 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
VIPAS39-207ENST00000555854 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
VIPAS39-207ENST00000555854 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
VIPAS39-207ENST00000555854 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
VIPAS39-207ENST00000555854 CASC2Q6XLA1 102 aa4.51□□□□□ -1.69
VIPAS39-207ENST00000555854 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
VIPAS39-207ENST00000555854 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
VIPAS39-207ENST00000555854 WFDC13Q8IUB5 93 aa4.5□□□□□ -1.69
VIPAS39-207ENST00000555854 SPANXA2-OT1Q8N9U9 137 aa4.48□□□□□ -1.69
VIPAS39-207ENST00000555854 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
VIPAS39-207ENST00000555854 CYP4F30PQ9H0H9 118 aa4.47□□□□□ -1.69
VIPAS39-207ENST00000555854 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
VIPAS39-207ENST00000555854 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
VIPAS39-207ENST00000555854 H0Y9P7 68 aa4.43□□□□□ -1.7
VIPAS39-207ENST00000555854 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
VIPAS39-207ENST00000555854 V9GYY9 64 aa4.42□□□□□ -1.7
VIPAS39-207ENST00000555854 KRTAP19-6Q3LI70 58 aa4.41□□□□□ -1.7
VIPAS39-207ENST00000555854 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
VIPAS39-207ENST00000555854 Q5W150 140 aa4.4□□□□□ -1.71
VIPAS39-207ENST00000555854 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
VIPAS39-207ENST00000555854 Q1T7F1 81 aa4.37□□□□□ -1.71
VIPAS39-207ENST00000555854 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
VIPAS39-207ENST00000555854 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
VIPAS39-207ENST00000555854 NDUFS5O43920 106 aa4.36□□□□□ -1.71
VIPAS39-207ENST00000555854 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
VIPAS39-207ENST00000555854 C7orf65Q6ZTY9 151 aa4.35□□□□□ -1.71
VIPAS39-207ENST00000555854 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.72
VIPAS39-207ENST00000555854 NEBP20929 6669 aa4.34□□□□□ -1.72
VIPAS39-207ENST00000555854 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
VIPAS39-207ENST00000555854 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
VIPAS39-207ENST00000555854 ACYP2P14621 99 aa4.27□□□□□ -1.73
VIPAS39-207ENST00000555854 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
VIPAS39-207ENST00000555854 COA5Q86WW8 74 aa4.25□□□□□ -1.73
VIPAS39-207ENST00000555854 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
VIPAS39-207ENST00000555854 MT1BP07438 61 aa4.23□□□□□ -1.73
VIPAS39-207ENST00000555854 LCA10Q71F78 164 aa4.22□□□□□ -1.73
VIPAS39-207ENST00000555854 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
VIPAS39-207ENST00000555854 S4R3F8 94 aa4.21□□□□□ -1.74
VIPAS39-207ENST00000555854 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
VIPAS39-207ENST00000555854 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
VIPAS39-207ENST00000555854 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
VIPAS39-207ENST00000555854 A8MUN3 132 aa4.18□□□□□ -1.74
VIPAS39-207ENST00000555854 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
VIPAS39-207ENST00000555854 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
VIPAS39-207ENST00000555854 KMT2DO14686 5537 aa4.17□□□□□ -1.74
VIPAS39-207ENST00000555854 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
VIPAS39-207ENST00000555854 PRR15LQ9BU68 103 aa4.16□□□□□ -1.74
VIPAS39-207ENST00000555854 CHKB-CPT1BH3BT56 60 aa4.15□□□□□ -1.75
VIPAS39-207ENST00000555854 PSPHP1O15172 72 aa4.15□□□□□ -1.75
VIPAS39-207ENST00000555854 Q5VV11 94 aa4.15□□□□□ -1.75
VIPAS39-207ENST00000555854 CSAG1Q6PB30 78 aa4.15□□□□□ -1.75
VIPAS39-207ENST00000555854 SPTSSBQ8NFR3 76 aa4.14□□□□□ -1.75
VIPAS39-207ENST00000555854 A6NN06 94 aa4.12□□□□□ -1.75
VIPAS39-207ENST00000555854 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
VIPAS39-207ENST00000555854 A6NED7 52 aa4.09□□□□□ -1.75
VIPAS39-207ENST00000555854 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
VIPAS39-207ENST00000555854 A0A1B0GU69 56 aa4.05□□□□□ -1.76
VIPAS39-207ENST00000555854 SEC61GP60059 68 aa4.05□□□□□ -1.76
VIPAS39-207ENST00000555854 UQCR11O14957 56 aa4.02□□□□□ -1.77
VIPAS39-207ENST00000555854 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
VIPAS39-207ENST00000555854 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
VIPAS39-207ENST00000555854 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
VIPAS39-207ENST00000555854 H0YAA0 97 aa4□□□□□ -1.77
VIPAS39-207ENST00000555854 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
VIPAS39-207ENST00000555854 MT1XP80297 61 aa3.95□□□□□ -1.78
VIPAS39-207ENST00000555854 ADM2Q7Z4H4 148 aa3.95□□□□□ -1.78
VIPAS39-207ENST00000555854 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
VIPAS39-207ENST00000555854 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
VIPAS39-207ENST00000555854 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
VIPAS39-207ENST00000555854 P0C880 135 aa3.9□□□□□ -1.79
VIPAS39-207ENST00000555854 A0A1B0GU33 70 aa3.87□□□□□ -1.79
VIPAS39-207ENST00000555854 A8MU10 97 aa3.86□□□□□ -1.79
VIPAS39-207ENST00000555854 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
VIPAS39-207ENST00000555854 K7ERS5 55 aa3.83□□□□□ -1.8
VIPAS39-207ENST00000555854 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
VIPAS39-207ENST00000555854 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
VIPAS39-207ENST00000555854 R4GN34 69 aa3.83□□□□□ -1.8
VIPAS39-207ENST00000555854 M0QZ58 72 aa3.82□□□□□ -1.8
VIPAS39-207ENST00000555854 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
VIPAS39-207ENST00000555854 SPRR2EP22531 72 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms