RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
ATXN3-230ENST00000554673 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.91
ATXN3-230ENST00000554673 J3KT08 172 aa3.09□□□□□ -1.91
ATXN3-230ENST00000554673 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
ATXN3-230ENST00000554673 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
ATXN3-230ENST00000554673 LIMD2Q9BT23 127 aa3.09□□□□□ -1.91
ATXN3-230ENST00000554673 hDV103S1A0JD37 113 aa3.08□□□□□ -1.92
ATXN3-230ENST00000554673 C20orf166-AS1Q96NR2 134 aa3.08□□□□□ -1.92
ATXN3-230ENST00000554673 MRPL34Q9BQ48 92 aaKnown RBP3.08□□□□□ -1.92
ATXN3-230ENST00000554673 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
ATXN3-230ENST00000554673 COX7CP15954 63 aa3.06□□□□□ -1.92
ATXN3-230ENST00000554673 LINC00313P59037 77 aa3.06□□□□□ -1.92
ATXN3-230ENST00000554673 KLKP1Q107X0 134 aa3.06□□□□□ -1.92
ATXN3-230ENST00000554673 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
ATXN3-230ENST00000554673 MP68P56378 58 aa3.05□□□□□ -1.92
ATXN3-230ENST00000554673 SNURFQ9Y675 71 aa3.05□□□□□ -1.92
ATXN3-230ENST00000554673 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
ATXN3-230ENST00000554673 ATOX1O00244 68 aa3.04□□□□□ -1.92
ATXN3-230ENST00000554673 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
ATXN3-230ENST00000554673 H7BZZ5 65 aa3.03□□□□□ -1.92
ATXN3-230ENST00000554673 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
ATXN3-230ENST00000554673 FP248Q71RG6 208 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-230ENST00000554673 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
ATXN3-230ENST00000554673 C20orf197Q8N268 126 aa3.02□□□□□ -1.93
ATXN3-230ENST00000554673 H0Y9P7 68 aa3.01□□□□□ -1.93
ATXN3-230ENST00000554673 NDUFB1O75438 58 aa3.01□□□□□ -1.93
ATXN3-230ENST00000554673 UQCRQO14949 82 aa3□□□□□ -1.93
ATXN3-230ENST00000554673 HRES1P13985 223 aa3□□□□□ -1.93
ATXN3-230ENST00000554673 TRAV22A0A0B4J277 110 aa2.99□□□□□ -1.93
ATXN3-230ENST00000554673 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
ATXN3-230ENST00000554673 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
ATXN3-230ENST00000554673 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
ATXN3-230ENST00000554673 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
ATXN3-230ENST00000554673 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
ATXN3-230ENST00000554673 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
ATXN3-230ENST00000554673 C1orf64Q8NEQ6 169 aa2.96□□□□□ -1.94
ATXN3-230ENST00000554673 FLGP20930 4061 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-230ENST00000554673 SPINK7P58062 85 aa2.94□□□□□ -1.94
ATXN3-230ENST00000554673 SMIM20Q8N5G0 67 aa2.94□□□□□ -1.94
ATXN3-230ENST00000554673 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
ATXN3-230ENST00000554673 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
ATXN3-230ENST00000554673 SPANXA2-OT1Q8N9U9 137 aa2.92□□□□□ -1.94
ATXN3-230ENST00000554673 FAM236DA0A1B0GTK5 79 aa2.91□□□□□ -1.94
ATXN3-230ENST00000554673 FAM236CP0DP71 79 aa2.91□□□□□ -1.94
ATXN3-230ENST00000554673 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
ATXN3-230ENST00000554673 H3BPC8 53 aa2.9□□□□□ -1.95
ATXN3-230ENST00000554673 MUC2Q02817 5179 aa2.89□□□□□ -1.95
ATXN3-230ENST00000554673 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
ATXN3-230ENST00000554673 DMAC1Q96GE9 116 aa2.88□□□□□ -1.95
ATXN3-230ENST00000554673 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
ATXN3-230ENST00000554673 ADM2Q7Z4H4 148 aa2.87□□□□□ -1.95
ATXN3-230ENST00000554673 TMEM258P61165 79 aa2.86□□□□□ -1.95
ATXN3-230ENST00000554673 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
ATXN3-230ENST00000554673 A8MUN3 132 aa2.85□□□□□ -1.95
ATXN3-230ENST00000554673 K7ERS5 55 aa2.85□□□□□ -1.95
ATXN3-230ENST00000554673 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
ATXN3-230ENST00000554673 ATP11AUNQ6ZP68 121 aa2.85□□□□□ -1.95
ATXN3-230ENST00000554673 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
ATXN3-230ENST00000554673 COA5Q86WW8 74 aa2.83□□□□□ -1.96
ATXN3-230ENST00000554673 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
ATXN3-230ENST00000554673 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
ATXN3-230ENST00000554673 NDUFC1O43677 76 aa2.82□□□□□ -1.96
ATXN3-230ENST00000554673 MT1HP80294 61 aa2.81□□□□□ -1.96
ATXN3-230ENST00000554673 LCA10Q71F78 164 aa2.81□□□□□ -1.96
ATXN3-230ENST00000554673 SERP1Q9Y6X1 66 aa2.79□□□□□ -1.96
ATXN3-230ENST00000554673 A6NED7 52 aa2.78□□□□□ -1.96
ATXN3-230ENST00000554673 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-230ENST00000554673 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
ATXN3-230ENST00000554673 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
ATXN3-230ENST00000554673 A8MU10 97 aa2.75□□□□□ -1.97
ATXN3-230ENST00000554673 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
ATXN3-230ENST00000554673 P0C880 135 aa2.73□□□□□ -1.97
ATXN3-230ENST00000554673 MT2AP02795 61 aa2.72□□□□□ -1.97
ATXN3-230ENST00000554673 MT1FP04733 61 aa2.72□□□□□ -1.97
ATXN3-230ENST00000554673 ACYP2P14621 99 aa2.72□□□□□ -1.97
ATXN3-230ENST00000554673 S4R3F8 94 aa2.72□□□□□ -1.97
ATXN3-230ENST00000554673 Q5VV11 94 aa2.71□□□□□ -1.98
ATXN3-230ENST00000554673 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
ATXN3-230ENST00000554673 Q1T7F1 81 aa2.69□□□□□ -1.98
ATXN3-230ENST00000554673 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
ATXN3-230ENST00000554673 A0A1B0GU33 70 aa2.68□□□□□ -1.98
ATXN3-230ENST00000554673 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
ATXN3-230ENST00000554673 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
ATXN3-230ENST00000554673 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
ATXN3-230ENST00000554673 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
ATXN3-230ENST00000554673 H0YAA0 97 aa2.64□□□□□ -1.99
ATXN3-230ENST00000554673 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
ATXN3-230ENST00000554673 CHKB-CPT1BH3BT56 60 aa2.62□□□□□ -1.99
ATXN3-230ENST00000554673 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
ATXN3-230ENST00000554673 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
ATXN3-230ENST00000554673 CSAG1Q6PB30 78 aa2.61□□□□□ -1.99
ATXN3-230ENST00000554673 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
ATXN3-230ENST00000554673 R4GN34 69 aa2.61□□□□□ -1.99
ATXN3-230ENST00000554673 MT1BP07438 61 aa2.6□□□□□ -1.99
ATXN3-230ENST00000554673 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
ATXN3-230ENST00000554673 A0A1B0GU69 56 aa2.56□□□□□ -2
ATXN3-230ENST00000554673 KRTAP12-1P59990 96 aa2.55□□□□□ -2
ATXN3-230ENST00000554673 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
ATXN3-230ENST00000554673 KRTAP12-2P59991 146 aa2.54□□□□□ -2
ATXN3-230ENST00000554673 KRTAP10-10P60014 251 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms