RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
SLIRP-203ENST00000554074 ATOX1O00244 68 aa3.19□□□□□ -1.9
SLIRP-203ENST00000554074 Q5W150 140 aa3.19□□□□□ -1.9
SLIRP-203ENST00000554074 TRAV22A0A0B4J277 110 aa3.17□□□□□ -1.9
SLIRP-203ENST00000554074 SMIM20Q8N5G0 67 aa3.17□□□□□ -1.9
SLIRP-203ENST00000554074 A0A087WVE0 104 aa3.16□□□□□ -1.9
SLIRP-203ENST00000554074 LOC101927531A0A1B0GV80 90 aa3.16□□□□□ -1.9
SLIRP-203ENST00000554074 IGKV2-30P06310 120 aa3.16□□□□□ -1.9
SLIRP-203ENST00000554074 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
SLIRP-203ENST00000554074 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
SLIRP-203ENST00000554074 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
SLIRP-203ENST00000554074 H3BPC8 53 aa3.15□□□□□ -1.91
SLIRP-203ENST00000554074 MT-ATP8P03928 68 aa3.15□□□□□ -1.91
SLIRP-203ENST00000554074 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
SLIRP-203ENST00000554074 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
SLIRP-203ENST00000554074 OCR1Q9BZK8 76 aa3.15□□□□□ -1.91
SLIRP-203ENST00000554074 MP68P56378 58 aa3.14□□□□□ -1.91
SLIRP-203ENST00000554074 H0Y9P7 68 aa3.13□□□□□ -1.91
SLIRP-203ENST00000554074 CYP4F30PQ9H0H9 118 aa3.13□□□□□ -1.91
SLIRP-203ENST00000554074 C1orf64Q8NEQ6 169 aa3.11□□□□□ -1.91
SLIRP-203ENST00000554074 TRAV7A0A075B6U4 112 aa3.1□□□□□ -1.91
SLIRP-203ENST00000554074 FAM236AA0A1B0GUQ0 79 aa3.1□□□□□ -1.91
SLIRP-203ENST00000554074 FAM236BA0A1B0GV22 79 aa3.1□□□□□ -1.91
SLIRP-203ENST00000554074 LINC00208Q96KT6 92 aa3.09□□□□□ -1.91
SLIRP-203ENST00000554074 A8MUN3 132 aa3.08□□□□□ -1.92
SLIRP-203ENST00000554074 C4orf26Q17RF5 130 aa3.08□□□□□ -1.92
SLIRP-203ENST00000554074 NEBP20929 6669 aa3.07□□□□□ -1.92
SLIRP-203ENST00000554074 SERP2Q8N6R1 65 aa3.05□□□□□ -1.92
SLIRP-203ENST00000554074 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
SLIRP-203ENST00000554074 KRTAP3-1Q9BYR8 98 aa3.03□□□□□ -1.92
SLIRP-203ENST00000554074 KLKP1Q107X0 134 aa3.02□□□□□ -1.93
SLIRP-203ENST00000554074 S4R3F8 94 aa3.02□□□□□ -1.93
SLIRP-203ENST00000554074 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
SLIRP-203ENST00000554074 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
SLIRP-203ENST00000554074 COX7CP15954 63 aa3□□□□□ -1.93
SLIRP-203ENST00000554074 CSAG1Q6PB30 78 aa3□□□□□ -1.93
SLIRP-203ENST00000554074 DMAC1Q96GE9 116 aa3□□□□□ -1.93
SLIRP-203ENST00000554074 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
SLIRP-203ENST00000554074 NDUFC1O43677 76 aa2.99□□□□□ -1.93
SLIRP-203ENST00000554074 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
SLIRP-203ENST00000554074 SPANXA2-OT1Q8N9U9 137 aa2.99□□□□□ -1.93
SLIRP-203ENST00000554074 MT1BP07438 61 aa2.98□□□□□ -1.93
SLIRP-203ENST00000554074 Q5VV11 94 aa2.98□□□□□ -1.93
SLIRP-203ENST00000554074 LCA10Q71F78 164 aa2.98□□□□□ -1.93
SLIRP-203ENST00000554074 C20orf197Q8N268 126 aa2.98□□□□□ -1.93
SLIRP-203ENST00000554074 A6NN06 94 aa2.97□□□□□ -1.93
SLIRP-203ENST00000554074 ACYP2P14621 99 aa2.97□□□□□ -1.93
SLIRP-203ENST00000554074 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
SLIRP-203ENST00000554074 SNURFQ9Y675 71 aa2.96□□□□□ -1.94
SLIRP-203ENST00000554074 H0YAA0 97 aa2.95□□□□□ -1.94
SLIRP-203ENST00000554074 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
SLIRP-203ENST00000554074 SPTSSBQ8NFR3 76 aa2.94□□□□□ -1.94
SLIRP-203ENST00000554074 CRIPTQ9P021 101 aa2.94□□□□□ -1.94
SLIRP-203ENST00000554074 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
SLIRP-203ENST00000554074 H7BZZ5 65 aa2.9□□□□□ -1.95
SLIRP-203ENST00000554074 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
SLIRP-203ENST00000554074 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
SLIRP-203ENST00000554074 ATP5EP56381 51 aaPredicted RBP2.89□□□□□ -1.95
SLIRP-203ENST00000554074 KMT2DO14686 5537 aa2.88□□□□□ -1.95
SLIRP-203ENST00000554074 CCDC179H3BU77 68 aa2.85□□□□□ -1.95
SLIRP-203ENST00000554074 COA5Q86WW8 74 aa2.85□□□□□ -1.95
SLIRP-203ENST00000554074 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
SLIRP-203ENST00000554074 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
SLIRP-203ENST00000554074 CYSTM1Q9H1C7 97 aa2.84□□□□□ -1.95
SLIRP-203ENST00000554074 TMEM258P61165 79 aa2.83□□□□□ -1.96
SLIRP-203ENST00000554074 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
SLIRP-203ENST00000554074 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
SLIRP-203ENST00000554074 SEC61GP60059 68 aa2.8□□□□□ -1.96
SLIRP-203ENST00000554074 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
SLIRP-203ENST00000554074 R4GN34 69 aa2.79□□□□□ -1.96
SLIRP-203ENST00000554074 M0QZ58 72 aa2.78□□□□□ -1.96
SLIRP-203ENST00000554074 MT1XP80297 61 aa2.78□□□□□ -1.96
SLIRP-203ENST00000554074 P0C880 135 aa2.77□□□□□ -1.97
SLIRP-203ENST00000554074 PLAC4Q8WY50 150 aa2.77□□□□□ -1.97
SLIRP-203ENST00000554074 SERP1Q9Y6X1 66 aa2.77□□□□□ -1.97
SLIRP-203ENST00000554074 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
SLIRP-203ENST00000554074 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
SLIRP-203ENST00000554074 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
SLIRP-203ENST00000554074 KRTAP23-1A1A580 65 aa2.74□□□□□ -1.97
SLIRP-203ENST00000554074 SPRR2EP22531 72 aa2.73□□□□□ -1.97
SLIRP-203ENST00000554074 SPRR2BP35325 72 aa2.73□□□□□ -1.97
SLIRP-203ENST00000554074 SPRR2AP35326 72 aa2.73□□□□□ -1.97
SLIRP-203ENST00000554074 PCP4P48539 62 aa2.73□□□□□ -1.97
SLIRP-203ENST00000554074 KRTAP15-1Q3LI76 137 aa2.73□□□□□ -1.97
SLIRP-203ENST00000554074 KRTAP8-1Q8IUC2 63 aa2.73□□□□□ -1.97
SLIRP-203ENST00000554074 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
SLIRP-203ENST00000554074 A0A1B0GU69 56 aa2.71□□□□□ -1.98
SLIRP-203ENST00000554074 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
SLIRP-203ENST00000554074 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
SLIRP-203ENST00000554074 A0A1B0GU33 70 aa2.69□□□□□ -1.98
SLIRP-203ENST00000554074 KRTAP2-2Q9BYT5 123 aa2.69□□□□□ -1.98
SLIRP-203ENST00000554074 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
SLIRP-203ENST00000554074 V9GYY9 64 aa2.69□□□□□ -1.98
SLIRP-203ENST00000554074 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
SLIRP-203ENST00000554074 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
SLIRP-203ENST00000554074 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
SLIRP-203ENST00000554074 SMIM26A0A096LP01 95 aa2.65□□□□□ -1.99
SLIRP-203ENST00000554074 SPRR2DP22532 72 aa2.64□□□□□ -1.99
SLIRP-203ENST00000554074 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-203ENST00000554074 Q1T7F1 81 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms