RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
TRAPPC6B-205ENST00000555269 C1orf64Q8NEQ6 169 aa5.85□□□□□ -1.47
TRAPPC6B-205ENST00000555269 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
TRAPPC6B-205ENST00000555269 C5orf47Q569G3 176 aa5.82□□□□□ -1.48
TRAPPC6B-205ENST00000555269 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
TRAPPC6B-205ENST00000555269 A0A087WVE0 104 aa5.81□□□□□ -1.48
TRAPPC6B-205ENST00000555269 LINC00643Q86TS7 51 aa5.8□□□□□ -1.48
TRAPPC6B-205ENST00000555269 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
TRAPPC6B-205ENST00000555269 S4R3F8 94 aa5.78□□□□□ -1.48
TRAPPC6B-205ENST00000555269 LCA10Q71F78 164 aa5.77□□□□□ -1.49
TRAPPC6B-205ENST00000555269 UQCRQO14949 82 aa5.76□□□□□ -1.49
TRAPPC6B-205ENST00000555269 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
TRAPPC6B-205ENST00000555269 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC6B-205ENST00000555269 H0Y9P7 68 aa5.74□□□□□ -1.49
TRAPPC6B-205ENST00000555269 CSAG1Q6PB30 78 aa5.74□□□□□ -1.49
TRAPPC6B-205ENST00000555269 ATOX1O00244 68 aa5.69□□□□□ -1.5
TRAPPC6B-205ENST00000555269 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
TRAPPC6B-205ENST00000555269 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
TRAPPC6B-205ENST00000555269 J3QR89 54 aa5.67□□□□□ -1.5
TRAPPC6B-205ENST00000555269 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
TRAPPC6B-205ENST00000555269 OCR1Q9BZK8 76 aa5.67□□□□□ -1.5
TRAPPC6B-205ENST00000555269 KLKP1Q107X0 134 aa5.66□□□□□ -1.5
TRAPPC6B-205ENST00000555269 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
TRAPPC6B-205ENST00000555269 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
TRAPPC6B-205ENST00000555269 MP68P56378 58 aa5.61□□□□□ -1.51
TRAPPC6B-205ENST00000555269 SCGB1A1P11684 91 aa5.59□□□□□ -1.51
TRAPPC6B-205ENST00000555269 NDUFC1O43677 76 aa5.57□□□□□ -1.52
TRAPPC6B-205ENST00000555269 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
TRAPPC6B-205ENST00000555269 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
TRAPPC6B-205ENST00000555269 MT1BP07438 61 aa5.55□□□□□ -1.52
TRAPPC6B-205ENST00000555269 A8MUN3 132 aa5.54□□□□□ -1.52
TRAPPC6B-205ENST00000555269 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
TRAPPC6B-205ENST00000555269 H3BPC8 53 aa5.52□□□□□ -1.53
TRAPPC6B-205ENST00000555269 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
TRAPPC6B-205ENST00000555269 Q5VV11 94 aa5.51□□□□□ -1.53
TRAPPC6B-205ENST00000555269 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
TRAPPC6B-205ENST00000555269 K7ERU9 68 aa5.49□□□□□ -1.53
TRAPPC6B-205ENST00000555269 H0YAA0 97 aa5.47□□□□□ -1.53
TRAPPC6B-205ENST00000555269 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
TRAPPC6B-205ENST00000555269 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
TRAPPC6B-205ENST00000555269 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
TRAPPC6B-205ENST00000555269 DMAC1Q96GE9 116 aa5.44□□□□□ -1.54
TRAPPC6B-205ENST00000555269 TRAV7A0A075B6U4 112 aa5.43□□□□□ -1.54
TRAPPC6B-205ENST00000555269 A6NN06 94 aa5.43□□□□□ -1.54
TRAPPC6B-205ENST00000555269 SMIM20Q8N5G0 67 aa5.39□□□□□ -1.55
TRAPPC6B-205ENST00000555269 P0C880 135 aa5.38□□□□□ -1.55
TRAPPC6B-205ENST00000555269 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
TRAPPC6B-205ENST00000555269 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
TRAPPC6B-205ENST00000555269 ACYP2P14621 99 aa5.34□□□□□ -1.55
TRAPPC6B-205ENST00000555269 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
TRAPPC6B-205ENST00000555269 R4GN34 69 aa5.29□□□□□ -1.56
TRAPPC6B-205ENST00000555269 M0QZ58 72 aa5.28□□□□□ -1.56
TRAPPC6B-205ENST00000555269 C20orf197Q8N268 126 aa5.27□□□□□ -1.57
TRAPPC6B-205ENST00000555269 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
TRAPPC6B-205ENST00000555269 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
TRAPPC6B-205ENST00000555269 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
TRAPPC6B-205ENST00000555269 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
TRAPPC6B-205ENST00000555269 MT1XP80297 61 aa5.22□□□□□ -1.57
TRAPPC6B-205ENST00000555269 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
TRAPPC6B-205ENST00000555269 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
TRAPPC6B-205ENST00000555269 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
TRAPPC6B-205ENST00000555269 PCP4P48539 62 aa5.16□□□□□ -1.58
TRAPPC6B-205ENST00000555269 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
TRAPPC6B-205ENST00000555269 MUC12Q9UKN1 5478 aa5.14□□□□□ -1.59
TRAPPC6B-205ENST00000555269 COX7CP15954 63 aa5.12□□□□□ -1.59
TRAPPC6B-205ENST00000555269 KMT2DO14686 5537 aa5.11□□□□□ -1.59
TRAPPC6B-205ENST00000555269 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
TRAPPC6B-205ENST00000555269 NEBP20929 6669 aa5.1□□□□□ -1.59
TRAPPC6B-205ENST00000555269 COA5Q86WW8 74 aa5.09□□□□□ -1.59
TRAPPC6B-205ENST00000555269 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
TRAPPC6B-205ENST00000555269 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
TRAPPC6B-205ENST00000555269 H7BZZ5 65 aa5.04□□□□□ -1.6
TRAPPC6B-205ENST00000555269 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
TRAPPC6B-205ENST00000555269 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
TRAPPC6B-205ENST00000555269 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC6B-205ENST00000555269 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
TRAPPC6B-205ENST00000555269 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
TRAPPC6B-205ENST00000555269 ANAPC13Q9BS18 74 aa4.98□□□□□ -1.61
TRAPPC6B-205ENST00000555269 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
TRAPPC6B-205ENST00000555269 SEC61GP60059 68 aa4.94□□□□□ -1.62
TRAPPC6B-205ENST00000555269 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
TRAPPC6B-205ENST00000555269 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
TRAPPC6B-205ENST00000555269 SPATA8Q6RVD6 105 aa4.92□□□□□ -1.62
TRAPPC6B-205ENST00000555269 A0A0D9SG42 100 aa4.91□□□□□ -1.62
TRAPPC6B-205ENST00000555269 SPRR2EP22531 72 aa4.9□□□□□ -1.63
TRAPPC6B-205ENST00000555269 SPRR2BP35325 72 aa4.9□□□□□ -1.63
TRAPPC6B-205ENST00000555269 SPRR2AP35326 72 aa4.9□□□□□ -1.63
TRAPPC6B-205ENST00000555269 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
TRAPPC6B-205ENST00000555269 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
TRAPPC6B-205ENST00000555269 A0A1B0GU33 70 aa4.89□□□□□ -1.63
TRAPPC6B-205ENST00000555269 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
TRAPPC6B-205ENST00000555269 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
TRAPPC6B-205ENST00000555269 A0A1B0GU69 56 aa4.81□□□□□ -1.64
TRAPPC6B-205ENST00000555269 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
TRAPPC6B-205ENST00000555269 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
TRAPPC6B-205ENST00000555269 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
TRAPPC6B-205ENST00000555269 A8MU10 97 aa4.76□□□□□ -1.65
TRAPPC6B-205ENST00000555269 SPRR2DP22532 72 aa4.74□□□□□ -1.65
TRAPPC6B-205ENST00000555269 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC6B-205ENST00000555269 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms