RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
PPP4R3A-205ENST00000554684 ALMS1Q8TCU4 4167 aa8.19□□□□□ -1.1
PPP4R3A-205ENST00000554684 DNAH8Q96JB1 4490 aa8.17□□□□□ -1.1
PPP4R3A-205ENST00000554684 DNAH7Q8WXX0 4024 aa8.17□□□□□ -1.1
PPP4R3A-205ENST00000554684 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.11
PPP4R3A-205ENST00000554684 H0YAA0 97 aa8.14□□□□□ -1.11
PPP4R3A-205ENST00000554684 MYCBP2O75592 4640 aa8.14□□□□□ -1.11
PPP4R3A-205ENST00000554684 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
PPP4R3A-205ENST00000554684 P0C880 135 aa8.12□□□□□ -1.11
PPP4R3A-205ENST00000554684 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
PPP4R3A-205ENST00000554684 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.12
PPP4R3A-205ENST00000554684 PLAC4Q8WY50 150 aa8.09□□□□□ -1.12
PPP4R3A-205ENST00000554684 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
PPP4R3A-205ENST00000554684 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
PPP4R3A-205ENST00000554684 DYNC2H1Q8NCM8 4307 aaKnown RBP8.04□□□□□ -1.12
PPP4R3A-205ENST00000554684 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
PPP4R3A-205ENST00000554684 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
PPP4R3A-205ENST00000554684 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.12
PPP4R3A-205ENST00000554684 PKHD1P08F94 4074 aa8□□□□□ -1.13
PPP4R3A-205ENST00000554684 KRTAP17-1Q9BYP8 105 aa8□□□□□ -1.13
PPP4R3A-205ENST00000554684 RYR2Q92736 4967 aa7.98□□□□□ -1.13
PPP4R3A-205ENST00000554684 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
PPP4R3A-205ENST00000554684 LUZP6Q538Z0 58 aa7.92□□□□□ -1.14
PPP4R3A-205ENST00000554684 NDUFAF8A1L188 74 aa7.9□□□□□ -1.14
PPP4R3A-205ENST00000554684 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
PPP4R3A-205ENST00000554684 HERC2O95714 4834 aa7.89□□□□□ -1.15
PPP4R3A-205ENST00000554684 FRAS1Q86XX4 4008 aa7.85□□□□□ -1.15
PPP4R3A-205ENST00000554684 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
PPP4R3A-205ENST00000554684 EPPK1P58107 5090 aaKnown RBP7.76□□□□□ -1.17
PPP4R3A-205ENST00000554684 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
PPP4R3A-205ENST00000554684 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.17
PPP4R3A-205ENST00000554684 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
PPP4R3A-205ENST00000554684 KRTAP12-2P59991 146 aa7.69□□□□□ -1.18
PPP4R3A-205ENST00000554684 LRP2P98164 4655 aa7.66□□□□□ -1.18
PPP4R3A-205ENST00000554684 TNP1P09430 55 aa7.65□□□□□ -1.19
PPP4R3A-205ENST00000554684 BIRC6Q9NR09 4857 aa7.6□□□□□ -1.19
PPP4R3A-205ENST00000554684 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
PPP4R3A-205ENST00000554684 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
PPP4R3A-205ENST00000554684 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.2
PPP4R3A-205ENST00000554684 HSPG2P98160 4391 aa7.58□□□□□ -1.2
PPP4R3A-205ENST00000554684 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
PPP4R3A-205ENST00000554684 PCLOQ9Y6V0 5065 aa7.52□□□□□ -1.21
PPP4R3A-205ENST00000554684 PKD1P98161 4303 aa7.49□□□□□ -1.21
PPP4R3A-205ENST00000554684 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.21
PPP4R3A-205ENST00000554684 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
PPP4R3A-205ENST00000554684 LPAP08519 4548 aa7.35□□□□□ -1.23
PPP4R3A-205ENST00000554684 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
PPP4R3A-205ENST00000554684 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
PPP4R3A-205ENST00000554684 HERC1Q15751 4861 aa7.29□□□□□ -1.24
PPP4R3A-205ENST00000554684 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
PPP4R3A-205ENST00000554684 MT1HP80294 61 aa7.17□□□□□ -1.26
PPP4R3A-205ENST00000554684 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
PPP4R3A-205ENST00000554684 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.28
PPP4R3A-205ENST00000554684 MUC2Q02817 5179 aa7.08□□□□□ -1.28
PPP4R3A-205ENST00000554684 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
PPP4R3A-205ENST00000554684 MT2AP02795 61 aa6.99□□□□□ -1.29
PPP4R3A-205ENST00000554684 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
PPP4R3A-205ENST00000554684 MT1FP04733 61 aa6.94□□□□□ -1.3
PPP4R3A-205ENST00000554684 TNXBP22105 4242 aa6.92□□□□□ -1.3
PPP4R3A-205ENST00000554684 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
PPP4R3A-205ENST00000554684 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
PPP4R3A-205ENST00000554684 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
PPP4R3A-205ENST00000554684 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.34
PPP4R3A-205ENST00000554684 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
PPP4R3A-205ENST00000554684 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
PPP4R3A-205ENST00000554684 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
PPP4R3A-205ENST00000554684 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
PPP4R3A-205ENST00000554684 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
PPP4R3A-205ENST00000554684 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
PPP4R3A-205ENST00000554684 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
PPP4R3A-205ENST00000554684 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
PPP4R3A-205ENST00000554684 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
PPP4R3A-205ENST00000554684 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
PPP4R3A-205ENST00000554684 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
PPP4R3A-205ENST00000554684 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
PPP4R3A-205ENST00000554684 MT1BP07438 61 aa6.34□□□□□ -1.4
PPP4R3A-205ENST00000554684 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
PPP4R3A-205ENST00000554684 LCE2BO14633 110 aa6.3□□□□□ -1.4
PPP4R3A-205ENST00000554684 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
PPP4R3A-205ENST00000554684 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.4
PPP4R3A-205ENST00000554684 MT1XP80297 61 aa6.22□□□□□ -1.41
PPP4R3A-205ENST00000554684 USH2AO75445 5202 aa6.21□□□□□ -1.42
PPP4R3A-205ENST00000554684 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
PPP4R3A-205ENST00000554684 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
PPP4R3A-205ENST00000554684 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
PPP4R3A-205ENST00000554684 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
PPP4R3A-205ENST00000554684 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
PPP4R3A-205ENST00000554684 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
PPP4R3A-205ENST00000554684 INE1O15225 51 aa6.06□□□□□ -1.44
PPP4R3A-205ENST00000554684 OBSCNQ5VST9 7968 aa6.03□□□□□ -1.44
PPP4R3A-205ENST00000554684 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
PPP4R3A-205ENST00000554684 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-205ENST00000554684 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
PPP4R3A-205ENST00000554684 SPRR2EP22531 72 aa5.83□□□□□ -1.48
PPP4R3A-205ENST00000554684 SPRR2BP35325 72 aa5.83□□□□□ -1.48
PPP4R3A-205ENST00000554684 SPRR2AP35326 72 aa5.83□□□□□ -1.48
PPP4R3A-205ENST00000554684 KMT2DO14686 5537 aa5.78□□□□□ -1.48
PPP4R3A-205ENST00000554684 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
PPP4R3A-205ENST00000554684 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
PPP4R3A-205ENST00000554684 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms